| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028292
Identifier: 238028292
GI number: 238028292
Start: 3121008
End: 3121289
Strand: Direct
Name: 238028292
Synonym: bglu_1g27500
Alternate gene names: NA
Gene position: 3121008-3121289 (Clockwise)
Preceding gene: 238028291
Following gene: 238028293
Centisome position: 79.89
GC content: 60.99
Gene sequence:
>282_bases ATGACGAAGCTAACCCGACGGACACACTCAGCGGCAGCCAAGGGCAAGCGGACGCTGGCTGAACTGGCGCAGCAGTTCGA TGTGCATCCCAACCAGATCACGGAATGGAAGCGGCAATTGCAGGCGCGCGCGTCGGACGTGTTTGGCGCGGGCGGTGCGC CATCGAGCGGGTCGCCGGTTGAACTGAAATCGCTGCACGCGAAGATCGGGCAACTGACGTTGGAAAATGCTTCTTTAAGC GGCGCGCTCGACAAGGCGGGATTGCCGAGCGCAAAGAAATGA
Upstream 100 bases:
>100_bases TCAACTCGAAAAAAGAGGTGGCCGCGCAAATTCGGACAGCCGGATAAGTGGAGCGGCTGGGGCCTGAGCCAGCGATAACG CTGGCAAAGGAACCTGGAAA
Downstream 100 bases:
>100_bases TTGGCCGTCACCATGCCTTGCCGGTATCGCGGCAAGCCCGGCTTGTGGGAATTGCCAGATCGAGTGTGTACTGCCAGCCC CAGCCGGTGGGCGAAGCGGA
Product: IS3 family transposase orfA
Products: NA
Alternate protein names: Transposase InsN For Insertion Sequence Element IS; Transposase And Inactivated Derivatives; Transposase IS3/IS; IS3 Family Transposase OrfA; Transposase IS3 Family Protein; Transposase IS3/; Transposase IS3 Family
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MTKLTRRTHSAAAKGKRTLAELAQQFDVHPNQITEWKRQLQARASDVFGAGGAPSSGSPVELKSLHAKIGQLTLENASLS GALDKAGLPSAKK
Sequences:
>Translated_93_residues MTKLTRRTHSAAAKGKRTLAELAQQFDVHPNQITEWKRQLQARASDVFGAGGAPSSGSPVELKSLHAKIGQLTLENASLS GALDKAGLPSAKK >Mature_92_residues TKLTRRTHSAAAKGKRTLAELAQQFDVHPNQITEWKRQLQARASDVFGAGGAPSSGSPVELKSLHAKIGQLTLENASLSG ALDKAGLPSAKK
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9833; Mature: 9702
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTRRTHSAAAKGKRTLAELAQQFDVHPNQITEWKRQLQARASDVFGAGGAPSSGSPV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ELKSLHAKIGQLTLENASLSGALDKAGLPSAKK HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKLTRRTHSAAAKGKRTLAELAQQFDVHPNQITEWKRQLQARASDVFGAGGAPSSGSPV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ELKSLHAKIGQLTLENASLSGALDKAGLPSAKK HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA