Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028274

Identifier: 238028274

GI number: 238028274

Start: 3100409

End: 3101509

Strand: Reverse

Name: 238028274

Synonym: bglu_1g27310

Alternate gene names: NA

Gene position: 3101509-3100409 (Counterclockwise)

Preceding gene: 238028275

Following gene: 238028273

Centisome position: 79.39

GC content: 68.12

Gene sequence:

>1101_bases
ATGAAAGGCAAAAAGAAGTGGTGGGACATCCGCGCGCAGGCGAACGCGGATGGCGGTAACGACGTCGAGATCCGGATCTA
TGGCGACATCGGTTTCTGGGGCACGGACGCCGAGCAGTTCGCGGCACGGCTCGACGAGGTCGGCTCGTCGGCGGCATCGA
TCGTCGTTGCGGTCAACTCGATGGGCGGCGACGTGTTTGATGCCTTCACGATCTACAACCTGCTGCGGCGCTACCCCGGC
AAGACGACGGGGCGCGTCGACGGCATCGCCGCGTCGGCCGCATCGCTGCTGTTGATGGGGTGCAGCCAGATCGTGATGCC
ATCCAACGCGATGCTGATGATCCATAACCCGCATACGCTCGCGGCGGGCGACGAGGGCGAATTGCGCCGGTTGGCGGATC
TGCTGGGCAGCACGAGCGCGAACATGCTGACGGCGTACGCCGAGCGCAGCGGACAGACCGAGGACAAGGTGCGCGAGCTG
ATGGACGTCGAGACCTGGCTGACGGCGGCGCAAGCCGTCGAGCTGGGATTCTGCGACGCGATCGAGGAACCGATTCGGAT
TGCGGCGTACGCCGGCGCCCAGCCGCTCGTCGCGCGGTTCGCGGCGATGCCCGAGCAGGTCCGCGCCCTGGTCGATGGCG
AGCCCGAGGCGCCGCCGAATCCGCCTGTCGATCCGCCCGTGGATCCTGTCGATCCGCCGGCCCCGCAAGATCCGCCTGCG
CCGCCGCAGGCGCCGAATGTCGCGGCGCTGGCCTCGCATGTGTACGCGTCGTGCCGCGACGCGCGGATCGAGCACTGCGC
TGAGGGCATCGTGCTCGCGACGGGTCTGCGGGATCGCGCAACGGTGGACGCGGCGATTCGCACCGCGCAAGACATCGCAG
GCATCTGTCTAGCGGCCAACCTGACCGAGCTGACGGCCGGGTTCGTGTCGGACGGTCTGAGCCCGGATCAAGTTCGCGCG
CGGCTCTATGAGCGCGTGACGGCATCCCAGGCGCATATCAATCCCAGGCAGACGCCGAGCAGCCCGAGCGAGCCGGTGAT
CGCCGCAAACGCGCCGCGTGCGGCCTCCATCTACGCAGCCCGCCGTAGCGGCGGAAAGTAA

Upstream 100 bases:

>100_bases
AGAACGCGGCGGACCTTGCACGCGAGCAGCGGCTCGGGCTGCGCTACGACACGCTGGTGCCGGTCGAGGACACGAGCAGC
AATTCGAATGGGGATGACGA

Downstream 100 bases:

>100_bases
CTTTGACGTCCCATGAGGAGGGGCAAACCATGTCGATTGTGAAGGAACAGGGCATTCTCCCGGCCGAATTTCTGGTGTCC
GAAGGCAACGGCCAAATCTC

Product: ATP-dependent Clp protease, proteolytic subunit ClpP

Products: NA

Alternate protein names: ATP-Dependent Clp Protease Proteolytic Subunit; Clp Protease; ClpP Protease; ATP-Dependent Clp Protease Proteolytic Subunit ClpP; Serine Protease; Protease Subunit Of ATP-Dependent Clp Protease; ClpP Protease Family Protein; ATP-Dependent Endopeptidase Clp Proteolytic Subunit ClpP; Clp Protease Domain Protein; Phage Protein; ATP Dependent Clp Protease; ATP-Dependent Protease; Phage-Related Clp Protease; Prophage; ATP-Dependent Clp Protease; Phage Clp-Protease; Protease/Scaffold Protein; Protease Subunit Of ATP-Dependent Clp Proteases; Prophage Clp Protease-Like Protein; Clp Protease Domain-Containing Protein; Clp Protease Family Protein; Clp-Like Protease; Clp Protease Protein; ATP-Dependent Clp Protease Proteolytic Subunit Of Prophage; Clp Protease-Like Protein; Endopeptidase Clp; Phage Portal Protein Lambda Family; ClpP Family Serine Protease; Phage Protease; Peptidase S; ClpP-Type Protease; Phage Related Protease

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKGKKKWWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVGSSAASIVVAVNSMGGDVFDAFTIYNLLRRYPG
KTTGRVDGIAASAASLLLMGCSQIVMPSNAMLMIHNPHTLAAGDEGELRRLADLLGSTSANMLTAYAERSGQTEDKVREL
MDVETWLTAAQAVELGFCDAIEEPIRIAAYAGAQPLVARFAAMPEQVRALVDGEPEAPPNPPVDPPVDPVDPPAPQDPPA
PPQAPNVAALASHVYASCRDARIEHCAEGIVLATGLRDRATVDAAIRTAQDIAGICLAANLTELTAGFVSDGLSPDQVRA
RLYERVTASQAHINPRQTPSSPSEPVIAANAPRAASIYAARRSGGK

Sequences:

>Translated_366_residues
MKGKKKWWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVGSSAASIVVAVNSMGGDVFDAFTIYNLLRRYPG
KTTGRVDGIAASAASLLLMGCSQIVMPSNAMLMIHNPHTLAAGDEGELRRLADLLGSTSANMLTAYAERSGQTEDKVREL
MDVETWLTAAQAVELGFCDAIEEPIRIAAYAGAQPLVARFAAMPEQVRALVDGEPEAPPNPPVDPPVDPVDPPAPQDPPA
PPQAPNVAALASHVYASCRDARIEHCAEGIVLATGLRDRATVDAAIRTAQDIAGICLAANLTELTAGFVSDGLSPDQVRA
RLYERVTASQAHINPRQTPSSPSEPVIAANAPRAASIYAARRSGGK
>Mature_366_residues
MKGKKKWWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVGSSAASIVVAVNSMGGDVFDAFTIYNLLRRYPG
KTTGRVDGIAASAASLLLMGCSQIVMPSNAMLMIHNPHTLAAGDEGELRRLADLLGSTSANMLTAYAERSGQTEDKVREL
MDVETWLTAAQAVELGFCDAIEEPIRIAAYAGAQPLVARFAAMPEQVRALVDGEPEAPPNPPVDPPVDPVDPPAPQDPPA
PPQAPNVAALASHVYASCRDARIEHCAEGIVLATGLRDRATVDAAIRTAQDIAGICLAANLTELTAGFVSDGLSPDQVRA
RLYERVTASQAHINPRQTPSSPSEPVIAANAPRAASIYAARRSGGK

Specific function: Unknown

COG id: COG0740

COG function: function code OU; Protease subunit of ATP-dependent Clp proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38675; Mature: 38675

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKKKWWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVGSSAASIVVAVNS
CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEC
MGGDVFDAFTIYNLLRRYPGKTTGRVDGIAASAASLLLMGCSQIVMPSNAMLMIHNPHTL
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE
AAGDEGELRRLADLLGSTSANMLTAYAERSGQTEDKVRELMDVETWLTAAQAVELGFCDA
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEPIRIAAYAGAQPLVARFAAMPEQVRALVDGEPEAPPNPPVDPPVDPVDPPAPQDPPA
HHHHHHEEHHCCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPQAPNVAALASHVYASCRDARIEHCAEGIVLATGLRDRATVDAAIRTAQDIAGICLAAN
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
LTELTAGFVSDGLSPDQVRARLYERVTASQAHINPRQTPSSPSEPVIAANAPRAASIYAA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHH
RRSGGK
HCCCCC
>Mature Secondary Structure
MKGKKKWWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVGSSAASIVVAVNS
CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEC
MGGDVFDAFTIYNLLRRYPGKTTGRVDGIAASAASLLLMGCSQIVMPSNAMLMIHNPHTL
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE
AAGDEGELRRLADLLGSTSANMLTAYAERSGQTEDKVRELMDVETWLTAAQAVELGFCDA
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEPIRIAAYAGAQPLVARFAAMPEQVRALVDGEPEAPPNPPVDPPVDPVDPPAPQDPPA
HHHHHHEEHHCCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPQAPNVAALASHVYASCRDARIEHCAEGIVLATGLRDRATVDAAIRTAQDIAGICLAAN
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
LTELTAGFVSDGLSPDQVRARLYERVTASQAHINPRQTPSSPSEPVIAANAPRAASIYAA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHH
RRSGGK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA