| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is murI [H]
Identifier: 238028090
GI number: 238028090
Start: 2901307
End: 2902167
Strand: Direct
Name: murI [H]
Synonym: bglu_1g25410
Alternate gene names: 238028090
Gene position: 2901307-2902167 (Clockwise)
Preceding gene: 238028089
Following gene: 238028091
Centisome position: 74.27
GC content: 73.05
Gene sequence:
>861_bases ATGTCCAGCCCGCCCGCCTTCGCGCCAGCCTGCGCCGCCGCACCGGTCGGCATCTTCGATTCCGGGCTGGGCGGCCTGTC GGTCCTGCGCGCCGCGCGCGCGCACCTGCCCGACGAGGCCTTCGTCTATGTCGCCGATTCGCGCTACGCCCCCTATGGCG AGCGCGACGATGCCTTCATCATCGAGCGCACGCTCGCGATCGGCGAATGGCTTGCCGCCCGCGGCGCAAAGGCGCTCGTG GTCGCCTGCAACACCGCCACCGCGCAATCGATCGCCGTGGTGCGCGAGACGCTGGCGATTCCGCTGATCGGCGTCGAGCC CGGCATCAAGCCCGCCGCGCTTGCGTCGACGAGCCGCGTGGCCGGCGTGCTGGCCACCGCGGCGACACTGCGCAGCGCCC GCTTCGAGGCGCTGATCGCGCGCCACGCCGGCGACTGCCGGTTCCTGCTCCAGCCGGGGCACGGCCTCGTGCAGGCCATC GAGCGCGGCGACACCGGCTCCGCCGGGCTGCGCACGCTGCTGGCCGGCTATCTGGAGCCGATGCTCGCCGCCGGTGCCGA CACGCTGGTGCTCGGCTGCACCCACTACCCGTTTCTCGACGCCACGATCCGCGAGCTGACGCAAAATCGTCTGACCCTCG TTGATACCGGCGAGGCGATCGCGCGCCAACTGGCGCGCGTGCTCGACGAACACGGCCTGCGCTCGCCGGCCGGTGCCGAA CCGCCGCCGACCCGCCTCTATTCCACCGACGACGGCACCCGCCTGCAGGCACTGGCCGCCACGCTGCTCGGCCTCGACGC CAGCGCCGAAACGATATCGATTCCGTCGCCGCGCGCGGCGGCCGCCGCGCTGAGTGCCTGA
Upstream 100 bases:
>100_bases GCAAGGTCGGCATCCAGAACTACCAGCAGTCCATGATGGGCTCGCCGTCGTAAGCGTGGCGTCGTAAGATGGCGGACCGC CATCCGCCGCTTGCCCCGCC
Downstream 100 bases:
>100_bases GGCGCGGCGCGCCACGGCTCGACATCCGTTTCGGCGCTCCCCTGCTAAGCATCTGGATTGGTTACAAAAAACCGCGCGAT GGACTTGCCAAGCCACCCGA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSSPPAFAPACAAAPVGIFDSGLGGLSVLRAARAHLPDEAFVYVADSRYAPYGERDDAFIIERTLAIGEWLAARGAKALV VACNTATAQSIAVVRETLAIPLIGVEPGIKPAALASTSRVAGVLATAATLRSARFEALIARHAGDCRFLLQPGHGLVQAI ERGDTGSAGLRTLLAGYLEPMLAAGADTLVLGCTHYPFLDATIRELTQNRLTLVDTGEAIARQLARVLDEHGLRSPAGAE PPPTRLYSTDDGTRLQALAATLLGLDASAETISIPSPRAAAAALSA
Sequences:
>Translated_286_residues MSSPPAFAPACAAAPVGIFDSGLGGLSVLRAARAHLPDEAFVYVADSRYAPYGERDDAFIIERTLAIGEWLAARGAKALV VACNTATAQSIAVVRETLAIPLIGVEPGIKPAALASTSRVAGVLATAATLRSARFEALIARHAGDCRFLLQPGHGLVQAI ERGDTGSAGLRTLLAGYLEPMLAAGADTLVLGCTHYPFLDATIRELTQNRLTLVDTGEAIARQLARVLDEHGLRSPAGAE PPPTRLYSTDDGTRLQALAATLLGLDASAETISIPSPRAAAAALSA >Mature_285_residues SSPPAFAPACAAAPVGIFDSGLGGLSVLRAARAHLPDEAFVYVADSRYAPYGERDDAFIIERTLAIGEWLAARGAKALVV ACNTATAQSIAVVRETLAIPLIGVEPGIKPAALASTSRVAGVLATAATLRSARFEALIARHAGDCRFLLQPGHGLVQAIE RGDTGSAGLRTLLAGYLEPMLAAGADTLVLGCTHYPFLDATIRELTQNRLTLVDTGEAIARQLARVLDEHGLRSPAGAEP PPTRLYSTDDGTRLQALAATLLGLDASAETISIPSPRAAAAALSA
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=234, Percent_Identity=38.4615384615385, Blast_Score=138, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 29525; Mature: 29394
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPPAFAPACAAAPVGIFDSGLGGLSVLRAARAHLPDEAFVYVADSRYAPYGERDDAFI CCCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHH IERTLAIGEWLAARGAKALVVACNTATAQSIAVVRETLAIPLIGVEPGIKPAALASTSRV HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHH AGVLATAATLRSARFEALIARHAGDCRFLLQPGHGLVQAIERGDTGSAGLRTLLAGYLEP HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHH MLAAGADTLVLGCTHYPFLDATIRELTQNRLTLVDTGEAIARQLARVLDEHGLRSPAGAE HHHCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCC PPPTRLYSTDDGTRLQALAATLLGLDASAETISIPSPRAAAAALSA CCCCCEEECCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCC >Mature Secondary Structure SSPPAFAPACAAAPVGIFDSGLGGLSVLRAARAHLPDEAFVYVADSRYAPYGERDDAFI CCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHH IERTLAIGEWLAARGAKALVVACNTATAQSIAVVRETLAIPLIGVEPGIKPAALASTSRV HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHH AGVLATAATLRSARFEALIARHAGDCRFLLQPGHGLVQAIERGDTGSAGLRTLLAGYLEP HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHH MLAAGADTLVLGCTHYPFLDATIRELTQNRLTLVDTGEAIARQLARVLDEHGLRSPAGAE HHHCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCC PPPTRLYSTDDGTRLQALAATLLGLDASAETISIPSPRAAAAALSA CCCCCEEECCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA