| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pssA [H]
Identifier: 238028153
GI number: 238028153
Start: 2968264
End: 2969127
Strand: Reverse
Name: pssA [H]
Synonym: bglu_1g26040
Alternate gene names: 238028153
Gene position: 2969127-2968264 (Counterclockwise)
Preceding gene: 238028154
Following gene: 238028152
Centisome position: 76.0
GC content: 68.17
Gene sequence:
>864_bases TTGGCTGCATTCAAACCGCGCCGGCCGCGCAACGGCAAGTCTCTGCCGCGCTCGTTCCGCCACAACAAGGCGCTCGGCGC CGATACGTCGAGTGCCGAGCCGCGCCGCGCCGCGCGCCAGCAGTTTCTGCGCACGCGCGGCATCTACCTGCTGCCGAACG CGTTCACCACGGCCGCGTTGTTCTGCGGCTTCTTCGCCGTGGTGCAGGCGATGAACGTGCGCTTCGAGGTCGCGGCGATC GCGATCTTCGTGGCGATGGTGCTCGATGGCATGGACGGCCGCGTCGCGCGCATGACCCATACGCAAAGCGCCTTCGGCGA GCAGTTCGACAGCCTGTCGGACATGGTGTCGTTCGGCGTCGCGCCGGCGCTCGTGATGTACGAGTGGGTGCTCAAGGACC TCGGCCGCTGGGGCTGGCTCGCCGCCTTCGTCTACTGTTCGGGGGCCGCGCTGCGGCTCGCGCGCTTCAATACCAACATC GGCGTGGTCGACAAGCGCTTTTTCCAGGGCTTGCCGAGTCCGGCCGCGGCCGCGCTGATCGCCGGCTTCGTCTGGCTCGC CACCGACAACCGCGTGCCGCTCAAGCTCGGCTGGCTGCCGTGGGTCGCGTTCGTGCTGACCATCTACGCGGGCGTGACGA TGGTCTCGAACGCGCCGTTCTACAGCGGCAAGGCGCTCGACGTGCGGCACCGCGTGCCGTTCGCGGCGATCCTGCTGGTA GTGGTCGCGTTCGTGCTCGTCTCGTCAGATCCGCCGCTGATGCTGTTTGGCCTGTTCGTGCTGTACGGCCTGTCCGGCTA CGTGTTCTGGGCCTACATGGCGATTCGCGGCCGCGCCAACCCGGCGCGCTCGGCCAAGTCCTGA
Upstream 100 bases:
>100_bases TGCCGGTCGGCAGCCGCGCCCGCGTATCGATCGGTGAGAAAGTCAGCGCATCGTCCACGATTCTCGCTGAATTGCCGCTG TAAGCGGCAGGGAGGCTCGA
Downstream 100 bases:
>100_bases CACTCGGCCGCGTCCTGGCCGGCCAGGACGCGCGCCCCGGCTCGGCAGGGCGCCCGATTGCATGCGTTCGGGAATGCCGC TATATTGCCCGCCATGTTTT
Product: CDP-diacylglycerol--serine O-phosphatidyltransferse
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAAFKPRRPRNGKSLPRSFRHNKALGADTSSAEPRRAARQQFLRTRGIYLLPNAFTTAALFCGFFAVVQAMNVRFEVAAI AIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNI GVVDKRFFQGLPSPAAAALIAGFVWLATDNRVPLKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILLV VVAFVLVSSDPPLMLFGLFVLYGLSGYVFWAYMAIRGRANPARSAKS
Sequences:
>Translated_287_residues MAAFKPRRPRNGKSLPRSFRHNKALGADTSSAEPRRAARQQFLRTRGIYLLPNAFTTAALFCGFFAVVQAMNVRFEVAAI AIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNI GVVDKRFFQGLPSPAAAALIAGFVWLATDNRVPLKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILLV VVAFVLVSSDPPLMLFGLFVLYGLSGYVFWAYMAIRGRANPARSAKS >Mature_286_residues AAFKPRRPRNGKSLPRSFRHNKALGADTSSAEPRRAARQQFLRTRGIYLLPNAFTTAALFCGFFAVVQAMNVRFEVAAIA IFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNIG VVDKRFFQGLPSPAAAALIAGFVWLATDNRVPLKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILLVV VAFVLVSSDPPLMLFGLFVLYGLSGYVFWAYMAIRGRANPARSAKS
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=141, Percent_Identity=35.4609929078014, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 31547; Mature: 31416
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFKPRRPRNGKSLPRSFRHNKALGADTSSAEPRRAARQQFLRTRGIYLLPNAFTTAAL CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCHHHHHHH FCGFFAVVQAMNVRFEVAAIAIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGV HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNIGVVDKRFFQGLPSPAAAALI HHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHEEEHCCCCCCCCHHHHHCCCCCHHHHHHH AGFVWLATDNRVPLKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILLV HHHHHEECCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHCCCHHHHHHH VVAFVLVSSDPPLMLFGLFVLYGLSGYVFWAYMAIRGRANPARSAKS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AAFKPRRPRNGKSLPRSFRHNKALGADTSSAEPRRAARQQFLRTRGIYLLPNAFTTAAL CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCHHHHHHH FCGFFAVVQAMNVRFEVAAIAIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGV HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APALVMYEWVLKDLGRWGWLAAFVYCSGAALRLARFNTNIGVVDKRFFQGLPSPAAAALI HHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHEEEHCCCCCCCCHHHHHCCCCCHHHHHHH AGFVWLATDNRVPLKLGWLPWVAFVLTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILLV HHHHHEECCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHCCCHHHHHHH VVAFVLVSSDPPLMLFGLFVLYGLSGYVFWAYMAIRGRANPARSAKS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]