| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027641
Identifier: 238027641
GI number: 238027641
Start: 2253475
End: 2253711
Strand: Reverse
Name: 238027641
Synonym: bglu_1g20620
Alternate gene names: NA
Gene position: 2253711-2253475 (Counterclockwise)
Preceding gene: 238027643
Following gene: 238027640
Centisome position: 57.69
GC content: 63.29
Gene sequence:
>237_bases ATGAACAACATCCGCCACCTTCGCAAGAGTCTCAGCCTCTCCCAGGCCGAAATGGCCGAGCAGATTGGCGTGACTCAATC CGCCCTGTCCCAGTACGAACGGCAGCTTTGCGATCCGGTTATCGAAACCGCGCGGCGAATGATCGTGTACGCCGGCTCGC TGGGCGCGACCTGGACGCTGGACCAGATCTACTCCGATCCGCCCTTGGCCGAGCCGGCCCAGGCCGAAGGGGGATGA
Upstream 100 bases:
>100_bases GTAGCCATGCGGCAATCATAAAAAGGGCTACTAATATCCGCTGGCCGACAGCATTAGAACTTCTCTTGACCATGAAAAGA AGAAGTTCTAATATTCGGCC
Downstream 100 bases:
>100_bases GATGAAGCATTGGTTTGCGCGGCGTGTTGCCGACTTCATCGACTTGCGGCTGCACTGGTCTGTGCGGTTTGCCGCCGAGT ACGAGGGGAAGGCGCCGTGT
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MNNIRHLRKSLSLSQAEMAEQIGVTQSALSQYERQLCDPVIETARRMIVYAGSLGATWTLDQIYSDPPLAEPAQAEGG
Sequences:
>Translated_78_residues MNNIRHLRKSLSLSQAEMAEQIGVTQSALSQYERQLCDPVIETARRMIVYAGSLGATWTLDQIYSDPPLAEPAQAEGG >Mature_78_residues MNNIRHLRKSLSLSQAEMAEQIGVTQSALSQYERQLCDPVIETARRMIVYAGSLGATWTLDQIYSDPPLAEPAQAEGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8578; Mature: 8578
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIRHLRKSLSLSQAEMAEQIGVTQSALSQYERQLCDPVIETARRMIVYAGSLGATWTL CCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEH DQIYSDPPLAEPAQAEGG HHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNNIRHLRKSLSLSQAEMAEQIGVTQSALSQYERQLCDPVIETARRMIVYAGSLGATWTL CCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEH DQIYSDPPLAEPAQAEGG HHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA