Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is gluQ [H]

Identifier: 238028204

GI number: 238028204

Start: 3023779

End: 3024693

Strand: Direct

Name: gluQ [H]

Synonym: bglu_1g26560

Alternate gene names: 238028204

Gene position: 3023779-3024693 (Clockwise)

Preceding gene: 238028203

Following gene: 238028209

Centisome position: 77.4

GC content: 74.75

Gene sequence:

>915_bases
TTGAAACCGGCCGGCGCACCGGGCCGCTATCGCGGCCGCTTCGCGCCGTCGCCGACCGGCCCGCTGCATTTCGGCTCGCT
GGTCGGCGCGCTCGCCAGCTGGCTCGACGCCCGCGCACATGGCGGCGCGTGGCTGGTGCGGATCGAGGACGTCGACGGCC
CGCGCACGGTACCCGGTGCGGCGGACGCGATTGTCTCGACGCTTGCCGCGTTCGGGCTCGTGGCCGACGAGCCGCCCGTC
TGGCAGAGCCGCCGCGGCGCCGCCTACACGGCCGCGCTCGACGCGCTGACGCAGGCCGGTCTCGTCTACCCGTGCGGCTG
CACGCGCAAGGAAATCGCCGACTCGCTGCGCGCCGCGCACGAGCGGCACACCACGCTCGCCTATCCCGGCACCTGCCGCA
GCGGCCTGCACGGCAAGCCGGCGCGCGCATGGCGGCTGCGCGTGCCGGACGGCGCGGCGGCACGCATCGCGTTCGACGAC
CGCTGGCAGGGCCGGCAAACGCAGGATCTGGCCACCGAGGTCGGCGATTTCGTGCTCAGGCGCGCCGACGGCCAGTGGGC
CTACCAGCTCGCCGTGGTGGTCGACGATCGCGACGCGGGCATCACGCACGTGGTGCGCGGCGCGGACCTGCTCGATTCGA
CCGCGCGGCAGATCCATCTGCAACGCTGCCTGGGCGCGCCGACGCCCGCCTATCTGCATGTGCCGGTGGTGGTGGATGCC
AACGGCGAGAAGCTCAGCAAGCAGACCGGCGCGACGGCGCTCGACACGCGCACGCCGCTCGTCGCGCTCGCCGCGGCGGC
CGATCATCTCGGGCTCCCGCTCGCGCCGTCGGCACGCGCCTCGCTCGAGGCATTCTTTCCGGCGGCGATCGCCGCCTGGG
CCGCGCGTTTCGGAGCGCACGCGCGCTCGGGCTGA

Upstream 100 bases:

>100_bases
AGGACCAGCAGTCGCCGCTGTACGTGCCGGGCCGTTCCTGCCCGGCCTGCCATGCGGGCACCGCCGCGCACGCCGGCGCC
GAACCGCTCGCCCGCTCCGC

Downstream 100 bases:

>100_bases
GCGCCGCGCTCGCCGTGGCCGGTCCGCCGGGCATGGGACTGCCGCTGTCAGGCGACAGCGCCGGGCCGGCCGCTCGTCAC
CCGCCAAACAAAAACGGGCG

Product: glutamyl-Q tRNA(Asp) synthetase

Products: NA

Alternate protein names: Glu-Q-RSs [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKPAGAPGRYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDVDGPRTVPGAADAIVSTLAAFGLVADEPPV
WQSRRGAAYTAALDALTQAGLVYPCGCTRKEIADSLRAAHERHTTLAYPGTCRSGLHGKPARAWRLRVPDGAAARIAFDD
RWQGRQTQDLATEVGDFVLRRADGQWAYQLAVVVDDRDAGITHVVRGADLLDSTARQIHLQRCLGAPTPAYLHVPVVVDA
NGEKLSKQTGATALDTRTPLVALAAAADHLGLPLAPSARASLEAFFPAAIAAWAARFGAHARSG

Sequences:

>Translated_304_residues
MKPAGAPGRYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDVDGPRTVPGAADAIVSTLAAFGLVADEPPV
WQSRRGAAYTAALDALTQAGLVYPCGCTRKEIADSLRAAHERHTTLAYPGTCRSGLHGKPARAWRLRVPDGAAARIAFDD
RWQGRQTQDLATEVGDFVLRRADGQWAYQLAVVVDDRDAGITHVVRGADLLDSTARQIHLQRCLGAPTPAYLHVPVVVDA
NGEKLSKQTGATALDTRTPLVALAAAADHLGLPLAPSARASLEAFFPAAIAAWAARFGAHARSG
>Mature_304_residues
MKPAGAPGRYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDVDGPRTVPGAADAIVSTLAAFGLVADEPPV
WQSRRGAAYTAALDALTQAGLVYPCGCTRKEIADSLRAAHERHTTLAYPGTCRSGLHGKPARAWRLRVPDGAAARIAFDD
RWQGRQTQDLATEVGDFVLRRADGQWAYQLAVVVDDRDAGITHVVRGADLLDSTARQIHLQRCLGAPTPAYLHVPVVVDA
NGEKLSKQTGATALDTRTPLVALAAAADHLGLPLAPSARASLEAFFPAAIAAWAARFGAHARSG

Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi

COG id: COG0008

COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]

Homologues:

Organism=Homo sapiens, GI134288884, Length=261, Percent_Identity=36.7816091954023, Blast_Score=155, Evalue=4e-38,
Organism=Escherichia coli, GI226510925, Length=293, Percent_Identity=43.6860068259386, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1788743, Length=247, Percent_Identity=37.6518218623482, Blast_Score=174, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI71993394, Length=254, Percent_Identity=33.8582677165354, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6324540, Length=256, Percent_Identity=33.59375, Blast_Score=139, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24665321, Length=262, Percent_Identity=36.2595419847328, Blast_Score=142, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022380
- InterPro:   IPR000924
- InterPro:   IPR020058
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00749 tRNA-synt_1c [H]

EC number: NA

Molecular weight: Translated: 32048; Mature: 32048

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAGAPGRYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDVDGPRTVPGA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCH
ADAIVSTLAAFGLVADEPPVWQSRRGAAYTAALDALTQAGLVYPCGCTRKEIADSLRAAH
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHH
ERHTTLAYPGTCRSGLHGKPARAWRLRVPDGAAARIAFDDRWQGRQTQDLATEVGDFVLR
HHCCEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
RADGQWAYQLAVVVDDRDAGITHVVRGADLLDSTARQIHLQRCLGAPTPAYLHVPVVVDA
CCCCCEEEEEEEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
NGEKLSKQTGATALDTRTPLVALAAAADHLGLPLAPSARASLEAFFPAAIAAWAARFGAH
CCCHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
ARSG
CCCC
>Mature Secondary Structure
MKPAGAPGRYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDVDGPRTVPGA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCH
ADAIVSTLAAFGLVADEPPVWQSRRGAAYTAALDALTQAGLVYPCGCTRKEIADSLRAAH
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHH
ERHTTLAYPGTCRSGLHGKPARAWRLRVPDGAAARIAFDDRWQGRQTQDLATEVGDFVLR
HHCCEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
RADGQWAYQLAVVVDDRDAGITHVVRGADLLDSTARQIHLQRCLGAPTPAYLHVPVVVDA
CCCCCEEEEEEEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
NGEKLSKQTGATALDTRTPLVALAAAADHLGLPLAPSARASLEAFFPAAIAAWAARFGAH
CCCHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
ARSG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA