| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is secG [H]
Identifier: 238028144
GI number: 238028144
Start: 2957696
End: 2958073
Strand: Reverse
Name: secG [H]
Synonym: bglu_1g25950
Alternate gene names: 238028144
Gene position: 2958073-2957696 (Counterclockwise)
Preceding gene: 238028145
Following gene: 238028143
Centisome position: 75.72
GC content: 67.99
Gene sequence:
>378_bases ATGTCTTTTTTGAAAGTCTTGATTATCGTGGTGCAGATTCTGTCCGCGCTCGGCGTGATCGGCCTCGTGCTGCTCCAGCA CGGCAAGGGGGCCGACATGGGCGCCGCGTTCGGCAGCGGCGCATCGGGTAGCCTGTTCGGCGCGACCGGCTCGGCGAATT TCCTGTCGCGTACCACTGCGGTCCTTGCCACGGTATTTTTCGTCGCCACGCTGGCGCTGACCTATCTCGGCTCGTATAAA TCGGCGCCGTCGATCGGTGTGCTCGGCACGCCCGCCTCGGCGCCCGCCGCCTCGTCGGCGGGTTCGCAGCCCGCGGCCGC CTCGGCGCCGGCCGCGGGTTCGGCCGCCTCGGCACCGGGCCAGGACGTCCCGAAATAA
Upstream 100 bases:
>100_bases TCTGCCGCGCGGCGCAGTAAGCGCCGCCGCAGGGGGCGGGCGTTTTTTTGAATCCGGGGCAGCGCGCGGCGCGCGGTTTC CCACTATTCGGGTGAGTGAG
Downstream 100 bases:
>100_bases AAGATCAAAAAAATCGCGCAGAGTAGTTGATCAGGTTTGAAAGCCGGGTTAGAATTTATTTCTTCAAGCGGTTCGCGGAA AGCGAGTGATTGTTCCCGGG
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSFLKVLIIVVQILSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTAVLATVFFVATLALTYLGSYK SAPSIGVLGTPASAPAASSAGSQPAAASAPAAGSAASAPGQDVPK
Sequences:
>Translated_125_residues MSFLKVLIIVVQILSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTAVLATVFFVATLALTYLGSYK SAPSIGVLGTPASAPAASSAGSQPAAASAPAAGSAASAPGQDVPK >Mature_124_residues SFLKVLIIVVQILSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTAVLATVFFVATLALTYLGSYKS APSIGVLGTPASAPAASSAGSQPAAASAPAAGSAASAPGQDVPK
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
Organism=Escherichia coli, GI1789565, Length=105, Percent_Identity=47.6190476190476, Blast_Score=95, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 11923; Mature: 11792
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLKVLIIVVQILSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH VLATVFFVATLALTYLGSYKSAPSIGVLGTPASAPAASSAGSQPAAASAPAAGSAASAPG HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QDVPK CCCCC >Mature Secondary Structure SFLKVLIIVVQILSALGVIGLVLLQHGKGADMGAAFGSGASGSLFGATGSANFLSRTTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH VLATVFFVATLALTYLGSYKSAPSIGVLGTPASAPAASSAGSQPAAASAPAAGSAASAPG HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QDVPK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]