Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is gluQ [H]
Identifier: 238028204
GI number: 238028204
Start: 3023779
End: 3024693
Strand: Direct
Name: gluQ [H]
Synonym: bglu_1g26560
Alternate gene names: 238028204
Gene position: 3023779-3024693 (Clockwise)
Preceding gene: 238028203
Following gene: 238028209
Centisome position: 77.4
GC content: 74.75
Gene sequence:
>915_bases TTGAAACCGGCCGGCGCACCGGGCCGCTATCGCGGCCGCTTCGCGCCGTCGCCGACCGGCCCGCTGCATTTCGGCTCGCT GGTCGGCGCGCTCGCCAGCTGGCTCGACGCCCGCGCACATGGCGGCGCGTGGCTGGTGCGGATCGAGGACGTCGACGGCC CGCGCACGGTACCCGGTGCGGCGGACGCGATTGTCTCGACGCTTGCCGCGTTCGGGCTCGTGGCCGACGAGCCGCCCGTC TGGCAGAGCCGCCGCGGCGCCGCCTACACGGCCGCGCTCGACGCGCTGACGCAGGCCGGTCTCGTCTACCCGTGCGGCTG CACGCGCAAGGAAATCGCCGACTCGCTGCGCGCCGCGCACGAGCGGCACACCACGCTCGCCTATCCCGGCACCTGCCGCA GCGGCCTGCACGGCAAGCCGGCGCGCGCATGGCGGCTGCGCGTGCCGGACGGCGCGGCGGCACGCATCGCGTTCGACGAC CGCTGGCAGGGCCGGCAAACGCAGGATCTGGCCACCGAGGTCGGCGATTTCGTGCTCAGGCGCGCCGACGGCCAGTGGGC CTACCAGCTCGCCGTGGTGGTCGACGATCGCGACGCGGGCATCACGCACGTGGTGCGCGGCGCGGACCTGCTCGATTCGA CCGCGCGGCAGATCCATCTGCAACGCTGCCTGGGCGCGCCGACGCCCGCCTATCTGCATGTGCCGGTGGTGGTGGATGCC AACGGCGAGAAGCTCAGCAAGCAGACCGGCGCGACGGCGCTCGACACGCGCACGCCGCTCGTCGCGCTCGCCGCGGCGGC CGATCATCTCGGGCTCCCGCTCGCGCCGTCGGCACGCGCCTCGCTCGAGGCATTCTTTCCGGCGGCGATCGCCGCCTGGG CCGCGCGTTTCGGAGCGCACGCGCGCTCGGGCTGA
Upstream 100 bases:
>100_bases AGGACCAGCAGTCGCCGCTGTACGTGCCGGGCCGTTCCTGCCCGGCCTGCCATGCGGGCACCGCCGCGCACGCCGGCGCC GAACCGCTCGCCCGCTCCGC
Downstream 100 bases:
>100_bases GCGCCGCGCTCGCCGTGGCCGGTCCGCCGGGCATGGGACTGCCGCTGTCAGGCGACAGCGCCGGGCCGGCCGCTCGTCAC CCGCCAAACAAAAACGGGCG
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKPAGAPGRYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDVDGPRTVPGAADAIVSTLAAFGLVADEPPV WQSRRGAAYTAALDALTQAGLVYPCGCTRKEIADSLRAAHERHTTLAYPGTCRSGLHGKPARAWRLRVPDGAAARIAFDD RWQGRQTQDLATEVGDFVLRRADGQWAYQLAVVVDDRDAGITHVVRGADLLDSTARQIHLQRCLGAPTPAYLHVPVVVDA NGEKLSKQTGATALDTRTPLVALAAAADHLGLPLAPSARASLEAFFPAAIAAWAARFGAHARSG
Sequences:
>Translated_304_residues MKPAGAPGRYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDVDGPRTVPGAADAIVSTLAAFGLVADEPPV WQSRRGAAYTAALDALTQAGLVYPCGCTRKEIADSLRAAHERHTTLAYPGTCRSGLHGKPARAWRLRVPDGAAARIAFDD RWQGRQTQDLATEVGDFVLRRADGQWAYQLAVVVDDRDAGITHVVRGADLLDSTARQIHLQRCLGAPTPAYLHVPVVVDA NGEKLSKQTGATALDTRTPLVALAAAADHLGLPLAPSARASLEAFFPAAIAAWAARFGAHARSG >Mature_304_residues MKPAGAPGRYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDVDGPRTVPGAADAIVSTLAAFGLVADEPPV WQSRRGAAYTAALDALTQAGLVYPCGCTRKEIADSLRAAHERHTTLAYPGTCRSGLHGKPARAWRLRVPDGAAARIAFDD RWQGRQTQDLATEVGDFVLRRADGQWAYQLAVVVDDRDAGITHVVRGADLLDSTARQIHLQRCLGAPTPAYLHVPVVVDA NGEKLSKQTGATALDTRTPLVALAAAADHLGLPLAPSARASLEAFFPAAIAAWAARFGAHARSG
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=261, Percent_Identity=36.7816091954023, Blast_Score=155, Evalue=4e-38, Organism=Escherichia coli, GI226510925, Length=293, Percent_Identity=43.6860068259386, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1788743, Length=247, Percent_Identity=37.6518218623482, Blast_Score=174, Evalue=6e-45, Organism=Caenorhabditis elegans, GI71993394, Length=254, Percent_Identity=33.8582677165354, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6324540, Length=256, Percent_Identity=33.59375, Blast_Score=139, Evalue=4e-34, Organism=Drosophila melanogaster, GI24665321, Length=262, Percent_Identity=36.2595419847328, Blast_Score=142, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 32048; Mature: 32048
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPAGAPGRYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDVDGPRTVPGA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCH ADAIVSTLAAFGLVADEPPVWQSRRGAAYTAALDALTQAGLVYPCGCTRKEIADSLRAAH HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHH ERHTTLAYPGTCRSGLHGKPARAWRLRVPDGAAARIAFDDRWQGRQTQDLATEVGDFVLR HHCCEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH RADGQWAYQLAVVVDDRDAGITHVVRGADLLDSTARQIHLQRCLGAPTPAYLHVPVVVDA CCCCCEEEEEEEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC NGEKLSKQTGATALDTRTPLVALAAAADHLGLPLAPSARASLEAFFPAAIAAWAARFGAH CCCHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ARSG CCCC >Mature Secondary Structure MKPAGAPGRYRGRFAPSPTGPLHFGSLVGALASWLDARAHGGAWLVRIEDVDGPRTVPGA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCH ADAIVSTLAAFGLVADEPPVWQSRRGAAYTAALDALTQAGLVYPCGCTRKEIADSLRAAH HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHH ERHTTLAYPGTCRSGLHGKPARAWRLRVPDGAAARIAFDDRWQGRQTQDLATEVGDFVLR HHCCEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH RADGQWAYQLAVVVDDRDAGITHVVRGADLLDSTARQIHLQRCLGAPTPAYLHVPVVVDA CCCCCEEEEEEEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC NGEKLSKQTGATALDTRTPLVALAAAADHLGLPLAPSARASLEAFFPAAIAAWAARFGAH CCCHHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ARSG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA