Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238028302

Identifier: 238028302

GI number: 238028302

Start: 3132855

End: 3133235

Strand: Direct

Name: 238028302

Synonym: bglu_1g27630

Alternate gene names: NA

Gene position: 3132855-3133235 (Clockwise)

Preceding gene: 238028298

Following gene: 238028303

Centisome position: 80.2

GC content: 70.87

Gene sequence:

>381_bases
ATGAAACCCGACACCGCGCACCGGTTCGACACCGAACTCGCTCCCCGCATCGCCGCGCGCATCGCGACGATGCTCGGTCC
GCGCGTGCGCGTCGTCGCCGTACGCTACGGCGGCCACGGCCACCCGAGCCAGATCCACGTCGTCAGCACCACGCCCGTCC
ACGTCCGCGGCTTCGACCATCCGCTCGACGTCACGCTGACCTGGGACGGCGACGAGATCGAGCGGCTCGTCGCCGACCAG
GACGGCGCCCGCTTCGCGCGCTATCTCAACGCCCTGTCGTGCAAGCTGCCGGGCTGGGAAAGCGCGCGCGGCCTCGACTT
CGGCTCGCGCACGCAGACCACGCCGCACGTGCTGCTCGGGGGACTCGATTTCGAAGCGTGA

Upstream 100 bases:

>100_bases
TGATGCGCGCCACGAGCGCTGCGCGGCGGTCGCATGCTAGGATTTTCGAACACCGCGACGAAGCGACGCAACGCCCACCC
GGGACCGCCACGCCTTCATC

Downstream 100 bases:

>100_bases
GGCGCTCCGGCGGCCGCGAAGGCCGGCCGGGCCGCGTCACGCGCGCATCGGCCGCCGTCGTGATCGGAACGCCGGTGATA
CACTCGGCCGATCCGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKPDTAHRFDTELAPRIAARIATMLGPRVRVVAVRYGGHGHPSQIHVVSTTPVHVRGFDHPLDVTLTWDGDEIERLVADQ
DGARFARYLNALSCKLPGWESARGLDFGSRTQTTPHVLLGGLDFEA

Sequences:

>Translated_126_residues
MKPDTAHRFDTELAPRIAARIATMLGPRVRVVAVRYGGHGHPSQIHVVSTTPVHVRGFDHPLDVTLTWDGDEIERLVADQ
DGARFARYLNALSCKLPGWESARGLDFGSRTQTTPHVLLGGLDFEA
>Mature_126_residues
MKPDTAHRFDTELAPRIAARIATMLGPRVRVVAVRYGGHGHPSQIHVVSTTPVHVRGFDHPLDVTLTWDGDEIERLVADQ
DGARFARYLNALSCKLPGWESARGLDFGSRTQTTPHVLLGGLDFEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13866; Mature: 13866

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDTAHRFDTELAPRIAARIATMLGPRVRVVAVRYGGHGHPSQIHVVSTTPVHVRGFDH
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCEEEECCCC
PLDVTLTWDGDEIERLVADQDGARFARYLNALSCKLPGWESARGLDFGSRTQTTPHVLLG
CEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
GLDFEA
CCCCCC
>Mature Secondary Structure
MKPDTAHRFDTELAPRIAARIATMLGPRVRVVAVRYGGHGHPSQIHVVSTTPVHVRGFDH
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCEEEECCCC
PLDVTLTWDGDEIERLVADQDGARFARYLNALSCKLPGWESARGLDFGSRTQTTPHVLLG
CEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
GLDFEA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA