| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028271
Identifier: 238028271
GI number: 238028271
Start: 3098137
End: 3098667
Strand: Reverse
Name: 238028271
Synonym: bglu_1g27250
Alternate gene names: NA
Gene position: 3098667-3098137 (Counterclockwise)
Preceding gene: 238028272
Following gene: 238028270
Centisome position: 79.32
GC content: 65.91
Gene sequence:
>531_bases ATGGACCTGCTGAAAGTCGAAATCGACGTGAAGGGGGCGCTCGAAGCGCTCGCCGCTCTGCCGCCTGCCGCGATGCAGTC GGCATGGCGGCGAACGCTCCGGAAGACAGCGGCCTGGATCAAGAGCCAGACGGCGAAAGATGTCGGCCGCGCAACGGGTA TACAGCAGAAGGTGATCCGACAGCGGACGTATTTCTACATGCGGTCTGCCGATAGCGGGAAGGTGTGGCTCGGCCTCAAT CCGATCGGGGCACACCGGCTCGGCGCCGTGCGTCGGACGCGCAAGGGCATTCGCGCCGGCAAGACGCTGTTCGAGGGCGC CTGGCGCATGACGGGGAAGGCGCCGGACGGTCCCGTGTTCCGCCGAACCGGCAAGGGGCGCACGCCGATCGAGGTGGTGA GGTTCGATTGGGCGCATGAGGGAGATCCGGCCTTTCGTCGGGCTGCCCGAGCGTGCGAGCAAAGACTGCTGGCGGTACTG CGGCAGGAGGTCAACTACGAAATCCAGAAGGCGGTGGGCCGTGCTCGATAA
Upstream 100 bases:
>100_bases CAAGGTCGGTAGCATCGTCGTGGCCGGCGGGAACCGCTACCGCGTTCATGAACTGCAGCCGGACGGCACGGGGTGGACGG TCTTGATCTTGGGGTAACGC
Downstream 100 bases:
>100_bases CCTCAAGCAACTGCACGACGCGATAGAAACCGGGCTGCGTGCCCGGCTCGTGGGGCTCGACCGGGTGCTTGCTTATCCGG GGATCGGGAAGTCGATCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDLLKVEIDVKGALEALAALPPAAMQSAWRRTLRKTAAWIKSQTAKDVGRATGIQQKVIRQRTYFYMRSADSGKVWLGLN PIGAHRLGAVRRTRKGIRAGKTLFEGAWRMTGKAPDGPVFRRTGKGRTPIEVVRFDWAHEGDPAFRRAARACEQRLLAVL RQEVNYEIQKAVGRAR
Sequences:
>Translated_176_residues MDLLKVEIDVKGALEALAALPPAAMQSAWRRTLRKTAAWIKSQTAKDVGRATGIQQKVIRQRTYFYMRSADSGKVWLGLN PIGAHRLGAVRRTRKGIRAGKTLFEGAWRMTGKAPDGPVFRRTGKGRTPIEVVRFDWAHEGDPAFRRAARACEQRLLAVL RQEVNYEIQKAVGRAR >Mature_176_residues MDLLKVEIDVKGALEALAALPPAAMQSAWRRTLRKTAAWIKSQTAKDVGRATGIQQKVIRQRTYFYMRSADSGKVWLGLN PIGAHRLGAVRRTRKGIRAGKTLFEGAWRMTGKAPDGPVFRRTGKGRTPIEVVRFDWAHEGDPAFRRAARACEQRLLAVL RQEVNYEIQKAVGRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19750; Mature: 19750
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLKVEIDVKGALEALAALPPAAMQSAWRRTLRKTAAWIKSQTAKDVGRATGIQQKVIR CCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QRTYFYMRSADSGKVWLGLNPIGAHRLGAVRRTRKGIRAGKTLFEGAWRMTGKAPDGPVF HHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE RRTGKGRTPIEVVRFDWAHEGDPAFRRAARACEQRLLAVLRQEVNYEIQKAVGRAR ECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCC >Mature Secondary Structure MDLLKVEIDVKGALEALAALPPAAMQSAWRRTLRKTAAWIKSQTAKDVGRATGIQQKVIR CCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QRTYFYMRSADSGKVWLGLNPIGAHRLGAVRRTRKGIRAGKTLFEGAWRMTGKAPDGPVF HHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE RRTGKGRTPIEVVRFDWAHEGDPAFRRAARACEQRLLAVLRQEVNYEIQKAVGRAR ECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA