| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027629
Identifier: 238027629
GI number: 238027629
Start: 2241457
End: 2241984
Strand: Reverse
Name: 238027629
Synonym: bglu_1g20500
Alternate gene names: NA
Gene position: 2241984-2241457 (Counterclockwise)
Preceding gene: 238027631
Following gene: 238027628
Centisome position: 57.39
GC content: 64.96
Gene sequence:
>528_bases ATGGCAGTAAAGAGCGTCGACTGGCTCGCGATAGAGGGTGCGTACCTAGCCGGCGTGGATTCGGTGCGCACCATCGCGAG TGCGCACGGTATCTCGGAAGCCATGATCCGCAAGAAGGCCAAGCAGCTTGGCTGGAGCCGTGATCCGGGCGGCACGAAGC GCGCCATGGTCAATGCGCACATGGCTGGCGGTACGCAGGGGAGTTCGCAGGAGGGTGCGCAGATCGCGCACGAGCAGATC GCCACCGCAGCGACTGCCGACATCCAGGACATGGAGCGCGGGCTGGCCGTGCACCGCGCCTGCCTGGTACGGCTTGAAGT CGCGGTCAAGAATGTGGCCGACCCGAAGATCATCAAGACGATCACCGAGGCGGCATCCCTCGCCATCAGCGGCATCCGAA AGATTCGGGGCCTCGACACCCCGAACCCAGCAGATGCAGCCGACCTCGACGCCGCCATCGAAGCCGAACTGGCGTACCTG GAGCGCAGCCGACAAGCTGGCACTGCTCCAGACGCTGAAGGCGCGTAA
Upstream 100 bases:
>100_bases GTGGTTAAGGGCGGCATCCTGTCGAATGCCGACTACGAAGATAGCGGCTCCGCTCATCGAATCAATAATGGGTAAACCCT TGGAAGTCAGGGAGTAAGAG
Downstream 100 bases:
>100_bases CCGGCTGAGCTGGAAGCCGCTGCCCGGGCCGCAGTCGCAGGCCTACGCCTGCCGGGCGGACGTGATCCTGTACGGCGGCG CGGCTGGAGGCGGGAAGACC
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MAVKSVDWLAIEGAYLAGVDSVRTIASAHGISEAMIRKKAKQLGWSRDPGGTKRAMVNAHMAGGTQGSSQEGAQIAHEQI ATAATADIQDMERGLAVHRACLVRLEVAVKNVADPKIIKTITEAASLAISGIRKIRGLDTPNPADAADLDAAIEAELAYL ERSRQAGTAPDAEGA
Sequences:
>Translated_175_residues MAVKSVDWLAIEGAYLAGVDSVRTIASAHGISEAMIRKKAKQLGWSRDPGGTKRAMVNAHMAGGTQGSSQEGAQIAHEQI ATAATADIQDMERGLAVHRACLVRLEVAVKNVADPKIIKTITEAASLAISGIRKIRGLDTPNPADAADLDAAIEAELAYL ERSRQAGTAPDAEGA >Mature_174_residues AVKSVDWLAIEGAYLAGVDSVRTIASAHGISEAMIRKKAKQLGWSRDPGGTKRAMVNAHMAGGTQGSSQEGAQIAHEQIA TAATADIQDMERGLAVHRACLVRLEVAVKNVADPKIIKTITEAASLAISGIRKIRGLDTPNPADAADLDAAIEAELAYLE RSRQAGTAPDAEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18252; Mature: 18121
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKSVDWLAIEGAYLAGVDSVRTIASAHGISEAMIRKKAKQLGWSRDPGGTKRAMVNAH CCCCCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH MAGGTQGSSQEGAQIAHEQIATAATADIQDMERGLAVHRACLVRLEVAVKNVADPKIIKT HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ITEAASLAISGIRKIRGLDTPNPADAADLDAAIEAELAYLERSRQAGTAPDAEGA HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AVKSVDWLAIEGAYLAGVDSVRTIASAHGISEAMIRKKAKQLGWSRDPGGTKRAMVNAH CCCCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH MAGGTQGSSQEGAQIAHEQIATAATADIQDMERGLAVHRACLVRLEVAVKNVADPKIIKT HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ITEAASLAISGIRKIRGLDTPNPADAADLDAAIEAELAYLERSRQAGTAPDAEGA HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA