| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is nuoL [H]
Identifier: 238028132
GI number: 238028132
Start: 2945466
End: 2947511
Strand: Reverse
Name: nuoL [H]
Synonym: bglu_1g25830
Alternate gene names: 238028132
Gene position: 2947511-2945466 (Counterclockwise)
Preceding gene: 238028133
Following gene: 238028131
Centisome position: 75.45
GC content: 62.37
Gene sequence:
>2046_bases ATGTCGACCACACTCAATGAAAATCTGCTGCTCGCGATCGCGCTCGCGCCGCTTGCCGGCTCGATCATCGCCGGCCTGTT CGGCAACACGGTCGGGCGCAAGGGCGCGCACCGCGTGACGATCCTCGGCGTGACGATCTCGTTCGTCCTGTCGATGGTGG TGTTCCTGCAGGTGCTGGACGGCGCGAGCTTCAACGCGACCGTCTACGAATGGATGCACGTCGGGCCGCTCAAGCTCGAA GTCGGCTTTCTCGTCGATTCGCTGACGGCGATGATGATGGTCGTCGTGACCTTCGTCTCGCTGATGGTGCATGTCTACAC GATCGGCTACATGCAGGACGAGGACGGCTACCAGCGCTTCTTCTCCTACATCTCGCTGTTCACGTTCTCGATGCTGATGC TCGTGATGAGCAACAACTTCCTGCAGCTGTTCTTCGGCTGGGAAGCGGTCGGCCTCGTGTCCTACCTGCTGATCGGCTTC TACTTCACGCGGGAAAGCGCGATCTACGCGAACATGAAGGCGTTCATCGTCAACCGCGTCGGCGATTTCGGCTTCCTGCT CGGCATCGGCCTGCTGCTCGCCTATGCCGGCTCGATGAACTACGGCGAGGTGTTCGCCAAGAGCACCGCGCTGGCCGCGA TGCATTTCCCGGGCACCAACTGGGGCCTGCTGACGGTGGCCTGCATCTGCCTGTTCATCGGCGCGATGGGCAAGTCGGCG CAGTTCCCGCTGCACGTCTGGCTGCCCGACTCGATGGAAGGCCCCACGCCGATCTCGGCGCTGATCCACGCGGCCACCAT GGTGACGGCCGGCGTGTTCATGGTCACGCGCATGTCGCCGCTGTTCGAACTGTCCGACACCGCGCTGTCGTTCATCACCG TGATCGGCGCGATCACGGCGCTGTTCATGGGCTTCCTCGGGGTGATCCAGAACGACATCAAGCGCGTGGTCGCGTACTCG ACGCTCTCGCAGCTCGGCTACATGACGGTCGCGCTCGGCGTGTCGGCCTACCCGGTCGCCGTGTTCCACCTGATGACGCA CGCGTTCTTCAAGGCGCTGCTGTTCCTCGCGGCCGGCTCGGTGATCATCGGCATGCACCACGACCAGGACATCCGCAACA TGGGCGGCCTGCGCAAGTACATGCCGATCACCTGGATCACCTCGCTGGTCGGTTCGCTCGCCCTGATCGGTACGCCGTTC TTCTCGGGTTTCTACTCGAAGGACTCGATCATCGACGCGGTGAAACTGTCGCACCTGCCGGGCTCTGGTTTCGCGTATTT TGCAGTGGTCGCCAGTGTCTTCGTGACCGCCCTCTATTCGTTCCGCATGTATTTCCTGGTGTTCCACGGTGAAGAGCGCT TCCGCAAGCCGAAGCATCCCGATTCGCCGATGGGCAAGGCCGCCGCGCAGGGTCATGACGCGCACGGCCACCACGATGAT CATGTCCACGAACCGCACGAAACGTCGTGGGTCGTCTGGTTGCCGCTCGTGTTGCTCGCGATTCCGTCGGTGGTGATCGG CGCGATCGCGATCGGCCCGATGCTGTTCGGCGATTTCTTCCAGCACGGCGTCGCGTTCGACAAGGTGATCTTCATCGGCC AGAATCACCCGGCAGTCGCCGAGATGGCCGATGAATTCCACGGCTGGGCCGCGATGGGCCTGCACTCGGTGACGGGCCTG CCGGTCTGGCTCGCACTGGCTGGCGTCGTCGTCGCCTGGTTCCTGTATCTGAAGCGCCCGGATCTGTCGGCGGCGATTCG CCGTGCGGCCGGCCCGATCTATACGCTGCTCGATAACAAATACTACATGGACAAGATCAACGAGGTCGTATTCGCCAGGG GTTCGGTTGCAGTCGGCCGTGGCCTCTGGAAAGAGGGCGACGTCGTCGTGATCGATGGGCTCGTCAACGGCAGTGCGCGG TTCGTCAGCTGGTTCGCCGGCGTGATCCGCTTCCTGCAGTCCGGCTACATTTATCACTACGCGTTCGCGATGATCATTGG CATGTTGGGTCTCCTCACCCTGTTTGTTACGCTCGGCGGCAAATAA
Upstream 100 bases:
>100_bases CGATCGGCCTGGCAATCCTGGTCACGCTGTTCCGCAAACTCGACACCATCAACGTCGAGGATCTCGACCAGCTCAAGGGC TAATCTCAGGCGAGTCTGCT
Downstream 100 bases:
>100_bases GAAAGGAGAGGAACCCACTCATGCCCGCATTTCCGATTCTCAGTACCGCCATCTGGCTTCCGATCGTGTTCGGCCTCGTG ATTCTGGCCATCGGCACGGA
Product: NADH:ubiquinone oxidoreductase subunit L
Products: NA
Alternate protein names: NADH dehydrogenase I subunit L; NDH-1 subunit L [H]
Number of amino acids: Translated: 681; Mature: 680
Protein sequence:
