| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028121
Identifier: 238028121
GI number: 238028121
Start: 2935021
End: 2936130
Strand: Direct
Name: 238028121
Synonym: bglu_1g25720
Alternate gene names: NA
Gene position: 2935021-2936130 (Clockwise)
Preceding gene: 238028120
Following gene: 238028122
Centisome position: 75.13
GC content: 70.36
Gene sequence:
>1110_bases ATGACACAATCGCCGCAGCACCCGGCAGCGAACCCGGCCGACACCACCGCGTTCGAGGGCACCGGGCCCGTGAGCGCCGC GCAGCGCATCGACGGGCCCGCGCTCGACGCCTGGCTCGCGGGCCACGTCGAGGGCTACGCCGGACCGCTGTCGATCGAGC AATTCCGCGGCGGCCAGTCCAATCCGACCTTCAAGCTCGTCACGCCGGCACGGCACTACGTGCTGCGCGCCAAGCCGGCG CCGGCGGCGAAGCTGCTGCCGTCGGCGCACGCGATCGAGCGTGAATACCGCGTGATGGCCGCGCTCGACGGCACCGCAGT ACCGGTGCCGCGGGTGCTCGCGCTCTGCGAGGACGAAACCGTGATCGGCCGCGCGTTCTACGTGATGAGCTGCGTGGAGG GGCGTGTGTACTGGGACCCGTCGCTGCCCGGCATGACGCGCGCCGAGCGGGCCGCGCACTACGACGAGATGAATCGCGTG ATCGCCGCGCTGCACGCGCTCGATCCGCAGGCCCTCGGCCTCGGCGACTACGGCAAGCCGGGCAGCTATTTCGCGCGCCA GATCGCACGCTGGAGCAAGCAGTACCTGGCTTCGGAGACCGAGCCGATCGATGCAATGCACCGGCTGATCGAATGGCTGC CGCAACATCTGCCGCCCGGCGATACCGGCCGCGAGCACACGTCGATCGTGCACGGCGACTTCCGCCTCGACAACCTGATC TTCGCGCCCGACGCGCCGCGCGTGCTGGCCGTGCTCGACTGGGAACTGTCGACGCTCGGCGACCCGCTCGCCGATTTCTC GTATCACTGCATGACCTGGCACGTCGAGCCGGGGCGCTTTCGCGGCGTGGCCGGCCTCGACTGGGGCGCGCTCGGAATTC CCGACGAGGCGGCCTACATCGCGCGCTACCGCGAGCGCACGGGCTTCACGATCGAAGGCGACTGGCACTTCTATCTCGCC TACAACATGTTCCGGATCGCCGCGATCCTGCAGGGCATCATGAAGCGCGTGGCCGAGGGCACCGCATCGAGCGCACGCGC GCTCGATGCCGGCCGGCAGGCCCGCCCGATGGCCGAACTCGCGTGGCGCTACGCGCAGCGCGTGGCCTGA
Upstream 100 bases:
>100_bases GCACCGCGACGCACGCAACACCGTGATGGAAGTGCTCTACCAACAGTTCGTCGAAGCGAACGCGGGCCGCTGAGCCCACG CCGCGCAACCGGAGGCAACG
Downstream 100 bases:
>100_bases CGAGCCGGCCGCCGCTCCGCTTTCGATCAACGATCCACTCTCAGCGAGGTTGCGATGGATTTCGATTACTCCCCGAAGGT CGATGTACTGCGCGAACGGC
Product: phosphotransferase enzyme family protein
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTQSPQHPAANPADTTAFEGTGPVSAAQRIDGPALDAWLAGHVEGYAGPLSIEQFRGGQSNPTFKLVTPARHYVLRAKPA PAAKLLPSAHAIEREYRVMAALDGTAVPVPRVLALCEDETVIGRAFYVMSCVEGRVYWDPSLPGMTRAERAAHYDEMNRV IAALHALDPQALGLGDYGKPGSYFARQIARWSKQYLASETEPIDAMHRLIEWLPQHLPPGDTGREHTSIVHGDFRLDNLI FAPDAPRVLAVLDWELSTLGDPLADFSYHCMTWHVEPGRFRGVAGLDWGALGIPDEAAYIARYRERTGFTIEGDWHFYLA YNMFRIAAILQGIMKRVAEGTASSARALDAGRQARPMAELAWRYAQRVA
Sequences:
>Translated_369_residues MTQSPQHPAANPADTTAFEGTGPVSAAQRIDGPALDAWLAGHVEGYAGPLSIEQFRGGQSNPTFKLVTPARHYVLRAKPA PAAKLLPSAHAIEREYRVMAALDGTAVPVPRVLALCEDETVIGRAFYVMSCVEGRVYWDPSLPGMTRAERAAHYDEMNRV IAALHALDPQALGLGDYGKPGSYFARQIARWSKQYLASETEPIDAMHRLIEWLPQHLPPGDTGREHTSIVHGDFRLDNLI FAPDAPRVLAVLDWELSTLGDPLADFSYHCMTWHVEPGRFRGVAGLDWGALGIPDEAAYIARYRERTGFTIEGDWHFYLA YNMFRIAAILQGIMKRVAEGTASSARALDAGRQARPMAELAWRYAQRVA >Mature_368_residues TQSPQHPAANPADTTAFEGTGPVSAAQRIDGPALDAWLAGHVEGYAGPLSIEQFRGGQSNPTFKLVTPARHYVLRAKPAP AAKLLPSAHAIEREYRVMAALDGTAVPVPRVLALCEDETVIGRAFYVMSCVEGRVYWDPSLPGMTRAERAAHYDEMNRVI AALHALDPQALGLGDYGKPGSYFARQIARWSKQYLASETEPIDAMHRLIEWLPQHLPPGDTGREHTSIVHGDFRLDNLIF APDAPRVLAVLDWELSTLGDPLADFSYHCMTWHVEPGRFRGVAGLDWGALGIPDEAAYIARYRERTGFTIEGDWHFYLAY NMFRIAAILQGIMKRVAEGTASSARALDAGRQARPMAELAWRYAQRVA
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=352, Percent_Identity=49.7159090909091, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI211971008, Length=352, Percent_Identity=49.7159090909091, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI38505218, Length=349, Percent_Identity=39.8280802292264, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17562446, Length=327, Percent_Identity=38.5321100917431, Blast_Score=221, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40686; Mature: 40554
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSPQHPAANPADTTAFEGTGPVSAAQRIDGPALDAWLAGHVEGYAGPLSIEQFRGGQS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCC NPTFKLVTPARHYVLRAKPAPAAKLLPSAHAIEREYRVMAALDGTAVPVPRVLALCEDET CCCEEEECCCCEEEEECCCCCHHHHCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCH VIGRAFYVMSCVEGRVYWDPSLPGMTRAERAAHYDEMNRVIAALHALDPQALGLGDYGKP HHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GSYFARQIARWSKQYLASETEPIDAMHRLIEWLPQHLPPGDTGREHTSIVHGDFRLDNLI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEECCEE FAPDAPRVLAVLDWELSTLGDPLADFSYHCMTWHVEPGRFRGVAGLDWGALGIPDEAAYI ECCCCCCEEEEEECCHHHCCCCHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH ARYRERTGFTIEGDWHFYLAYNMFRIAAILQGIMKRVAEGTASSARALDAGRQARPMAEL HHHHHHCCCEEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHH AWRYAQRVA HHHHHHHCC >Mature Secondary Structure TQSPQHPAANPADTTAFEGTGPVSAAQRIDGPALDAWLAGHVEGYAGPLSIEQFRGGQS CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCC NPTFKLVTPARHYVLRAKPAPAAKLLPSAHAIEREYRVMAALDGTAVPVPRVLALCEDET CCCEEEECCCCEEEEECCCCCHHHHCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCH VIGRAFYVMSCVEGRVYWDPSLPGMTRAERAAHYDEMNRVIAALHALDPQALGLGDYGKP HHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GSYFARQIARWSKQYLASETEPIDAMHRLIEWLPQHLPPGDTGREHTSIVHGDFRLDNLI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEECCEE FAPDAPRVLAVLDWELSTLGDPLADFSYHCMTWHVEPGRFRGVAGLDWGALGIPDEAAYI ECCCCCCEEEEEECCHHHCCCCHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH ARYRERTGFTIEGDWHFYLAYNMFRIAAILQGIMKRVAEGTASSARALDAGRQARPMAEL HHHHHHCCCEEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHH AWRYAQRVA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA