| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028274
Identifier: 238028274
GI number: 238028274
Start: 3100409
End: 3101509
Strand: Reverse
Name: 238028274
Synonym: bglu_1g27310
Alternate gene names: NA
Gene position: 3101509-3100409 (Counterclockwise)
Preceding gene: 238028275
Following gene: 238028273
Centisome position: 79.39
GC content: 68.12
Gene sequence:
>1101_bases ATGAAAGGCAAAAAGAAGTGGTGGGACATCCGCGCGCAGGCGAACGCGGATGGCGGTAACGACGTCGAGATCCGGATCTA TGGCGACATCGGTTTCTGGGGCACGGACGCCGAGCAGTTCGCGGCACGGCTCGACGAGGTCGGCTCGTCGGCGGCATCGA TCGTCGTTGCGGTCAACTCGATGGGCGGCGACGTGTTTGATGCCTTCACGATCTACAACCTGCTGCGGCGCTACCCCGGC AAGACGACGGGGCGCGTCGACGGCATCGCCGCGTCGGCCGCATCGCTGCTGTTGATGGGGTGCAGCCAGATCGTGATGCC ATCCAACGCGATGCTGATGATCCATAACCCGCATACGCTCGCGGCGGGCGACGAGGGCGAATTGCGCCGGTTGGCGGATC TGCTGGGCAGCACGAGCGCGAACATGCTGACGGCGTACGCCGAGCGCAGCGGACAGACCGAGGACAAGGTGCGCGAGCTG ATGGACGTCGAGACCTGGCTGACGGCGGCGCAAGCCGTCGAGCTGGGATTCTGCGACGCGATCGAGGAACCGATTCGGAT TGCGGCGTACGCCGGCGCCCAGCCGCTCGTCGCGCGGTTCGCGGCGATGCCCGAGCAGGTCCGCGCCCTGGTCGATGGCG AGCCCGAGGCGCCGCCGAATCCGCCTGTCGATCCGCCCGTGGATCCTGTCGATCCGCCGGCCCCGCAAGATCCGCCTGCG CCGCCGCAGGCGCCGAATGTCGCGGCGCTGGCCTCGCATGTGTACGCGTCGTGCCGCGACGCGCGGATCGAGCACTGCGC TGAGGGCATCGTGCTCGCGACGGGTCTGCGGGATCGCGCAACGGTGGACGCGGCGATTCGCACCGCGCAAGACATCGCAG GCATCTGTCTAGCGGCCAACCTGACCGAGCTGACGGCCGGGTTCGTGTCGGACGGTCTGAGCCCGGATCAAGTTCGCGCG CGGCTCTATGAGCGCGTGACGGCATCCCAGGCGCATATCAATCCCAGGCAGACGCCGAGCAGCCCGAGCGAGCCGGTGAT CGCCGCAAACGCGCCGCGTGCGGCCTCCATCTACGCAGCCCGCCGTAGCGGCGGAAAGTAA
Upstream 100 bases:
>100_bases AGAACGCGGCGGACCTTGCACGCGAGCAGCGGCTCGGGCTGCGCTACGACACGCTGGTGCCGGTCGAGGACACGAGCAGC AATTCGAATGGGGATGACGA
Downstream 100 bases:
>100_bases CTTTGACGTCCCATGAGGAGGGGCAAACCATGTCGATTGTGAAGGAACAGGGCATTCTCCCGGCCGAATTTCTGGTGTCC GAAGGCAACGGCCAAATCTC
Product: ATP-dependent Clp protease, proteolytic subunit ClpP
Products: NA
Alternate protein names: ATP-Dependent Clp Protease Proteolytic Subunit; Clp Protease; ClpP Protease; ATP-Dependent Clp Protease Proteolytic Subunit ClpP; Serine Protease; Protease Subunit Of ATP-Dependent Clp Protease; ClpP Protease Family Protein; ATP-Dependent Endopeptidase Clp Proteolytic Subunit ClpP; Clp Protease Domain Protein; Phage Protein; ATP Dependent Clp Protease; ATP-Dependent Protease; Phage-Related Clp Protease; Prophage; ATP-Dependent Clp Protease; Phage Clp-Protease; Protease/Scaffold Protein; Protease Subunit Of ATP-Dependent Clp Proteases; Prophage Clp Protease-Like Protein; Clp Protease Domain-Containing Protein; Clp Protease Family Protein; Clp-Like Protease; Clp Protease Protein; ATP-Dependent Clp Protease Proteolytic Subunit Of Prophage; Clp Protease-Like Protein; Endopeptidase Clp; Phage Portal Protein Lambda Family; ClpP Family Serine Protease; Phage Protease; Peptidase S; ClpP-Type Protease; Phage Related Protease
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKGKKKWWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVGSSAASIVVAVNSMGGDVFDAFTIYNLLRRYPG KTTGRVDGIAASAASLLLMGCSQIVMPSNAMLMIHNPHTLAAGDEGELRRLADLLGSTSANMLTAYAERSGQTEDKVREL MDVETWLTAAQAVELGFCDAIEEPIRIAAYAGAQPLVARFAAMPEQVRALVDGEPEAPPNPPVDPPVDPVDPPAPQDPPA PPQAPNVAALASHVYASCRDARIEHCAEGIVLATGLRDRATVDAAIRTAQDIAGICLAANLTELTAGFVSDGLSPDQVRA RLYERVTASQAHINPRQTPSSPSEPVIAANAPRAASIYAARRSGGK
Sequences:
>Translated_366_residues MKGKKKWWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVGSSAASIVVAVNSMGGDVFDAFTIYNLLRRYPG KTTGRVDGIAASAASLLLMGCSQIVMPSNAMLMIHNPHTLAAGDEGELRRLADLLGSTSANMLTAYAERSGQTEDKVREL MDVETWLTAAQAVELGFCDAIEEPIRIAAYAGAQPLVARFAAMPEQVRALVDGEPEAPPNPPVDPPVDPVDPPAPQDPPA PPQAPNVAALASHVYASCRDARIEHCAEGIVLATGLRDRATVDAAIRTAQDIAGICLAANLTELTAGFVSDGLSPDQVRA RLYERVTASQAHINPRQTPSSPSEPVIAANAPRAASIYAARRSGGK >Mature_366_residues MKGKKKWWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVGSSAASIVVAVNSMGGDVFDAFTIYNLLRRYPG KTTGRVDGIAASAASLLLMGCSQIVMPSNAMLMIHNPHTLAAGDEGELRRLADLLGSTSANMLTAYAERSGQTEDKVREL MDVETWLTAAQAVELGFCDAIEEPIRIAAYAGAQPLVARFAAMPEQVRALVDGEPEAPPNPPVDPPVDPVDPPAPQDPPA PPQAPNVAALASHVYASCRDARIEHCAEGIVLATGLRDRATVDAAIRTAQDIAGICLAANLTELTAGFVSDGLSPDQVRA RLYERVTASQAHINPRQTPSSPSEPVIAANAPRAASIYAARRSGGK
Specific function: Unknown
COG id: COG0740
COG function: function code OU; Protease subunit of ATP-dependent Clp proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38675; Mature: 38675
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKKKWWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVGSSAASIVVAVNS CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEC MGGDVFDAFTIYNLLRRYPGKTTGRVDGIAASAASLLLMGCSQIVMPSNAMLMIHNPHTL CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE AAGDEGELRRLADLLGSTSANMLTAYAERSGQTEDKVRELMDVETWLTAAQAVELGFCDA CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IEEPIRIAAYAGAQPLVARFAAMPEQVRALVDGEPEAPPNPPVDPPVDPVDPPAPQDPPA HHHHHHEEHHCCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPQAPNVAALASHVYASCRDARIEHCAEGIVLATGLRDRATVDAAIRTAQDIAGICLAAN CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC LTELTAGFVSDGLSPDQVRARLYERVTASQAHINPRQTPSSPSEPVIAANAPRAASIYAA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHH RRSGGK HCCCCC >Mature Secondary Structure MKGKKKWWDIRAQANADGGNDVEIRIYGDIGFWGTDAEQFAARLDEVGSSAASIVVAVNS CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEC MGGDVFDAFTIYNLLRRYPGKTTGRVDGIAASAASLLLMGCSQIVMPSNAMLMIHNPHTL CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE AAGDEGELRRLADLLGSTSANMLTAYAERSGQTEDKVRELMDVETWLTAAQAVELGFCDA CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IEEPIRIAAYAGAQPLVARFAAMPEQVRALVDGEPEAPPNPPVDPPVDPVDPPAPQDPPA HHHHHHEEHHCCCHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPQAPNVAALASHVYASCRDARIEHCAEGIVLATGLRDRATVDAAIRTAQDIAGICLAAN CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC LTELTAGFVSDGLSPDQVRARLYERVTASQAHINPRQTPSSPSEPVIAANAPRAASIYAA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHH RRSGGK HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA