Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is pheT [H]

Identifier: 238027726

GI number: 238027726

Start: 2334033

End: 2336462

Strand: Reverse

Name: pheT [H]

Synonym: bglu_1g21470

Alternate gene names: 238027726

Gene position: 2336462-2334033 (Counterclockwise)

Preceding gene: 238027727

Following gene: 238027725

Centisome position: 59.81

GC content: 68.07

Gene sequence:

>2430_bases
ATGCAATTCCCTGAATCCTGGTTGAGAACCTTTGTCGATCCGCAGCTGACGACTGACGAGCTGTCGCATGCGCTGACGAT
GGCCGGGCTCGAAGTCGAGTCGCTGCGTCCGGCCGCGCCGCCGACCTCGCGCATCGTCGTCGGCCGCGTGCTCGAAGTGG
TGAAGCATCCGGACGCGGACAAGCTGAACGTCTGCCAGGTCGATGCCGGCACGGGCGCGACGCTGAACATCGTCTGCGGG
GCGCCGAACGTTGCGCCGGGCATCAAGGTGCCGGTCGCGCTGGTCGGCGCGGAACTGCCGCCCGCCGAGGAGGGCGGCGA
GCCGTTCCGGATTCGGCTGTCGAAGCTGCGCGGCGTCGAGAGCCAGGGCATGCTCTGCTCGGCGCGCGAGCTGAAGCTGT
CCGACGATCACAGCGGCCTGATGATCCTGCCCGAGGACACGCCGATCGGCCGCGACATCCGCGAGGTGCTGAACCTCGAC
GACACGATCTTCGAAATCAAGCTGACGCCGAACAAGGCCGACTGCCTGTCGGTATACGGCATCGCGCGCGAAACCGCCGC
GATCACGGGCGCGCCGCTGAAGGCCGTCGCGTTCGCGCCGGTGGCCACCGAGCTGGACGAAACGCTGCCGGTGCGCATTT
CCGCGCCGGATCTGTGCGGCCGCTTCTCGGGCCGCGTAATCCGCGGCGTGAACGCACGCGCGAAGACGCCGCAATGGATG
GTCGAGCGCCTCGAGCGCTCGGGGCAGCGCAGCGTGTCGGCGCTGGTCGACATCTCGAACTATGTGATGTTCGAACTCGG
CCGCCCGTCGCACGTGTTCGACCTCGACAAGATCCACGGCGCGATCGACGTGCGCTGGGGCCGGCGCGGCGAGACGCTGA
AGCTGCTGAACGGCAACACGGTCGAACTCGACGAGACGGTCGGCGTGATTGCCGATGAAGGGCAGGTGGAGAGCCTTGCG
GGCATCATGGGCGGCGACAGCACGGCCGTCACGCTCGACACCACCAACATCTATCTCGAAGCGGCGTTCTGGTGGCCGGA
CAGCATCCGCGGCCGCTCGCGCAAGTACAACTTCTCGACCGACGCGGGCCACCGCTTCGAGCGCGGCGTCGATTATTCGA
CGACGGTCGAGCATCTCGAGCGCATCACGCAGCTGATCCTCGAGATCTGCGGCGGCCAGGCCGGGCCGGTCGACGACCAG
GCGGTGAACCTGCCGACGCGCGCGCCGGTCGCGATGCGCGTGGCGCGCGCGAACCGCATCATCGGCGTAGCGATCGGCGC
CGACGAGATCGCCGCCATCTTCACGCGGCTCGGCCTGAGCTTCGAGCGCGACGGCGACACCTTCCTGGTCACGCCGCCGC
CGCACCGCTTCGACATCGAGATCGAGGAAGACCTGATCGAGGAAGTCGCGCGCATCCACGGCTTCGAGAAGATCCCGGCG
CGCCCGCCGGTGGCGACCAGCGAAATGCGCGCGACCAACGAGACGCAGCGCTCGATCCATACCATCCGCCATGCGCTCGC
CGCGCGCGATTACGCCGAGACGGTCAACTTCAGCTTCGTCGACGCCGACTGGGAACGCGACTTCGCCGGCAATACCCGCC
CGGTGCGTCTGCTCAACCCGATCGCGAGCCAGCTGTCGGTGATGCGCACCACGCTGTTCGGCAGCCTCGTCAACGTGCTG
CGTCACAACCTGAACCGCCGCGCGGACCGCGTGCGCGCGTTCGAGACCGGCCGCGTGTTCCTGGCCGATCCCACCGTCGC
GGCGGGCGAGCTGACGGTCGAGGGTTACGCGCAGCCGAAGCGGGTCGGCGCGCTCGCATATGGCCCGCTGCTCGAGGAGC
AGTGGGGTGCGCCCACGCGCCAGGTCGATTTCTTCGACGTGAAGGGCGACCTGGAAGCGCTGCTCGCGCCGGCGGTGGCT
CGTTTCGTGAAGGCCGAGCACCCGGCGCTGCATCCGGGCCGCAGCGCCCGCATCGAACTCGACGGCCGCGCGGTCGGCTG
GATCGGCGAACTGCACCCGCGCCTGATGCAGCAGTACGAGCTGCCGCACGCGCCGGTGATGTTCGAGATCGATGCCGACG
CGCTGATCGCACGCGCGCTGCCGGTGCCGACCGACGTGTCGAAATTCCCGCCGGTGCGTCGTGATATCGCGGTGGTCGTC
GATCAGGGCGTCGAGGCGCAGACGCTGTTCGACGCCATGCAGGGCGCGCTGGCCGACGAGGCATGCAAGTTCGTCCAGAA
GATTGTACTCTTTGACGAATTTCGTGCAAAATCAAATACTTCCGGCGGCCTTGCGATGCACGAGAAAAGCCTGGCGTTCC
GCGTCGTCCTGCAGGATGACGCCGGCACGCTGCAGGACGAAGTGGTCGAGCGCGCGATCCGGGCCCTCGTTGACAGCCTG
CGTGGACACGGTGCGCGGTTGCGCGGCTGA

Upstream 100 bases:

>100_bases
GCTTCCTGCGCCAGTTCGCCTGACCCGCGGCGCGCCCATGGGCGGGCGCAGTGCCGCGCGCGCCGGGTATCGATCTAACC
TGTTTCGAACGTAGACACTC

Downstream 100 bases:

>100_bases
CACCACGCGAAGCTGGCCGGAACGCATCGGGTTCCGGCCTGTTTGTCCAGGGATAATGCGCAAGTTTTGCAGATATGAAC
GACATGAACTCGAGTGAATT

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 809; Mature: 809

Protein sequence:

>809_residues
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLRPAAPPTSRIVVGRVLEVVKHPDADKLNVCQVDAGTGATLNIVCG
APNVAPGIKVPVALVGAELPPAEEGGEPFRIRLSKLRGVESQGMLCSARELKLSDDHSGLMILPEDTPIGRDIREVLNLD
DTIFEIKLTPNKADCLSVYGIARETAAITGAPLKAVAFAPVATELDETLPVRISAPDLCGRFSGRVIRGVNARAKTPQWM
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGAIDVRWGRRGETLKLLNGNTVELDETVGVIADEGQVESLA
GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRSRKYNFSTDAGHRFERGVDYSTTVEHLERITQLILEICGGQAGPVDDQ
AVNLPTRAPVAMRVARANRIIGVAIGADEIAAIFTRLGLSFERDGDTFLVTPPPHRFDIEIEEDLIEEVARIHGFEKIPA
RPPVATSEMRATNETQRSIHTIRHALAARDYAETVNFSFVDADWERDFAGNTRPVRLLNPIASQLSVMRTTLFGSLVNVL
RHNLNRRADRVRAFETGRVFLADPTVAAGELTVEGYAQPKRVGALAYGPLLEEQWGAPTRQVDFFDVKGDLEALLAPAVA
RFVKAEHPALHPGRSARIELDGRAVGWIGELHPRLMQQYELPHAPVMFEIDADALIARALPVPTDVSKFPPVRRDIAVVV
DQGVEAQTLFDAMQGALADEACKFVQKIVLFDEFRAKSNTSGGLAMHEKSLAFRVVLQDDAGTLQDEVVERAIRALVDSL
RGHGARLRG

Sequences:

>Translated_809_residues
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLRPAAPPTSRIVVGRVLEVVKHPDADKLNVCQVDAGTGATLNIVCG
APNVAPGIKVPVALVGAELPPAEEGGEPFRIRLSKLRGVESQGMLCSARELKLSDDHSGLMILPEDTPIGRDIREVLNLD
DTIFEIKLTPNKADCLSVYGIARETAAITGAPLKAVAFAPVATELDETLPVRISAPDLCGRFSGRVIRGVNARAKTPQWM
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGAIDVRWGRRGETLKLLNGNTVELDETVGVIADEGQVESLA
GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRSRKYNFSTDAGHRFERGVDYSTTVEHLERITQLILEICGGQAGPVDDQ
AVNLPTRAPVAMRVARANRIIGVAIGADEIAAIFTRLGLSFERDGDTFLVTPPPHRFDIEIEEDLIEEVARIHGFEKIPA
RPPVATSEMRATNETQRSIHTIRHALAARDYAETVNFSFVDADWERDFAGNTRPVRLLNPIASQLSVMRTTLFGSLVNVL
RHNLNRRADRVRAFETGRVFLADPTVAAGELTVEGYAQPKRVGALAYGPLLEEQWGAPTRQVDFFDVKGDLEALLAPAVA
RFVKAEHPALHPGRSARIELDGRAVGWIGELHPRLMQQYELPHAPVMFEIDADALIARALPVPTDVSKFPPVRRDIAVVV
DQGVEAQTLFDAMQGALADEACKFVQKIVLFDEFRAKSNTSGGLAMHEKSLAFRVVLQDDAGTLQDEVVERAIRALVDSL
RGHGARLRG
>Mature_809_residues
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLRPAAPPTSRIVVGRVLEVVKHPDADKLNVCQVDAGTGATLNIVCG
APNVAPGIKVPVALVGAELPPAEEGGEPFRIRLSKLRGVESQGMLCSARELKLSDDHSGLMILPEDTPIGRDIREVLNLD
DTIFEIKLTPNKADCLSVYGIARETAAITGAPLKAVAFAPVATELDETLPVRISAPDLCGRFSGRVIRGVNARAKTPQWM
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGAIDVRWGRRGETLKLLNGNTVELDETVGVIADEGQVESLA
GIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRSRKYNFSTDAGHRFERGVDYSTTVEHLERITQLILEICGGQAGPVDDQ
AVNLPTRAPVAMRVARANRIIGVAIGADEIAAIFTRLGLSFERDGDTFLVTPPPHRFDIEIEEDLIEEVARIHGFEKIPA
RPPVATSEMRATNETQRSIHTIRHALAARDYAETVNFSFVDADWERDFAGNTRPVRLLNPIASQLSVMRTTLFGSLVNVL
RHNLNRRADRVRAFETGRVFLADPTVAAGELTVEGYAQPKRVGALAYGPLLEEQWGAPTRQVDFFDVKGDLEALLAPAVA
RFVKAEHPALHPGRSARIELDGRAVGWIGELHPRLMQQYELPHAPVMFEIDADALIARALPVPTDVSKFPPVRRDIAVVV
DQGVEAQTLFDAMQGALADEACKFVQKIVLFDEFRAKSNTSGGLAMHEKSLAFRVVLQDDAGTLQDEVVERAIRALVDSL
RGHGARLRG

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI124028525, Length=408, Percent_Identity=25.7352941176471, Blast_Score=87, Evalue=6e-17,
Organism=Escherichia coli, GI1788006, Length=807, Percent_Identity=41.0161090458488, Blast_Score=606, Evalue=1e-174,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 88543; Mature: 88543

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLRPAAPPTSRIVVGRVLEVVKHPDAD
CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEEGGEPFRIRLSKLRGVE
CCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHEECCCCCCCCCCCCCEEEEEHHHCCCC
SQGMLCSARELKLSDDHSGLMILPEDTPIGRDIREVLNLDDTIFEIKLTPNKADCLSVYG
CCCCEEECCCCEECCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHH
IARETAAITGAPLKAVAFAPVATELDETLPVRISAPDLCGRFSGRVIRGVNARAKTPQWM
HHHHHHHCCCCCHHHEEECHHHHHCCCCCCEEECCHHHHHHCCCCEEECCCCCCCCHHHH
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGAIDVRWGRRGETLKLLNGNT
HHHHHHCCHHHHHHHHHHCCEEEEEECCCCCEEEHHHHCCEEEEEECCCCCEEEEECCCE
VELDETVGVIADEGQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRSRKYNFST
EEECCCCEEEECCCCHHHHHHHCCCCCEEEEEEECEEEEEEEEECCCCCCCCCCEECCCC
DAGHRFERGVDYSTTVEHLERITQLILEICGGQAGPVDDQAVNLPTRAPVAMRVARANRI
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCE
IGVAIGADEIAAIFTRLGLSFERDGDTFLVTPPPHRFDIEIEEDLIEEVARIHGFEKIPA
EEEEECHHHHHHHHHHHCCCEECCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCC
RPPVATSEMRATNETQRSIHTIRHALAARDYAETVNFSFVDADWERDFAGNTRPVRLLNP
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH
IASQLSVMRTTLFGSLVNVLRHNLNRRADRVRAFETGRVFLADPTVAAGELTVEGYAQPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCEECCEEEEECCCCCH
RVGALAYGPLLEEQWGAPTRQVDFFDVKGDLEALLAPAVARFVKAEHPALHPGRSARIEL
HHCEEHHCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
DGRAVGWIGELHPRLMQQYELPHAPVMFEIDADALIARALPVPTDVSKFPPVRRDIAVVV
CCCEEECHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCHHHCCCCHHCCEEEE
DQGVEAQTLFDAMQGALADEACKFVQKIVLFDEFRAKSNTSGGLAMHEKSLAFRVVLQDD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEEECC
AGTLQDEVVERAIRALVDSLRGHGARLRG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLRPAAPPTSRIVVGRVLEVVKHPDAD
CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEEGGEPFRIRLSKLRGVE
CCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHEECCCCCCCCCCCCCEEEEEHHHCCCC
SQGMLCSARELKLSDDHSGLMILPEDTPIGRDIREVLNLDDTIFEIKLTPNKADCLSVYG
CCCCEEECCCCEECCCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHH
IARETAAITGAPLKAVAFAPVATELDETLPVRISAPDLCGRFSGRVIRGVNARAKTPQWM
HHHHHHHCCCCCHHHEEECHHHHHCCCCCCEEECCHHHHHHCCCCEEECCCCCCCCHHHH
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGAIDVRWGRRGETLKLLNGNT
HHHHHHCCHHHHHHHHHHCCEEEEEECCCCCEEEHHHHCCEEEEEECCCCCEEEEECCCE
VELDETVGVIADEGQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRSRKYNFST
EEECCCCEEEECCCCHHHHHHHCCCCCEEEEEEECEEEEEEEEECCCCCCCCCCEECCCC
DAGHRFERGVDYSTTVEHLERITQLILEICGGQAGPVDDQAVNLPTRAPVAMRVARANRI
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCE
IGVAIGADEIAAIFTRLGLSFERDGDTFLVTPPPHRFDIEIEEDLIEEVARIHGFEKIPA
EEEEECHHHHHHHHHHHCCCEECCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCC
RPPVATSEMRATNETQRSIHTIRHALAARDYAETVNFSFVDADWERDFAGNTRPVRLLNP
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH
IASQLSVMRTTLFGSLVNVLRHNLNRRADRVRAFETGRVFLADPTVAAGELTVEGYAQPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCEECCEEEEECCCCCH
RVGALAYGPLLEEQWGAPTRQVDFFDVKGDLEALLAPAVARFVKAEHPALHPGRSARIEL
HHCEEHHCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
DGRAVGWIGELHPRLMQQYELPHAPVMFEIDADALIARALPVPTDVSKFPPVRRDIAVVV
CCCEEECHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCHHHCCCCHHCCEEEE
DQGVEAQTLFDAMQGALADEACKFVQKIVLFDEFRAKSNTSGGLAMHEKSLAFRVVLQDD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEEECC
AGTLQDEVVERAIRALVDSLRGHGARLRG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA