| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is purT [H]
Identifier: 238028208
GI number: 238028208
Start: 3027267
End: 3028481
Strand: Reverse
Name: purT [H]
Synonym: bglu_1g26600
Alternate gene names: 238028208
Gene position: 3028481-3027267 (Counterclockwise)
Preceding gene: 238028211
Following gene: 238028207
Centisome position: 77.52
GC content: 71.52
Gene sequence:
>1215_bases ATGCAGATCGGTCAGCGGCTCGGCACGCCGCTCTCGCCTTCCGCCACGCGCGTCATGCTGCTGGGCGCGGGCGAACTCGG CAAGGAAGTCATCATCGCGTTGCAGCGGCTCGGCGTGGAGGTGATCGCCGTCGATCGCTACGCGAACGCGCCCGGCCATC AGGTCGCCCACCGCGCGCACGTGATCGACATGACCGATGCCGCCGCGCTGCGCGCGCTCGTCGACGCCGAACAGCCGCAC CTGATCGTGCCCGAGATCGAGGCGATCGCCACCGACGCGCTGGCCGCGATCGAGGCGGCCGGTGTCGCCGAGGTGATCCC GACCGCGCGCGCGACGCAGCTGACGATGAATCGCGAGGGCATCCGCCGCCTCGCCGCCGAGGAGCTCGGCCTGCCGACCT CGCGCTACGCGTTCGCGCAGTCGTTCGACGCATTCCGCGCGGCGGTGGCCGCGATCGGCTGTCCGTGCGTGGTGAAGCCG GTGATGTCGTCGTCGGGCAAGGGCCAGTCGGTCGTGAAGGGCGACGCCGATCTCGAGCCGGCCTGGCAGCACGCGATGGC GGGCGGACGCGTGAACCACGGCCGCGTGATCGTGGAGGGTTTCGTCGATTTCGACTACGAGATCACGCAGCTGACCGTGC GTGCGATCGATCCGGCCAGCGGCGAGACCCGCACCTATTTCTGCGATCCGGTCGGCCATCTGCAGGTGGCGGGCGACTAC GTCGAATCGTGGCAGCCCCAGCCGATGAGCGAGGTGGCGCGGGAACGTTCGCGCCAGATCGCGCACCAAGTGACGACGGC GCTCGGCGGGCGCGGCCTGTTCGGTGTCGAGCTGTTCGTGCGCGGCGACCAGGTCTGGTTTTCCGAAGTCAGCCCGCGCC CGCACGACACGGGACTCGTCACGCTCGCCTCGCAGCGGCAGTCGGAGTTCGAGCTGCACGCGCGCGCCATCCTCGGCCTA CCGGTCGATCCGACCCTGGGCTCGCCGGCGGCCTCGGCCGTGATCTACGGCGGTCTCGACGAGGCCGGCATCGCCTTCGA GGGCGTGGCCGAGGCGCTTGCCGTGCCGGGCGCGGAGCTGCGCCTGTTCGGCAAGCCGGAGAGTTTCGCGAAGCGGCGCA TGGGCGTGGCGGTGGCGACCGGCGCCGATATCGACGAGGCGCGCGAGCGCGCGAAACGGGCGGCGGCGGCGGTGCGGCCG GTATCGGCACGCTAG
Upstream 100 bases:
>100_bases CGCGAGCCTGCTCCGCCGGCGGGGCCGGGCGTGGGCGCGTGTTAACATCGCGGCTCGATTGTCATCCTCTTTTCACCCCA TTTTTTCAGCGGAAAATCTC
Downstream 100 bases:
>100_bases CGGCGACGCGTCCGCGGCAGGCGCCACGACGTGCCGCGCGGGCAACATGAATCACAGGCCGACGCGGCGCGCGCCGCGCG GCCGGGGAGTGGCGAAATGA
Product: phosphoribosylglycinamide formyltransferase 2
Products: 5'-Phosphoribosyl-N-Formylglycinamide; Pyrophosphate; acetylphosphate; ADP [C]
Alternate protein names: GART 2; 5'-phosphoribosylglycinamide transformylase 2; Formate-dependent GAR transformylase; GAR transformylase 2 [H]
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MQIGQRLGTPLSPSATRVMLLGAGELGKEVIIALQRLGVEVIAVDRYANAPGHQVAHRAHVIDMTDAAALRALVDAEQPH LIVPEIEAIATDALAAIEAAGVAEVIPTARATQLTMNREGIRRLAAEELGLPTSRYAFAQSFDAFRAAVAAIGCPCVVKP VMSSSGKGQSVVKGDADLEPAWQHAMAGGRVNHGRVIVEGFVDFDYEITQLTVRAIDPASGETRTYFCDPVGHLQVAGDY VESWQPQPMSEVARERSRQIAHQVTTALGGRGLFGVELFVRGDQVWFSEVSPRPHDTGLVTLASQRQSEFELHARAILGL PVDPTLGSPAASAVIYGGLDEAGIAFEGVAEALAVPGAELRLFGKPESFAKRRMGVAVATGADIDEARERAKRAAAAVRP VSAR
Sequences:
>Translated_404_residues MQIGQRLGTPLSPSATRVMLLGAGELGKEVIIALQRLGVEVIAVDRYANAPGHQVAHRAHVIDMTDAAALRALVDAEQPH LIVPEIEAIATDALAAIEAAGVAEVIPTARATQLTMNREGIRRLAAEELGLPTSRYAFAQSFDAFRAAVAAIGCPCVVKP VMSSSGKGQSVVKGDADLEPAWQHAMAGGRVNHGRVIVEGFVDFDYEITQLTVRAIDPASGETRTYFCDPVGHLQVAGDY VESWQPQPMSEVARERSRQIAHQVTTALGGRGLFGVELFVRGDQVWFSEVSPRPHDTGLVTLASQRQSEFELHARAILGL PVDPTLGSPAASAVIYGGLDEAGIAFEGVAEALAVPGAELRLFGKPESFAKRRMGVAVATGADIDEARERAKRAAAAVRP VSAR >Mature_404_residues MQIGQRLGTPLSPSATRVMLLGAGELGKEVIIALQRLGVEVIAVDRYANAPGHQVAHRAHVIDMTDAAALRALVDAEQPH LIVPEIEAIATDALAAIEAAGVAEVIPTARATQLTMNREGIRRLAAEELGLPTSRYAFAQSFDAFRAAVAAIGCPCVVKP VMSSSGKGQSVVKGDADLEPAWQHAMAGGRVNHGRVIVEGFVDFDYEITQLTVRAIDPASGETRTYFCDPVGHLQVAGDY VESWQPQPMSEVARERSRQIAHQVTTALGGRGLFGVELFVRGDQVWFSEVSPRPHDTGLVTLASQRQSEFELHARAILGL PVDPTLGSPAASAVIYGGLDEAGIAFEGVAEALAVPGAELRLFGKPESFAKRRMGVAVATGADIDEARERAKRAAAAVRP VSAR
Specific function: Catalyzes two reactions:the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR; the second, a side reaction, is the production of acetyl phosphate and ADP from acetate and ATP [H]
COG id: COG0027
COG function: function code F; Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1788155, Length=396, Percent_Identity=62.6262626262626, Blast_Score=452, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6324702, Length=385, Percent_Identity=22.5974025974026, Blast_Score=90, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR005862 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: 2.1.2.- [C]
Molecular weight: Translated: 42840; Mature: 42840
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIGQRLGTPLSPSATRVMLLGAGELGKEVIIALQRLGVEVIAVDRYANAPGHQVAHRAH CCCCHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHEE VIDMTDAAALRALVDAEQPHLIVPEIEAIATDALAAIEAAGVAEVIPTARATQLTMNREG EEECHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCHHHHHCCCCHHEEEECHHH IRRLAAEELGLPTSRYAFAQSFDAFRAAVAAIGCPCVVKPVMSSSGKGQSVVKGDADLEP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCCH AWQHAMAGGRVNHGRVIVEGFVDFDYEITQLTVRAIDPASGETRTYFCDPVGHLQVAGDY HHHHHHCCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEECCHH VESWQPQPMSEVARERSRQIAHQVTTALGGRGLFGVELFVRGDQVWFSEVSPRPHDTGLV HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCCCCCCEE TLASQRQSEFELHARAILGLPVDPTLGSPAASAVIYGGLDEAGIAFEGVAEALAVPGAEL EEECCCCHHHHHEEHEEECCCCCCCCCCCHHCEEEECCCCCCCCHHHHHHHHHHCCCCEE RLFGKPESFAKRRMGVAVATGADIDEARERAKRAAAAVRPVSAR EEECCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQIGQRLGTPLSPSATRVMLLGAGELGKEVIIALQRLGVEVIAVDRYANAPGHQVAHRAH CCCCHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHEE VIDMTDAAALRALVDAEQPHLIVPEIEAIATDALAAIEAAGVAEVIPTARATQLTMNREG EEECHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCHHHHHCCCCHHEEEECHHH IRRLAAEELGLPTSRYAFAQSFDAFRAAVAAIGCPCVVKPVMSSSGKGQSVVKGDADLEP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCCH AWQHAMAGGRVNHGRVIVEGFVDFDYEITQLTVRAIDPASGETRTYFCDPVGHLQVAGDY HHHHHHCCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEECCHH VESWQPQPMSEVARERSRQIAHQVTTALGGRGLFGVELFVRGDQVWFSEVSPRPHDTGLV HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCCCCCCEE TLASQRQSEFELHARAILGLPVDPTLGSPAASAVIYGGLDEAGIAFEGVAEALAVPGAEL EEECCCCHHHHHEEHEEECCCCCCCCCCCHHCEEEECCCCCCCCHHHHHHHHHHCCCCEE RLFGKPESFAKRRMGVAVATGADIDEARERAKRAAAAVRPVSAR EEECCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Formate; 5'-Phospho-Ribosylglycinamide; acetate; ATP [C]
Specific reaction: Formate + ATP + 5'-Phospho-Ribosylglycinamide = 5'-Phosphoribosyl-N-Formylglycinamide + ADP + Pyrophosphate. acetate + ATP = acetylphosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA