| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is qor [H]
Identifier: 238028178
GI number: 238028178
Start: 2996340
End: 2997314
Strand: Reverse
Name: qor [H]
Synonym: bglu_1g26300
Alternate gene names: 238028178
Gene position: 2997314-2996340 (Counterclockwise)
Preceding gene: 238028180
Following gene: 238028177
Centisome position: 76.73
GC content: 69.03
Gene sequence:
>975_bases ATGCCGAAAGCAATCCGTTACGACCAGCCGGGCGGCCCGGAAGTGATGAAATGGGTCGACGTCGAGGCCGCCGAGCCGAA GGCCGGCGAAGTGCGCGTGAAGCACCACGCGGTGGGCCTCAACTACATCGACGTCTATTTTCGCAACGGGCTCTATCCGC AGCCGCTGCCCGGCGGGCTCGGCCAGGAAGGCGCGGGCGAGGTGGTGGAGGTGGGCGAGGGCGTCACGGCGCTGAAGGCG GGCGACCGCGTCGCCTACACCGGCGTGCCGCCCGGCTCGTATGCCGAGGAGCGCGTGCTGCCGGCCGACAAGCTCGTCAG GCTGCCCGATGCGATCGGCTACGAAGACGCCGCCTCGATCATGCTGCAGGGCCTCACCGTGCAATATCTGCTGCGCCGTA CCTATCCGGTCAAGGCCGGCGACACGATCCTGATCCATGCAGCCGCGGGCGGCGTGGGGCTGCTGGCCTGCCAGTGGGCG AAGGCGCTCGGCGCGACGGTGATCGGCACGGTCGGCTCCGACGAGAAGGCCGAGCTGGCGAAGGCGCACGGCTGCGATCA CGCGATCGTCTACACGCGCGAGAATTTCACCGAGCGCGTGAAGGCGATCACGAACGGCGCGGGCGTGCCCGTCGTGTACG ACTCGATCGGCAAGGACACCTACATCGGCTCGCTCGACTGCCTTGCGCCGCTCGGCCTGTTCGTCAGCTTCGGCAACGCG TCCGGGCCGCTGCCGGCGATCGACTCGAAGGAGTTGTCCTCGCGCGGCTCGCTGTTCTTCACGCGGCCGACCTTGTTCAG CTACATCGCCAAGCGCGAGGACCTCGAACGCGGCGCGGCCGAGCTGTTCGAGGCGGTCGCCTCGGGCCAGGTGAAGACCA GCATCCGCCAGCGCTATCCGCTCGAACGCGTGGCCGACGCCCATCGCGACCTCGAGGCGCGCCGCACCACCGGCTCGACG ATCCTGCTGCCGTAA
Upstream 100 bases:
>100_bases GCCACGGTATGTGTCAGCAGAATGTCTTCCGACGAGCGAGAATCCTCGTCCGAGCGGCCAGACGGCCGATTCCCCTTATC TCCAACCAGGAGCAGGACGC
Downstream 100 bases:
>100_bases GCACCGGCACCCGGCATCCGGCTCGACACGGCGGCGCTGCGGCGCCGCCGTGTTCGTTCGCGGCGCCGTGTTTACGCGTT TTTTACACCCCCCGCCCGAG
Product: Quinone oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MPKAIRYDQPGGPEVMKWVDVEAAEPKAGEVRVKHHAVGLNYIDVYFRNGLYPQPLPGGLGQEGAGEVVEVGEGVTALKA GDRVAYTGVPPGSYAEERVLPADKLVRLPDAIGYEDAASIMLQGLTVQYLLRRTYPVKAGDTILIHAAAGGVGLLACQWA KALGATVIGTVGSDEKAELAKAHGCDHAIVYTRENFTERVKAITNGAGVPVVYDSIGKDTYIGSLDCLAPLGLFVSFGNA SGPLPAIDSKELSSRGSLFFTRPTLFSYIAKREDLERGAAELFEAVASGQVKTSIRQRYPLERVADAHRDLEARRTTGST ILLP
Sequences:
>Translated_324_residues MPKAIRYDQPGGPEVMKWVDVEAAEPKAGEVRVKHHAVGLNYIDVYFRNGLYPQPLPGGLGQEGAGEVVEVGEGVTALKA GDRVAYTGVPPGSYAEERVLPADKLVRLPDAIGYEDAASIMLQGLTVQYLLRRTYPVKAGDTILIHAAAGGVGLLACQWA KALGATVIGTVGSDEKAELAKAHGCDHAIVYTRENFTERVKAITNGAGVPVVYDSIGKDTYIGSLDCLAPLGLFVSFGNA SGPLPAIDSKELSSRGSLFFTRPTLFSYIAKREDLERGAAELFEAVASGQVKTSIRQRYPLERVADAHRDLEARRTTGST ILLP >Mature_323_residues PKAIRYDQPGGPEVMKWVDVEAAEPKAGEVRVKHHAVGLNYIDVYFRNGLYPQPLPGGLGQEGAGEVVEVGEGVTALKAG DRVAYTGVPPGSYAEERVLPADKLVRLPDAIGYEDAASIMLQGLTVQYLLRRTYPVKAGDTILIHAAAGGVGLLACQWAK ALGATVIGTVGSDEKAELAKAHGCDHAIVYTRENFTERVKAITNGAGVPVVYDSIGKDTYIGSLDCLAPLGLFVSFGNAS GPLPAIDSKELSSRGSLFFTRPTLFSYIAKREDLERGAAELFEAVASGQVKTSIRQRYPLERVADAHRDLEARRTTGSTI LLP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=327, Percent_Identity=30.5810397553517, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI13236495, Length=327, Percent_Identity=30.5810397553517, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI22538446, Length=337, Percent_Identity=32.9376854599407, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI22538444, Length=337, Percent_Identity=32.9376854599407, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI194239676, Length=328, Percent_Identity=29.5731707317073, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI18379349, Length=313, Percent_Identity=30.9904153354633, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI28557745, Length=226, Percent_Identity=34.070796460177, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI24308257, Length=323, Percent_Identity=26.625386996904, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI197927207, Length=194, Percent_Identity=29.3814432989691, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI67078404, Length=244, Percent_Identity=27.8688524590164, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI47519420, Length=333, Percent_Identity=27.3273273273273, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI41872631, Length=232, Percent_Identity=28.8793103448276, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=49.8470948012232, Blast_Score=315, Evalue=2e-87, Organism=Escherichia coli, GI87081918, Length=328, Percent_Identity=27.4390243902439, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17507255, Length=304, Percent_Identity=27.9605263157895, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17556000, Length=209, Percent_Identity=33.0143540669856, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17536829, Length=313, Percent_Identity=26.8370607028754, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319520, Length=324, Percent_Identity=37.6543209876543, Blast_Score=204, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6323729, Length=322, Percent_Identity=26.3975155279503, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6324486, Length=314, Percent_Identity=27.0700636942675, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323961, Length=327, Percent_Identity=27.82874617737, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319955, Length=325, Percent_Identity=26.7692307692308, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322619, Length=325, Percent_Identity=26.7692307692308, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI45550423, Length=322, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI19920632, Length=324, Percent_Identity=27.4691358024691, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI221330659, Length=324, Percent_Identity=27.4691358024691, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581345, Length=323, Percent_Identity=25.077399380805, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34594; Mature: 34463
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKAIRYDQPGGPEVMKWVDVEAAEPKAGEVRVKHHAVGLNYIDVYFRNGLYPQPLPGGL CCCCCCCCCCCCHHHEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCC GQEGAGEVVEVGEGVTALKAGDRVAYTGVPPGSYAEERVLPADKLVRLPDAIGYEDAASI CCCCCCCCEECCCCEEEEECCCEEEEECCCCCCCCHHCCCCHHHHHHCCCCCCHHHHHHH MLQGLTVQYLLRRTYPVKAGDTILIHAAAGGVGLLACQWAKALGATVIGTVGSDEKAELA HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHH KAHGCDHAIVYTRENFTERVKAITNGAGVPVVYDSIGKDTYIGSLDCLAPLGLFVSFGNA HHCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHEECCCC SGPLPAIDSKELSSRGSLFFTRPTLFSYIAKREDLERGAAELFEAVASGQVKTSIRQRYP CCCCCCCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC LERVADAHRDLEARRTTGSTILLP HHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure PKAIRYDQPGGPEVMKWVDVEAAEPKAGEVRVKHHAVGLNYIDVYFRNGLYPQPLPGGL CCCCCCCCCCCHHHEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCC GQEGAGEVVEVGEGVTALKAGDRVAYTGVPPGSYAEERVLPADKLVRLPDAIGYEDAASI CCCCCCCCEECCCCEEEEECCCEEEEECCCCCCCCHHCCCCHHHHHHCCCCCCHHHHHHH MLQGLTVQYLLRRTYPVKAGDTILIHAAAGGVGLLACQWAKALGATVIGTVGSDEKAELA HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHH KAHGCDHAIVYTRENFTERVKAITNGAGVPVVYDSIGKDTYIGSLDCLAPLGLFVSFGNA HHCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHEECCCC SGPLPAIDSKELSSRGSLFFTRPTLFSYIAKREDLERGAAELFEAVASGQVKTSIRQRYP CCCCCCCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC LERVADAHRDLEARRTTGSTILLP HHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]