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The map label for this gene is yjcD [H]

Identifier: 238892555

GI number: 238892555

Start: 338450

End: 339799

Strand: Direct

Name: yjcD [H]

Synonym: KP1_0328

Alternate gene names: 238892555

Gene position: 338450-339799 (Clockwise)

Preceding gene: 238892554

Following gene: 238892556

Centisome position: 6.45

GC content: 60.59

Gene sequence:

>1350_bases
ATGTCTACGCCTTCAGCGCGTACCGGCGGTTCATTGGACGCCTGGTTTAAAATTTCGGCGCGCGGCAGCACCGTGCGTCA
GGAGATTGTTGCAGGTCTTACTACCTTTCTGGCGATGGTGTACTCCGTCATCGTGGTGCCGGGCATGCTCGGTAAAGCGG
GCTTCCCGCCGGCCGCGGTGTTTGTCTCGACCTGTCTGGTAGCGGGCGTTGGCTCGCTGGCGATGGGATTATGGGCGAAT
CTGCCGATGGCGATCGGTTGCGCTATCTCGTTGACCGCCTTCACCGCCTTCAGCCTGGTGCTGGGGCAGCAGATCAGTAT
TCCGGTAGCCCTCGGCGCAGTATTCCTGATGGGGGTCCTGTTTACGGTGATCTCGGCAACCGGCATCCGCAGCTGGATCT
TGCGTAACCTGCCGCAGGGCGTGGCGCACGGTACCGGGATCGGCATTGGCCTGTTCCTGCTGCTGATCGCCGCCAACGGC
GTTGGTCTGGTGATCAAAAACCCGCTGGACGGTTTGCCGGTGGCGTTGGGCAACTTTGACAGTTTCCCGGTGGTGATGTC
GCTGATTGGCCTCGCGGTGATCATTGGTCTGGAAAAAATGAAGGTGCCGGGCGGCATTCTGCTGACCATTATCGGCGTGT
CGATTGTCGGCCTGATTTTCGATCCCAACGTCCATTTCTCCGGCATTTTCGCTATGCCATCCCTGAGCGATGGCCAGGGT
AATTCCCTGATCGGCAGCCTGGATATCGTCGGCGCGCTCAACCCGGTCGTGCTGCCAAGCGTGCTGGCGCTGGTGATGAC
GGCGGTCTTTGACGCCACCGGTACCATCCGTGCCGTGGCTGGCCAGGCGAACCTGCTGGATAAGGACGGACAGATCATCA
ACGGCGGTAAAGCGCTGACCACCGACTCCCTGAGCAGCGTCTTCTCCGGTTTAGTCGGGGCGGCGCCGGCGGCGGTTTAT
ATCGAATCGGCGGCGGGTACCGCGGCCGGTGGTAAAACCGGTCTGACCGCAGTGACGGTCGGTGTCCTGTTCCTGCTGAT
CCTGTTCCTCTCCCCGCTTTCTTATCTGGTGCCGGCCTACGCGACCGCGCCGGCGCTGATGTACGTTGGCCTGCTGATGC
TGAGCAACGTGGCGAAAATCGATTTCAATGACTTTGTTGACGCGATGGCTGGCCTGATCACCGCGGTGTTTATCGTGCTG
ACCTGTAACATCGTGACGGGCATCATGATCGGTTTCGCGACCCTGGTTATTGGCCGTCTGGTCTCCGGCGAGTGGCGCAA
ACTGAACCTCGGCACGGTGATTATCGCTGTGGCGCTGGTGGTGTTCTACGCCGGCGGCTGGGCGATTTAA

Upstream 100 bases:

>100_bases
CTGGCGCTGCGATTCGGTACATGGAGATCGCGTTTAACTGGCAGTGGACGGTCCACCACGCATATCAACGAACGATAAAA
ATTTTCAGGGGAAGTTTTCT

Downstream 100 bases:

>100_bases
ACCCTTCGTGCTCCTCACGGGCGGCTCAGGCCGCCCGTTTTATTTTTAAGCCACATCCTGTTTCCATTTGCGTTAATCTG
GGTAGCGTATGATTCACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MSTPSARTGGSLDAWFKISARGSTVRQEIVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVSTCLVAGVGSLAMGLWAN
LPMAIGCAISLTAFTAFSLVLGQQISIPVALGAVFLMGVLFTVISATGIRSWILRNLPQGVAHGTGIGIGLFLLLIAANG
VGLVIKNPLDGLPVALGNFDSFPVVMSLIGLAVIIGLEKMKVPGGILLTIIGVSIVGLIFDPNVHFSGIFAMPSLSDGQG
NSLIGSLDIVGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIINGGKALTTDSLSSVFSGLVGAAPAAVY
IESAAGTAAGGKTGLTAVTVGVLFLLILFLSPLSYLVPAYATAPALMYVGLLMLSNVAKIDFNDFVDAMAGLITAVFIVL
TCNIVTGIMIGFATLVIGRLVSGEWRKLNLGTVIIAVALVVFYAGGWAI

Sequences:

>Translated_449_residues
MSTPSARTGGSLDAWFKISARGSTVRQEIVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVSTCLVAGVGSLAMGLWAN
LPMAIGCAISLTAFTAFSLVLGQQISIPVALGAVFLMGVLFTVISATGIRSWILRNLPQGVAHGTGIGIGLFLLLIAANG
VGLVIKNPLDGLPVALGNFDSFPVVMSLIGLAVIIGLEKMKVPGGILLTIIGVSIVGLIFDPNVHFSGIFAMPSLSDGQG
NSLIGSLDIVGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIINGGKALTTDSLSSVFSGLVGAAPAAVY
IESAAGTAAGGKTGLTAVTVGVLFLLILFLSPLSYLVPAYATAPALMYVGLLMLSNVAKIDFNDFVDAMAGLITAVFIVL
TCNIVTGIMIGFATLVIGRLVSGEWRKLNLGTVIIAVALVVFYAGGWAI
>Mature_448_residues
STPSARTGGSLDAWFKISARGSTVRQEIVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVSTCLVAGVGSLAMGLWANL
PMAIGCAISLTAFTAFSLVLGQQISIPVALGAVFLMGVLFTVISATGIRSWILRNLPQGVAHGTGIGIGLFLLLIAANGV
GLVIKNPLDGLPVALGNFDSFPVVMSLIGLAVIIGLEKMKVPGGILLTIIGVSIVGLIFDPNVHFSGIFAMPSLSDGQGN
SLIGSLDIVGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIINGGKALTTDSLSSVFSGLVGAAPAAVYI
ESAAGTAAGGKTGLTAVTVGVLFLLILFLSPLSYLVPAYATAPALMYVGLLMLSNVAKIDFNDFVDAMAGLITAVFIVLT
CNIVTGIMIGFATLVIGRLVSGEWRKLNLGTVIIAVALVVFYAGGWAI

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790499, Length=449, Percent_Identity=93.3184855233853, Blast_Score=818, Evalue=0.0,
Organism=Escherichia coli, GI48994909, Length=450, Percent_Identity=82.2222222222222, Blast_Score=708, Evalue=0.0,
Organism=Escherichia coli, GI87082309, Length=431, Percent_Identity=40.6032482598608, Blast_Score=304, Evalue=8e-84,
Organism=Escherichia coli, GI1790150, Length=432, Percent_Identity=36.1111111111111, Blast_Score=254, Evalue=7e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 45664; Mature: 45533

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPSARTGGSLDAWFKISARGSTVRQEIVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAV
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
FVSTCLVAGVGSLAMGLWANLPMAIGCAISLTAFTAFSLVLGQQISIPVALGAVFLMGVL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FTVISATGIRSWILRNLPQGVAHGTGIGIGLFLLLIAANGVGLVIKNPLDGLPVALGNFD
HHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCC
SFPVVMSLIGLAVIIGLEKMKVPGGILLTIIGVSIVGLIFDPNVHFSGIFAMPSLSDGQG
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
NSLIGSLDIVGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIINGGKALT
CCEEEHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCCCCCEECCCCCCC
TDSLSSVFSGLVGAAPAAVYIESAAGTAAGGKTGLTAVTVGVLFLLILFLSPLSYLVPAY
HHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAPALMYVGLLMLSNVAKIDFNDFVDAMAGLITAVFIVLTCNIVTGIMIGFATLVIGRL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSGEWRKLNLGTVIIAVALVVFYAGGWAI
HCCCCEEECHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STPSARTGGSLDAWFKISARGSTVRQEIVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAV
CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
FVSTCLVAGVGSLAMGLWANLPMAIGCAISLTAFTAFSLVLGQQISIPVALGAVFLMGVL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FTVISATGIRSWILRNLPQGVAHGTGIGIGLFLLLIAANGVGLVIKNPLDGLPVALGNFD
HHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCC
SFPVVMSLIGLAVIIGLEKMKVPGGILLTIIGVSIVGLIFDPNVHFSGIFAMPSLSDGQG
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
NSLIGSLDIVGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIINGGKALT
CCEEEHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCCCCCEECCCCCCC
TDSLSSVFSGLVGAAPAAVYIESAAGTAAGGKTGLTAVTVGVLFLLILFLSPLSYLVPAY
HHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ATAPALMYVGLLMLSNVAKIDFNDFVDAMAGLITAVFIVLTCNIVTGIMIGFATLVIGRL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSGEWRKLNLGTVIIAVALVVFYAGGWAI
HCCCCEEECHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]