>681_residues MSTTLNENLLLAIALAPLAGSIIAGLFGNTVGRKGAHRVTILGVTISFVLSMVVFLQVLDGASFNATVYEWMHVGPLKLE VGFLVDSLTAMMMVVVTFVSLMVHVYTIGYMQDEDGYQRFFSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGF YFTRESAIYANMKAFIVNRVGDFGFLLGIGLLLAYAGSMNYGEVFAKSTALAAMHFPGTNWGLLTVACICLFIGAMGKSA QFPLHVWLPDSMEGPTPISALIHAATMVTAGVFMVTRMSPLFELSDTALSFITVIGAITALFMGFLGVIQNDIKRVVAYS TLSQLGYMTVALGVSAYPVAVFHLMTHAFFKALLFLAAGSVIIGMHHDQDIRNMGGLRKYMPITWITSLVGSLALIGTPF FSGFYSKDSIIDAVKLSHLPGSGFAYFAVVASVFVTALYSFRMYFLVFHGEERFRKPKHPDSPMGKAAAQGHDAHGHHDD HVHEPHETSWVVWLPLVLLAIPSVVIGAIAIGPMLFGDFFQHGVAFDKVIFIGQNHPAVAEMADEFHGWAAMGLHSVTGL PVWLALAGVVVAWFLYLKRPDLSAAIRRAAGPIYTLLDNKYYMDKINEVVFARGSVAVGRGLWKEGDVVVIDGLVNGSAR FVSWFAGVIRFLQSGYIYHYAFAMIIGMLGLLTLFVTLGGK
Sequences:
>Translated_681_residues MSTTLNENLLLAIALAPLAGSIIAGLFGNTVGRKGAHRVTILGVTISFVLSMVVFLQVLDGASFNATVYEWMHVGPLKLE VGFLVDSLTAMMMVVVTFVSLMVHVYTIGYMQDEDGYQRFFSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGF YFTRESAIYANMKAFIVNRVGDFGFLLGIGLLLAYAGSMNYGEVFAKSTALAAMHFPGTNWGLLTVACICLFIGAMGKSA QFPLHVWLPDSMEGPTPISALIHAATMVTAGVFMVTRMSPLFELSDTALSFITVIGAITALFMGFLGVIQNDIKRVVAYS TLSQLGYMTVALGVSAYPVAVFHLMTHAFFKALLFLAAGSVIIGMHHDQDIRNMGGLRKYMPITWITSLVGSLALIGTPF FSGFYSKDSIIDAVKLSHLPGSGFAYFAVVASVFVTALYSFRMYFLVFHGEERFRKPKHPDSPMGKAAAQGHDAHGHHDD HVHEPHETSWVVWLPLVLLAIPSVVIGAIAIGPMLFGDFFQHGVAFDKVIFIGQNHPAVAEMADEFHGWAAMGLHSVTGL PVWLALAGVVVAWFLYLKRPDLSAAIRRAAGPIYTLLDNKYYMDKINEVVFARGSVAVGRGLWKEGDVVVIDGLVNGSAR FVSWFAGVIRFLQSGYIYHYAFAMIIGMLGLLTLFVTLGGK >Mature_680_residues STTLNENLLLAIALAPLAGSIIAGLFGNTVGRKGAHRVTILGVTISFVLSMVVFLQVLDGASFNATVYEWMHVGPLKLEV GFLVDSLTAMMMVVVTFVSLMVHVYTIGYMQDEDGYQRFFSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFY FTRESAIYANMKAFIVNRVGDFGFLLGIGLLLAYAGSMNYGEVFAKSTALAAMHFPGTNWGLLTVACICLFIGAMGKSAQ FPLHVWLPDSMEGPTPISALIHAATMVTAGVFMVTRMSPLFELSDTALSFITVIGAITALFMGFLGVIQNDIKRVVAYST LSQLGYMTVALGVSAYPVAVFHLMTHAFFKALLFLAAGSVIIGMHHDQDIRNMGGLRKYMPITWITSLVGSLALIGTPFF SGFYSKDSIIDAVKLSHLPGSGFAYFAVVASVFVTALYSFRMYFLVFHGEERFRKPKHPDSPMGKAAAQGHDAHGHHDDH VHEPHETSWVVWLPLVLLAIPSVVIGAIAIGPMLFGDFFQHGVAFDKVIFIGQNHPAVAEMADEFHGWAAMGLHSVTGLP VWLALAGVVVAWFLYLKRPDLSAAIRRAAGPIYTLLDNKYYMDKINEVVFARGSVAVGRGLWKEGDVVVIDGLVNGSARF VSWFAGVIRFLQSGYIYHYAFAMIIGMLGLLTLFVTLGGK
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1009
COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 5 family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=386, Percent_Identity=40.1554404145078, Blast_Score=289, Evalue=7e-78, Organism=Escherichia coli, GI1788614, Length=610, Percent_Identity=38.8524590163934, Blast_Score=358, Evalue=1e-100, Organism=Escherichia coli, GI1788829, Length=417, Percent_Identity=29.7362110311751, Blast_Score=152, Evalue=5e-38, Organism=Escherichia coli, GI1788831, Length=396, Percent_Identity=29.2929292929293, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1788827, Length=402, Percent_Identity=28.6069651741293, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI2367154, Length=128, Percent_Identity=34.375, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI145693160, Length=227, Percent_Identity=25.9911894273128, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1788613, Length=398, Percent_Identity=23.3668341708543, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001750 - InterPro: IPR001516 - InterPro: IPR002128 - InterPro: IPR003945 - InterPro: IPR018393 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF01010 Oxidored_q1_C; PF00662 Oxidored_q1_N [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 74372; Mature: 74240
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLNENLLLAIALAPLAGSIIAGLFGNTVGRKGAHRVTILGVTISFVLSMVVFLQVLD CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC GASFNATVYEWMHVGPLKLEVGFLVDSLTAMMMVVVTFVSLMVHVYTIGYMQDEDGYQRF CCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHH FSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFYFTRESAIYANMKAFIVNRV HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC GDFGFLLGIGLLLAYAGSMNYGEVFAKSTALAAMHFPGTNWGLLTVACICLFIGAMGKSA CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCC QFPLHVWLPDSMEGPTPISALIHAATMVTAGVFMVTRMSPLFELSDTALSFITVIGAITA CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LFMGFLGVIQNDIKRVVAYSTLSQLGYMTVALGVSAYPVAVFHLMTHAFFKALLFLAAGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC VIIGMHHDQDIRNMGGLRKYMPITWITSLVGSLALIGTPFFSGFYSKDSIIDAVKLSHLP EEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHCCCC GSGFAYFAVVASVFVTALYSFRMYFLVFHGEERFRKPKHPDSPMGKAAAQGHDAHGHHDD CCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCCCCCCCCCHHHHCCCCCCCCCCC HVHEPHETSWVVWLPLVLLAIPSVVIGAIAIGPMLFGDFFQHGVAFDKVIFIGQNHPAVA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHH EMADEFHGWAAMGLHSVTGLPVWLALAGVVVAWFLYLKRPDLSAAIRRAAGPIYTLLDNK HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEHHCCC YYMDKINEVVFARGSVAVGRGLWKEGDVVVIDGLVNGSARFVSWFAGVIRFLQSGYIYHY HHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHH AFAMIIGMLGLLTLFVTLGGK HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STTLNENLLLAIALAPLAGSIIAGLFGNTVGRKGAHRVTILGVTISFVLSMVVFLQVLD CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC GASFNATVYEWMHVGPLKLEVGFLVDSLTAMMMVVVTFVSLMVHVYTIGYMQDEDGYQRF CCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHH FSYISLFTFSMLMLVMSNNFLQLFFGWEAVGLVSYLLIGFYFTRESAIYANMKAFIVNRV HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC GDFGFLLGIGLLLAYAGSMNYGEVFAKSTALAAMHFPGTNWGLLTVACICLFIGAMGKSA CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCC QFPLHVWLPDSMEGPTPISALIHAATMVTAGVFMVTRMSPLFELSDTALSFITVIGAITA CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LFMGFLGVIQNDIKRVVAYSTLSQLGYMTVALGVSAYPVAVFHLMTHAFFKALLFLAAGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC VIIGMHHDQDIRNMGGLRKYMPITWITSLVGSLALIGTPFFSGFYSKDSIIDAVKLSHLP EEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHCCCC GSGFAYFAVVASVFVTALYSFRMYFLVFHGEERFRKPKHPDSPMGKAAAQGHDAHGHHDD CCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCCCCCCCCCHHHHCCCCCCCCCCC HVHEPHETSWVVWLPLVLLAIPSVVIGAIAIGPMLFGDFFQHGVAFDKVIFIGQNHPAVA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHH EMADEFHGWAAMGLHSVTGLPVWLALAGVVVAWFLYLKRPDLSAAIRRAAGPIYTLLDNK HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEHHCCC YYMDKINEVVFARGSVAVGRGLWKEGDVVVIDGLVNGSARFVSWFAGVIRFLQSGYIYHY HHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHH AFAMIIGMLGLLTLFVTLGGK HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]