| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is aroC [H]
Identifier: 238027741
GI number: 238027741
Start: 2350508
End: 2351608
Strand: Reverse
Name: aroC [H]
Synonym: bglu_1g21620
Alternate gene names: 238027741
Gene position: 2351608-2350508 (Counterclockwise)
Preceding gene: 238027742
Following gene: 238027739
Centisome position: 60.2
GC content: 69.94
Gene sequence:
>1101_bases ATGTCCGGCAATACCCTCGGAAAGCTTTTCACTGTCACGACTTTCGGCGAATCGCACGGCCCCGGGATCGGCTGCGTGAT CGACGGCTGCCCGCCGGGCATGGCGCTGACGGAAGCCGACATCCAGCTCGAGCTCGACCGCCGCAAGCCCGGCACGTCGC GCCACGTCACGCAGCGCCAGGAGCCCGATGCGGTCGAGATCCTGTCCGGCGTGTTCGAGGGGCGCACCACCGGTACGCCG ATCGCGCTGTTGATCCGCAACACCGACCAGCGCAGCAAGGACTACGGCAACATCGTCGAGACCTTCCGCCCCGGTCATGC CGACTACACCTACTGGCAGAAGTACGGCATCCGCGACTACCGCGGCGGCGGCCGCTCCTCGGCGCGGCTGACGGCGCCCG TGGTGGGGGCGGGCGCGGTCGCGAAGAAGTGGCTGCGCGAGCGCTTCGGCATCGAGGTGCGCGGCTACATGAGCGCGCTC GGCGAGATCGAGGTGCCGTTCGTCGATTGGGCCCAGGTGCACGAGAACCCGTTCTTCGCGCCGAACGCCGCGATCGTGCC GCAGCTCGAGGCCTATATGGACGCGCTGCGCAAGGACGGCGACTCGATCGGCGCGCGCATCGAGGTGGTGGCCTCGGGCG TGCCGGTGGGGTGGGGCGAGCCGCTCTACGACCGGCTCGACGCCGACATCGCGCACGCGATGATGGCGATCAACGCCGTG AAGGGCGTCGAGATCGGCGCCGGTTTCGCGAGCGTCGCGCAGCGCGGCTCCGAGCACGGCGACGAGCTGACCGAGCAGGG CTTCGTCGGCAATCACGCGGGCGGCATCCTCGGCGGTATCTCGACGGGCCAGGACCTGACCGTGTCGATCGCGATCAAGC CGACCTCGAGCATCCGCACGCCGCGCCGCTCCATTACCAAGACCGGCGACGCCGCCATCGTCGAGACGTTCGGGCGCCAC GATCCCTGCGTCGGCATCCGCGCCACGCCGATCGCCGAATCGATGCTGGCGCTGGTGCTGATCGACCACGCGCTGCGCCA CCGCGCGCAATGCGGCGACGTCGAGACGGCCACGCCGAGGATCGCCGCAAGCGCACCGTGA
Upstream 100 bases:
>100_bases CGGGCGCTCCGGCGCGTGGCGGCACGGCGTTGTCTGCGCGATCGGCGGGGCCGCTGGCATAATGGCGCTTTCCCCGATTT TCTCTCTGGAACGGCTCCTC
Downstream 100 bases:
>100_bases CGCACCGTCATGCGCGCGCCGTCACGGCGGCGCCGGACGTCGCAACGCAAAACGGGCATCGCGCCGGCGCGATGCCCGTT TCTTCGTGCGGCGGCGGTGC
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSGNTLGKLFTVTTFGESHGPGIGCVIDGCPPGMALTEADIQLELDRRKPGTSRHVTQRQEPDAVEILSGVFEGRTTGTP IALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPVVGAGAVAKKWLRERFGIEVRGYMSAL GEIEVPFVDWAQVHENPFFAPNAAIVPQLEAYMDALRKDGDSIGARIEVVASGVPVGWGEPLYDRLDADIAHAMMAINAV KGVEIGAGFASVAQRGSEHGDELTEQGFVGNHAGGILGGISTGQDLTVSIAIKPTSSIRTPRRSITKTGDAAIVETFGRH DPCVGIRATPIAESMLALVLIDHALRHRAQCGDVETATPRIAASAP
Sequences:
>Translated_366_residues MSGNTLGKLFTVTTFGESHGPGIGCVIDGCPPGMALTEADIQLELDRRKPGTSRHVTQRQEPDAVEILSGVFEGRTTGTP IALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPVVGAGAVAKKWLRERFGIEVRGYMSAL GEIEVPFVDWAQVHENPFFAPNAAIVPQLEAYMDALRKDGDSIGARIEVVASGVPVGWGEPLYDRLDADIAHAMMAINAV KGVEIGAGFASVAQRGSEHGDELTEQGFVGNHAGGILGGISTGQDLTVSIAIKPTSSIRTPRRSITKTGDAAIVETFGRH DPCVGIRATPIAESMLALVLIDHALRHRAQCGDVETATPRIAASAP >Mature_365_residues SGNTLGKLFTVTTFGESHGPGIGCVIDGCPPGMALTEADIQLELDRRKPGTSRHVTQRQEPDAVEILSGVFEGRTTGTPI ALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPVVGAGAVAKKWLRERFGIEVRGYMSALG EIEVPFVDWAQVHENPFFAPNAAIVPQLEAYMDALRKDGDSIGARIEVVASGVPVGWGEPLYDRLDADIAHAMMAINAVK GVEIGAGFASVAQRGSEHGDELTEQGFVGNHAGGILGGISTGQDLTVSIAIKPTSSIRTPRRSITKTGDAAIVETFGRHD PCVGIRATPIAESMLALVLIDHALRHRAQCGDVETATPRIAASAP
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788669, Length=360, Percent_Identity=65.5555555555556, Blast_Score=471, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6321290, Length=367, Percent_Identity=41.9618528610354, Blast_Score=292, Evalue=7e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000453 - InterPro: IPR020541 [H]
Pfam domain/function: PF01264 Chorismate_synt [H]
EC number: =4.2.3.5 [H]
Molecular weight: Translated: 39054; Mature: 38922
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNTLGKLFTVTTFGESHGPGIGCVIDGCPPGMALTEADIQLELDRRKPGTSRHVTQRQ CCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCEEEEECCCCCCCCCCCCCCC EPDAVEILSGVFEGRTTGTPIALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDY CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCC RGGGRSSARLTAPVVGAGAVAKKWLRERFGIEVRGYMSALGEIEVPFVDWAQVHENPFFA CCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCC PNAAIVPQLEAYMDALRKDGDSIGARIEVVASGVPVGWGEPLYDRLDADIAHAMMAINAV CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGAGFASVAQRGSEHGDELTEQGFVGNHAGGILGGISTGQDLTVSIAIKPTSSIRT CCCEECCCHHHHHHCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEECCHHCCC PRRSITKTGDAAIVETFGRHDPCVGIRATPIAESMLALVLIDHALRHRAQCGDVETATPR CHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC IAASAP EECCCC >Mature Secondary Structure SGNTLGKLFTVTTFGESHGPGIGCVIDGCPPGMALTEADIQLELDRRKPGTSRHVTQRQ CCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCEEEEECCCCCCCCCCCCCCC EPDAVEILSGVFEGRTTGTPIALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDY CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCC RGGGRSSARLTAPVVGAGAVAKKWLRERFGIEVRGYMSALGEIEVPFVDWAQVHENPFFA CCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCC PNAAIVPQLEAYMDALRKDGDSIGARIEVVASGVPVGWGEPLYDRLDADIAHAMMAINAV CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGAGFASVAQRGSEHGDELTEQGFVGNHAGGILGGISTGQDLTVSIAIKPTSSIRT CCCEECCCHHHHHHCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEEEEECCHHCCC PRRSITKTGDAAIVETFGRHDPCVGIRATPIAESMLALVLIDHALRHRAQCGDVETATPR CHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC IAASAP EECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA