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The map label for this gene is ubiC [H]

Identifier: 238028228

GI number: 238028228

Start: 3051666

End: 3052304

Strand: Reverse

Name: ubiC [H]

Synonym: bglu_1g26810

Alternate gene names: 238028228

Gene position: 3052304-3051666 (Counterclockwise)

Preceding gene: 238028229

Following gene: 238028227

Centisome position: 78.13

GC content: 76.68

Gene sequence:

>639_bases
GTGACGCGCGTGCGATTCAGCGCGGCCGACGCGAGCTGGTGCGCCACCCCGCGCCCCGGCCTCGCGCCTGCGCAGAAGCA
CTGGCTCACGCGCGGCGGCTCGCTGACCGCGCACCTTGCCACGCTCGGCAAGGTGAGCGTGGCCGTCACGCGCGAGACGG
TGGCCCTGCCATGGGCCGACGAGCCGGCCGCGCTGGGCGGCTCGCCGCGCACCGCGTGCTGGGTGCGCGAGGTGGTGCTC
AGCGTCGACGGCGAGCCCTGCATGGCCGCGCACAGCCTGACGCCGCTCGGCGCCAGCCGCGGCGTCTGGCAGGCGATCCG
GCGGCTGCGCACGCGGCCGCTCGCCGAACTGCTCTACAGCGACATGCAGGTCGGGCGCTCGGCGCTGGTCAGCCGGCGCG
TGATCGCCGGGCATCCGCTGCATGCCCTCGCGGCCCGCGCGCTGCCGGCCGACGCGCCGCTGCCGCATGTGTTCCTCGCG
CGGCGTTCGGTGTTCGAGCGGCACCAGGCGCCGCTGATGGTCACCGAATGCATGCTGCCCGGCCTGTGGCGACGCGTGAT
GGGCCATCCCGGCAGCGGCGCCAGTGAAGCCGGCGGCTCGCCCGAGCGGCGCTCGCATCGCAGGGGCGCCCGGCCGTGA

Upstream 100 bases:

>100_bases
ACCTGCTGCTCGATCAGGCGCTGCTCGCCGAGGGCGGCGCGCTCGAGGACCCGGCTGCGTTCGTCAAGCGCACCAACGCC
CTGCTGCTGTCGCGCGGCGC

Downstream 100 bases:

>100_bases
CGCTCAAGCGCAGTTTCGCGCCGGTGGTCGATGCCCAGACGCGCGTGTTGATCCTCGGCAGCCTGCCGGGCGAGGTCTCG
CTGGCCCAAAGCCAGTATTA

Product: Chorismate lyase family protein

Products: NA

Alternate protein names: CL; CPL [H]

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTRVRFSAADASWCATPRPGLAPAQKHWLTRGGSLTAHLATLGKVSVAVTRETVALPWADEPAALGGSPRTACWVREVVL
SVDGEPCMAAHSLTPLGASRGVWQAIRRLRTRPLAELLYSDMQVGRSALVSRRVIAGHPLHALAARALPADAPLPHVFLA
RRSVFERHQAPLMVTECMLPGLWRRVMGHPGSGASEAGGSPERRSHRRGARP

Sequences:

>Translated_212_residues
MTRVRFSAADASWCATPRPGLAPAQKHWLTRGGSLTAHLATLGKVSVAVTRETVALPWADEPAALGGSPRTACWVREVVL
SVDGEPCMAAHSLTPLGASRGVWQAIRRLRTRPLAELLYSDMQVGRSALVSRRVIAGHPLHALAARALPADAPLPHVFLA
RRSVFERHQAPLMVTECMLPGLWRRVMGHPGSGASEAGGSPERRSHRRGARP
>Mature_211_residues
TRVRFSAADASWCATPRPGLAPAQKHWLTRGGSLTAHLATLGKVSVAVTRETVALPWADEPAALGGSPRTACWVREVVLS
VDGEPCMAAHSLTPLGASRGVWQAIRRLRTRPLAELLYSDMQVGRSALVSRRVIAGHPLHALAARALPADAPLPHVFLAR
RSVFERHQAPLMVTECMLPGLWRRVMGHPGSGASEAGGSPERRSHRRGARP

Specific function: Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway [H]

COG id: COG3161

COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007440 [H]

Pfam domain/function: PF04345 Chor_lyase [H]

EC number: =4.1.3.40 [H]

Molecular weight: Translated: 22811; Mature: 22679

Theoretical pI: Translated: 11.99; Mature: 11.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVRFSAADASWCATPRPGLAPAQKHWLTRGGSLTAHLATLGKVSVAVTRETVALPWAD
CCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEEECCEEECCCCC
EPAALGGSPRTACWVREVVLSVDGEPCMAAHSLTPLGASRGVWQAIRRLRTRPLAELLYS
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHH
DMQVGRSALVSRRVIAGHPLHALAARALPADAPLPHVFLARRSVFERHQAPLMVTECMLP
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
GLWRRVMGHPGSGASEAGGSPERRSHRRGARP
HHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure 
TRVRFSAADASWCATPRPGLAPAQKHWLTRGGSLTAHLATLGKVSVAVTRETVALPWAD
CCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHEEEECCEEECCCCC
EPAALGGSPRTACWVREVVLSVDGEPCMAAHSLTPLGASRGVWQAIRRLRTRPLAELLYS
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHH
DMQVGRSALVSRRVIAGHPLHALAARALPADAPLPHVFLARRSVFERHQAPLMVTECMLP
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
GLWRRVMGHPGSGASEAGGSPERRSHRRGARP
HHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA