| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yfcF [H]
Identifier: 238027712
GI number: 238027712
Start: 2319698
End: 2320333
Strand: Reverse
Name: yfcF [H]
Synonym: bglu_1g21330
Alternate gene names: 238027712
Gene position: 2320333-2319698 (Counterclockwise)
Preceding gene: 238027713
Following gene: 238027673
Centisome position: 59.4
GC content: 66.51
Gene sequence:
>636_bases ATGAGCCAGAAACCGATCACGCTGTATGTCGGCGCCGACTATGTCAGCGCCTTCGCGATGTCCGCCTTCGTCGTGCTGAA GGAAAAAGGTCTCGACTTCGAGATTCGCACCGTCGATCTGAAGAGCAAGCAGCAACACGGCTCGGCCTATCGAGAGGTGT CGCTGACGCGCCGCGTGCCGACCCTGCAGCACGACCGCTTCACGCTGTCGGAATCGTCGGCGATCGCCGAGTATCTCGAC GAGGTCTATCCGGCGCCGCACTACGCGGCCGTCCTGCCGGCCGACCGCGAGACGCGCGCGCTCGCTCGGCAGCTACAGGC GTGGATCCGCAGCGACTTCATGCCGCTCAAGAGCGAGCGGCAGGCCGACCGGATCTATTTTCCGGAGCCGGTGAAGCCGC TGGGCGAGGCGGCGCAGCTGGCGTGCGAGAAGCTGCTGTCGGCGGCCGATCGACTGATCGACGACGAGCGCTACGGCGTG TTCGGCGACTGGTGCATCGCCGACACCGATTTCGCGCTGATGCTGAACCGGCTGGTGGCGTGCGGCGACCCGGTGCCGCC GAAGGTGCTGCGCTACGTCGAGCGGCAGTGGGCGAGGCCGAGCGTGCAGCAGTGGGTGAAGCAGAAGCGCGACTGA
Upstream 100 bases:
>100_bases AGGTGCCGCCGGAACACGCGTCAATCGATTCCAAGACGCTTCAATCATTCATTCAGAACGTCGGCCGGCCCGTGCCGGCC GACACAGATCAGGAAACACC
Downstream 100 bases:
>100_bases GGCGGGGCAGGGCGGCGCGGCTCAGTGCCCCTTGGGGGACACCGCGCCGGTGCGCGCCTGGTTAGCGTTGCGCGCGAACC AGGCGCGCACCCGAGCCATC
Product: glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSQKPITLYVGADYVSAFAMSAFVVLKEKGLDFEIRTVDLKSKQQHGSAYREVSLTRRVPTLQHDRFTLSESSAIAEYLD EVYPAPHYAAVLPADRETRALARQLQAWIRSDFMPLKSERQADRIYFPEPVKPLGEAAQLACEKLLSAADRLIDDERYGV FGDWCIADTDFALMLNRLVACGDPVPPKVLRYVERQWARPSVQQWVKQKRD
Sequences:
>Translated_211_residues MSQKPITLYVGADYVSAFAMSAFVVLKEKGLDFEIRTVDLKSKQQHGSAYREVSLTRRVPTLQHDRFTLSESSAIAEYLD EVYPAPHYAAVLPADRETRALARQLQAWIRSDFMPLKSERQADRIYFPEPVKPLGEAAQLACEKLLSAADRLIDDERYGV FGDWCIADTDFALMLNRLVACGDPVPPKVLRYVERQWARPSVQQWVKQKRD >Mature_210_residues SQKPITLYVGADYVSAFAMSAFVVLKEKGLDFEIRTVDLKSKQQHGSAYREVSLTRRVPTLQHDRFTLSESSAIAEYLDE VYPAPHYAAVLPADRETRALARQLQAWIRSDFMPLKSERQADRIYFPEPVKPLGEAAQLACEKLLSAADRLIDDERYGVF GDWCIADTDFALMLNRLVACGDPVPPKVLRYVERQWARPSVQQWVKQKRD
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788639, Length=206, Percent_Identity=46.1165048543689, Blast_Score=188, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 24109; Mature: 23978
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKPITLYVGADYVSAFAMSAFVVLKEKGLDFEIRTVDLKSKQQHGSAYREVSLTRRVP CCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHHHCCC TLQHDRFTLSESSAIAEYLDEVYPAPHYAAVLPADRETRALARQLQAWIRSDFMPLKSER CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC QADRIYFPEPVKPLGEAAQLACEKLLSAADRLIDDERYGVFGDWCIADTDFALMLNRLVA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHH CGDPVPPKVLRYVERQWARPSVQQWVKQKRD CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure SQKPITLYVGADYVSAFAMSAFVVLKEKGLDFEIRTVDLKSKQQHGSAYREVSLTRRVP CCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHHHCCC TLQHDRFTLSESSAIAEYLDEVYPAPHYAAVLPADRETRALARQLQAWIRSDFMPLKSER CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC QADRIYFPEPVKPLGEAAQLACEKLLSAADRLIDDERYGVFGDWCIADTDFALMLNRLVA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHH CGDPVPPKVLRYVERQWARPSVQQWVKQKRD CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]