| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028302
Identifier: 238028302
GI number: 238028302
Start: 3132855
End: 3133235
Strand: Direct
Name: 238028302
Synonym: bglu_1g27630
Alternate gene names: NA
Gene position: 3132855-3133235 (Clockwise)
Preceding gene: 238028298
Following gene: 238028303
Centisome position: 80.2
GC content: 70.87
Gene sequence:
>381_bases ATGAAACCCGACACCGCGCACCGGTTCGACACCGAACTCGCTCCCCGCATCGCCGCGCGCATCGCGACGATGCTCGGTCC GCGCGTGCGCGTCGTCGCCGTACGCTACGGCGGCCACGGCCACCCGAGCCAGATCCACGTCGTCAGCACCACGCCCGTCC ACGTCCGCGGCTTCGACCATCCGCTCGACGTCACGCTGACCTGGGACGGCGACGAGATCGAGCGGCTCGTCGCCGACCAG GACGGCGCCCGCTTCGCGCGCTATCTCAACGCCCTGTCGTGCAAGCTGCCGGGCTGGGAAAGCGCGCGCGGCCTCGACTT CGGCTCGCGCACGCAGACCACGCCGCACGTGCTGCTCGGGGGACTCGATTTCGAAGCGTGA
Upstream 100 bases:
>100_bases TGATGCGCGCCACGAGCGCTGCGCGGCGGTCGCATGCTAGGATTTTCGAACACCGCGACGAAGCGACGCAACGCCCACCC GGGACCGCCACGCCTTCATC
Downstream 100 bases:
>100_bases GGCGCTCCGGCGGCCGCGAAGGCCGGCCGGGCCGCGTCACGCGCGCATCGGCCGCCGTCGTGATCGGAACGCCGGTGATA CACTCGGCCGATCCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKPDTAHRFDTELAPRIAARIATMLGPRVRVVAVRYGGHGHPSQIHVVSTTPVHVRGFDHPLDVTLTWDGDEIERLVADQ DGARFARYLNALSCKLPGWESARGLDFGSRTQTTPHVLLGGLDFEA
Sequences:
>Translated_126_residues MKPDTAHRFDTELAPRIAARIATMLGPRVRVVAVRYGGHGHPSQIHVVSTTPVHVRGFDHPLDVTLTWDGDEIERLVADQ DGARFARYLNALSCKLPGWESARGLDFGSRTQTTPHVLLGGLDFEA >Mature_126_residues MKPDTAHRFDTELAPRIAARIATMLGPRVRVVAVRYGGHGHPSQIHVVSTTPVHVRGFDHPLDVTLTWDGDEIERLVADQ DGARFARYLNALSCKLPGWESARGLDFGSRTQTTPHVLLGGLDFEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13866; Mature: 13866
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPDTAHRFDTELAPRIAARIATMLGPRVRVVAVRYGGHGHPSQIHVVSTTPVHVRGFDH CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCEEEECCCC PLDVTLTWDGDEIERLVADQDGARFARYLNALSCKLPGWESARGLDFGSRTQTTPHVLLG CEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE GLDFEA CCCCCC >Mature Secondary Structure MKPDTAHRFDTELAPRIAARIATMLGPRVRVVAVRYGGHGHPSQIHVVSTTPVHVRGFDH CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCEEEECCCC PLDVTLTWDGDEIERLVADQDGARFARYLNALSCKLPGWESARGLDFGSRTQTTPHVLLG CEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE GLDFEA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA