| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is nadE [H]
Identifier: 238028323
GI number: 238028323
Start: 3153185
End: 3154870
Strand: Reverse
Name: nadE [H]
Synonym: bglu_1g27840
Alternate gene names: 238028323
Gene position: 3154870-3153185 (Counterclockwise)
Preceding gene: 238028326
Following gene: 238028322
Centisome position: 80.76
GC content: 69.99
Gene sequence:
>1686_bases ATGAAAACCCGTATCGCTCTCGCCCAACTCAACGTCACCGTCGGCGATTTCGCCGGTAACGTCGCCCGCATCGTCGAGGC CGCGCGCGCCGCGCACGACGATGGTGCGCAGCTGCTCGTCGCGCCGGAGCTCGCGTTGTCCGGGTATCCGCCCGAGGATC TGCTGCTGCGTCCGGCGTTCTACACCGAGGCGGCCGAGGCGCTGGCGCGGCTGGCCGAGTGCCTGAAGCCGTTCGAGGGG CTCGCGGTGCTGGTCGGCCATCCGCTGCGCACGCCCAGCGCCGATGGTAATGCAAACCGTCCGATCGGGCGCGGCGCGAC GCCGGTGGACACCTACAACGCGGCGTCGCTGCTCGTCGGCGGCGCGATCGCGGCCACCTATCGCAAGCAGGACCTGCCGA ACACCGAGGTGTTCGACGAGAAGCGCTACTTCGCCACCGATCCGCAGCCGTGCGTGTTCGAGCTGAACGGCACGCGCTTC GGCGTGATCATCTGCGAGGACGCCTGGCACGCCTCGGCCGCCCAGCTCGCGAAGGCCGCCGGCGCCGAGGTGCTGCTGGT GCCGAACGGCTCGCCGTATCACATGGACAAGGACGCGGTACGGGTCGGGATCGTGCGCGCGCGGATCCGCGAGACGGGGC TGCCGGTGGTCTACGTGAACCTGGTGGGCGGGCAGGACGAGCTCGTGTTCGACGGCGGCTCGTTCGTGCTCGACGGCGCG GGCGAGCTGGTCGCGCGCATGCCGCAGTTCGAGGCGGGCCACGCGATCGTCGAGTTCGACGGCGCGCGCCCGCTGCCGGG CGAGATCGCGGCGCCGCTGCCGGTCGAGGCGCAGGTCTACCGCGCGCTGGTGCTCGGCGTGCGCGACTATATCGGCAAGA ACGGCTTTCCCGGCGCGCTGATCGGCCTGTCGGGCGGCGTCGACTCGGCGCTGGTGCTGGCGGTGGCCTGCGACGCGCTC GGCCCCGAGCGGGTGCGCGCCGTGATGATGCCGTCGCGCTACACGGCCGACATTTCCACCACCGACGCGGCCGAGATGGC GCGCCGCGTGGGCGTGCGCTACGACGAGATCGCCATCGCGCCGATGTTCGACGCGTTTTGCGGCGCGCTCGCCGACGAGT TCGCCGGCCGCGACGAGGACGCCACCGAGGAGAACATCCAGGCGCGGATTCGCGGCACGCTGCTGATGGCGCTGTCTAAC AAGTTCGGCTCGATCGTGCTGACCACCGGCAACAAGAGCGAGATGGCGGTGGGCTACTGCACGCTGTACGGCGACATGGC GGGCGGCTTCGCCGTGATCAAGGACATCGCGAAGACGCTCGTCTATCGTCTCTGCCATTACCGCAACGCGGCCGCCGAGT TCGGCTCGACCGAGGTGATCCCGGCGCGCATCCTCAGCCGCGCGCCGTCGGCCGAGCTGCGCGAGAACCAGACCGACCAG GACAGCCTGCCGCCCTACGACGTGCTCGACGCGATCATGCGCATGTACATGGAAGAAGACCAGCCGCTCGCGGCGATCGT CGCGGCCGGCTACGACGAGGCCGACGTGACGCGCGTCACGCGTCTCATCAAGATCAACGAATACAAGCGGCGCCAGGCGC CGATCGGGATTCGCGTCACGCACCGCGCGTTCGGCCGCGACTGGCGCTACCCGATCACCTCGCGCTTCACCGAGCGTATC GACTGA
Upstream 100 bases:
>100_bases GTCAGAGATCCGTTTGGTTCGGCGCGCGCGACGCGGCGCGCACCGGTGATGCGCCCGCGGGCGCTCGTCACGCGAGCCGC GAGGCCGCGCAGATTCCGTC
Downstream 100 bases:
>100_bases CGGCGCGCCGCGCGTAGAATCCGTTCCAGTCATCCATTTACCGGAGCCTCATCATGAAACGCATTACCGCCATCATCAAA CCGTTCAAGCTCGACGAAGT
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolysing] [H]
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MKTRIALAQLNVTVGDFAGNVARIVEAARAAHDDGAQLLVAPELALSGYPPEDLLLRPAFYTEAAEALARLAECLKPFEG LAVLVGHPLRTPSADGNANRPIGRGATPVDTYNAASLLVGGAIAATYRKQDLPNTEVFDEKRYFATDPQPCVFELNGTRF GVIICEDAWHASAAQLAKAAGAEVLLVPNGSPYHMDKDAVRVGIVRARIRETGLPVVYVNLVGGQDELVFDGGSFVLDGA GELVARMPQFEAGHAIVEFDGARPLPGEIAAPLPVEAQVYRALVLGVRDYIGKNGFPGALIGLSGGVDSALVLAVACDAL GPERVRAVMMPSRYTADISTTDAAEMARRVGVRYDEIAIAPMFDAFCGALADEFAGRDEDATEENIQARIRGTLLMALSN KFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEFGSTEVIPARILSRAPSAELRENQTDQ DSLPPYDVLDAIMRMYMEEDQPLAAIVAAGYDEADVTRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERI D
Sequences:
>Translated_561_residues MKTRIALAQLNVTVGDFAGNVARIVEAARAAHDDGAQLLVAPELALSGYPPEDLLLRPAFYTEAAEALARLAECLKPFEG LAVLVGHPLRTPSADGNANRPIGRGATPVDTYNAASLLVGGAIAATYRKQDLPNTEVFDEKRYFATDPQPCVFELNGTRF GVIICEDAWHASAAQLAKAAGAEVLLVPNGSPYHMDKDAVRVGIVRARIRETGLPVVYVNLVGGQDELVFDGGSFVLDGA GELVARMPQFEAGHAIVEFDGARPLPGEIAAPLPVEAQVYRALVLGVRDYIGKNGFPGALIGLSGGVDSALVLAVACDAL GPERVRAVMMPSRYTADISTTDAAEMARRVGVRYDEIAIAPMFDAFCGALADEFAGRDEDATEENIQARIRGTLLMALSN KFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEFGSTEVIPARILSRAPSAELRENQTDQ DSLPPYDVLDAIMRMYMEEDQPLAAIVAAGYDEADVTRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERI D >Mature_561_residues MKTRIALAQLNVTVGDFAGNVARIVEAARAAHDDGAQLLVAPELALSGYPPEDLLLRPAFYTEAAEALARLAECLKPFEG LAVLVGHPLRTPSADGNANRPIGRGATPVDTYNAASLLVGGAIAATYRKQDLPNTEVFDEKRYFATDPQPCVFELNGTRF GVIICEDAWHASAAQLAKAAGAEVLLVPNGSPYHMDKDAVRVGIVRARIRETGLPVVYVNLVGGQDELVFDGGSFVLDGA GELVARMPQFEAGHAIVEFDGARPLPGEIAAPLPVEAQVYRALVLGVRDYIGKNGFPGALIGLSGGVDSALVLAVACDAL GPERVRAVMMPSRYTADISTTDAAEMARRVGVRYDEIAIAPMFDAFCGALADEFAGRDEDATEENIQARIRGTLLMALSN KFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEFGSTEVIPARILSRAPSAELRENQTDQ DSLPPYDVLDAIMRMYMEEDQPLAAIVAAGYDEADVTRVTRLIKINEYKRRQAPIGIRVTHRAFGRDWRYPITSRFTERI D
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR000132 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 60481; Mature: 60481
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRIALAQLNVTVGDFAGNVARIVEAARAAHDDGAQLLVAPELALSGYPPEDLLLRPAF CCCEEEEEEEEEEHHHHCCHHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCHHHEECCHH YTEAAEALARLAECLKPFEGLAVLVGHPLRTPSADGNANRPIGRGATPVDTYNAASLLVG HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH GAIAATYRKQDLPNTEVFDEKRYFATDPQPCVFELNGTRFGVIICEDAWHASAAQLAKAA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHC GAEVLLVPNGSPYHMDKDAVRVGIVRARIRETGLPVVYVNLVGGQDELVFDGGSFVLDGA CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCEEECCC GELVARMPQFEAGHAIVEFDGARPLPGEIAAPLPVEAQVYRALVLGVRDYIGKNGFPGAL HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE IGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAAEMARRVGVRYDEIAIA EEECCCCCHHHHHHHHHHCCCHHHHHEEECCCCEECCCCCCCHHHHHHHHCCCCHHEEEH PMFDAFCGALADEFAGRDEDATEENIQARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYC HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCEEEEEE TLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEFGSTEVIPARILSRAPSAELRENQTDQ EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHCCCCCC DSLPPYDVLDAIMRMYMEEDQPLAAIVAAGYDEADVTRVTRLIKINEYKRRQAPIGIRVT CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE HRAFGRDWRYPITSRFTERID HHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure MKTRIALAQLNVTVGDFAGNVARIVEAARAAHDDGAQLLVAPELALSGYPPEDLLLRPAF CCCEEEEEEEEEEHHHHCCHHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCHHHEECCHH YTEAAEALARLAECLKPFEGLAVLVGHPLRTPSADGNANRPIGRGATPVDTYNAASLLVG HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH GAIAATYRKQDLPNTEVFDEKRYFATDPQPCVFELNGTRFGVIICEDAWHASAAQLAKAA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHC GAEVLLVPNGSPYHMDKDAVRVGIVRARIRETGLPVVYVNLVGGQDELVFDGGSFVLDGA CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCEEECCC GELVARMPQFEAGHAIVEFDGARPLPGEIAAPLPVEAQVYRALVLGVRDYIGKNGFPGAL HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE IGLSGGVDSALVLAVACDALGPERVRAVMMPSRYTADISTTDAAEMARRVGVRYDEIAIA EEECCCCCHHHHHHHHHHCCCHHHHHEEECCCCEECCCCCCCHHHHHHHHCCCCHHEEEH PMFDAFCGALADEFAGRDEDATEENIQARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYC HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCEEEEEE TLYGDMAGGFAVIKDIAKTLVYRLCHYRNAAAEFGSTEVIPARILSRAPSAELRENQTDQ EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHCCCCCC DSLPPYDVLDAIMRMYMEEDQPLAAIVAAGYDEADVTRVTRLIKINEYKRRQAPIGIRVT CCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE HRAFGRDWRYPITSRFTERID HHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]