Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yfcF [H]

Identifier: 238027712

GI number: 238027712

Start: 2319698

End: 2320333

Strand: Reverse

Name: yfcF [H]

Synonym: bglu_1g21330

Alternate gene names: 238027712

Gene position: 2320333-2319698 (Counterclockwise)

Preceding gene: 238027713

Following gene: 238027673

Centisome position: 59.4

GC content: 66.51

Gene sequence:

>636_bases
ATGAGCCAGAAACCGATCACGCTGTATGTCGGCGCCGACTATGTCAGCGCCTTCGCGATGTCCGCCTTCGTCGTGCTGAA
GGAAAAAGGTCTCGACTTCGAGATTCGCACCGTCGATCTGAAGAGCAAGCAGCAACACGGCTCGGCCTATCGAGAGGTGT
CGCTGACGCGCCGCGTGCCGACCCTGCAGCACGACCGCTTCACGCTGTCGGAATCGTCGGCGATCGCCGAGTATCTCGAC
GAGGTCTATCCGGCGCCGCACTACGCGGCCGTCCTGCCGGCCGACCGCGAGACGCGCGCGCTCGCTCGGCAGCTACAGGC
GTGGATCCGCAGCGACTTCATGCCGCTCAAGAGCGAGCGGCAGGCCGACCGGATCTATTTTCCGGAGCCGGTGAAGCCGC
TGGGCGAGGCGGCGCAGCTGGCGTGCGAGAAGCTGCTGTCGGCGGCCGATCGACTGATCGACGACGAGCGCTACGGCGTG
TTCGGCGACTGGTGCATCGCCGACACCGATTTCGCGCTGATGCTGAACCGGCTGGTGGCGTGCGGCGACCCGGTGCCGCC
GAAGGTGCTGCGCTACGTCGAGCGGCAGTGGGCGAGGCCGAGCGTGCAGCAGTGGGTGAAGCAGAAGCGCGACTGA

Upstream 100 bases:

>100_bases
AGGTGCCGCCGGAACACGCGTCAATCGATTCCAAGACGCTTCAATCATTCATTCAGAACGTCGGCCGGCCCGTGCCGGCC
GACACAGATCAGGAAACACC

Downstream 100 bases:

>100_bases
GGCGGGGCAGGGCGGCGCGGCTCAGTGCCCCTTGGGGGACACCGCGCCGGTGCGCGCCTGGTTAGCGTTGCGCGCGAACC
AGGCGCGCACCCGAGCCATC

Product: glutathione S-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSQKPITLYVGADYVSAFAMSAFVVLKEKGLDFEIRTVDLKSKQQHGSAYREVSLTRRVPTLQHDRFTLSESSAIAEYLD
EVYPAPHYAAVLPADRETRALARQLQAWIRSDFMPLKSERQADRIYFPEPVKPLGEAAQLACEKLLSAADRLIDDERYGV
FGDWCIADTDFALMLNRLVACGDPVPPKVLRYVERQWARPSVQQWVKQKRD

Sequences:

>Translated_211_residues
MSQKPITLYVGADYVSAFAMSAFVVLKEKGLDFEIRTVDLKSKQQHGSAYREVSLTRRVPTLQHDRFTLSESSAIAEYLD
EVYPAPHYAAVLPADRETRALARQLQAWIRSDFMPLKSERQADRIYFPEPVKPLGEAAQLACEKLLSAADRLIDDERYGV
FGDWCIADTDFALMLNRLVACGDPVPPKVLRYVERQWARPSVQQWVKQKRD
>Mature_210_residues
SQKPITLYVGADYVSAFAMSAFVVLKEKGLDFEIRTVDLKSKQQHGSAYREVSLTRRVPTLQHDRFTLSESSAIAEYLDE
VYPAPHYAAVLPADRETRALARQLQAWIRSDFMPLKSERQADRIYFPEPVKPLGEAAQLACEKLLSAADRLIDDERYGVF
GDWCIADTDFALMLNRLVACGDPVPPKVLRYVERQWARPSVQQWVKQKRD

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788639, Length=206, Percent_Identity=46.1165048543689, Blast_Score=188, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 24109; Mature: 23978

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKPITLYVGADYVSAFAMSAFVVLKEKGLDFEIRTVDLKSKQQHGSAYREVSLTRRVP
CCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHHHCCC
TLQHDRFTLSESSAIAEYLDEVYPAPHYAAVLPADRETRALARQLQAWIRSDFMPLKSER
CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
QADRIYFPEPVKPLGEAAQLACEKLLSAADRLIDDERYGVFGDWCIADTDFALMLNRLVA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHH
CGDPVPPKVLRYVERQWARPSVQQWVKQKRD
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SQKPITLYVGADYVSAFAMSAFVVLKEKGLDFEIRTVDLKSKQQHGSAYREVSLTRRVP
CCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCHHHHHHHHHHCCC
TLQHDRFTLSESSAIAEYLDEVYPAPHYAAVLPADRETRALARQLQAWIRSDFMPLKSER
CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
QADRIYFPEPVKPLGEAAQLACEKLLSAADRLIDDERYGVFGDWCIADTDFALMLNRLVA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHH
CGDPVPPKVLRYVERQWARPSVQQWVKQKRD
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]