| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028097
Identifier: 238028097
GI number: 238028097
Start: 2907120
End: 2907605
Strand: Direct
Name: 238028097
Synonym: bglu_1g25480
Alternate gene names: NA
Gene position: 2907120-2907605 (Clockwise)
Preceding gene: 238028096
Following gene: 238028098
Centisome position: 74.42
GC content: 65.02
Gene sequence:
>486_bases TTGAATTTTGAACACCTGATCCAGATCAACGCAACGGACGACCCGACGTTGCCGACGCTCACGCGCGACCAGCTCTGGGA AGGGCTCGTGCTGCGCGCCGAACAGCCACAGCTGTTCGTGATCGGCCTCGATCGCTGCGAGATCCGCGAGCGCACCGAGA CGACGCTCGAACGCGAGCTGCATTTCGGTCAGGCGAGGATCCGCGATCGCGTGACGTTCACGACGAACCATCAGGTCCGC TACGACATCCACGCCGCCGACGGCGAGATCGGCGGCTCGCTGACGATGACGATCGAGGAACGCGCCGACGCCGAGCTGTT CCTGCGCTTCGAATACCACACCACACTGCCCGAGACGGCCGACAGCGAAGACGCGCGGCAGACGCAGGGCATCGTCAAGG AGGCCTACCGCACCTCCGACATCGATACGGTGCGCCTGATCCGCGAATACGCCCAGGGCCGCCGGGATCCCGATCCGCTG CACTGA
Upstream 100 bases:
>100_bases CGCGATCCAGGGCTGAGCCGCGCCGGACGAGGTTTGCGAATTGCGTCACAATGGTTCCTGTTGCGGCTTGCGGCCGCGTC GACAGAAGGAACCCGTACCC
Downstream 100 bases:
>100_bases AGGCGCTGCGTGCCGGCGCCGCCTGGGGCGTTGCCGGCACGGATTTCACAAAAGCTATCAAGCTCGGCATTTCGATGAAA AACATCGTTTGTAAATGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNFEHLIQINATDDPTLPTLTRDQLWEGLVLRAEQPQLFVIGLDRCEIRERTETTLERELHFGQARIRDRVTFTTNHQVR YDIHAADGEIGGSLTMTIEERADAELFLRFEYHTTLPETADSEDARQTQGIVKEAYRTSDIDTVRLIREYAQGRRDPDPL H
Sequences:
>Translated_161_residues MNFEHLIQINATDDPTLPTLTRDQLWEGLVLRAEQPQLFVIGLDRCEIRERTETTLERELHFGQARIRDRVTFTTNHQVR YDIHAADGEIGGSLTMTIEERADAELFLRFEYHTTLPETADSEDARQTQGIVKEAYRTSDIDTVRLIREYAQGRRDPDPL H >Mature_161_residues MNFEHLIQINATDDPTLPTLTRDQLWEGLVLRAEQPQLFVIGLDRCEIRERTETTLERELHFGQARIRDRVTFTTNHQVR YDIHAADGEIGGSLTMTIEERADAELFLRFEYHTTLPETADSEDARQTQGIVKEAYRTSDIDTVRLIREYAQGRRDPDPL H
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18722; Mature: 18722
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFEHLIQINATDDPTLPTLTRDQLWEGLVLRAEQPQLFVIGLDRCEIRERTETTLEREL CCCCEEEEEECCCCCCCCCCCHHHHHCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH HFGQARIRDRVTFTTNHQVRYDIHAADGEIGGSLTMTIEERADAELFLRFEYHTTLPETA HHCHHHHCCCEEEEECCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCC DSEDARQTQGIVKEAYRTSDIDTVRLIREYAQGRRDPDPLH CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNFEHLIQINATDDPTLPTLTRDQLWEGLVLRAEQPQLFVIGLDRCEIRERTETTLEREL CCCCEEEEEECCCCCCCCCCCHHHHHCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH HFGQARIRDRVTFTTNHQVRYDIHAADGEIGGSLTMTIEERADAELFLRFEYHTTLPETA HHCHHHHCCCEEEEECCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCC DSEDARQTQGIVKEAYRTSDIDTVRLIREYAQGRRDPDPLH CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA