| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027627
Identifier: 238027627
GI number: 238027627
Start: 2238622
End: 2239806
Strand: Reverse
Name: 238027627
Synonym: bglu_1g20480
Alternate gene names: NA
Gene position: 2239806-2238622 (Counterclockwise)
Preceding gene: 238027628
Following gene: 238027626
Centisome position: 57.34
GC content: 65.23
Gene sequence:
>1185_bases TTGCGCGATGCCCGGCCGCTGATCAAGCCGGTGCCGGCGAACCTCCGGTACTTCTCGAAGACCCCGTACGCCTCGCGCGC GATCCAGATCTACACGCGCTCGATCACCTCGCTGGAATGGGCGGTCAAGGTGAAGAAGGACGTCGCCGAGAACAGCGAGA TCAAGCGCCAGCTCGAGGTGACGTCCGCCTGCCTGTTCAGCCCGAACAACCAGGACACGTTCACGACGCTGCTGCAGGCG GTGATCGAGGACCTATGCGTGTGCGGCGCCGGCGCGATCGAGCCCGAGCTGGGCGGCGACAAGCTGCGTCCGCTCTGGAT GTGGCCGGTCGACGCGCTCTCGATCCAGATCTACGCCGACTGGGACGGGGACGAGGCGAAGCCCCGGTACTGCCAGACCT ACGGCTACGGGAATGTCGGCGTGGCGCAGGGCGTCAACCTGCTGAACCGGGAGCTGGTGTACATCCGGGACCGGGTGACG ACCGATTCGCCGTTCTCCTTCGGCATGCTGGAGATCGCCTTCGAGTCGATCAATCGGCTGCTGGGCGTGGCGGAGTACGC CGGCGACATCGCGGCCAACGCCCACCCGGAGAACCTGATCTTCCTGCAGGAGGCCTCGCAGGAAACCATCGAAGCCTTCC GCGGCTACTGGCGGAACGAAATCGAAGGGCAGGGCCAGGTGCCGATCATCGGCGGCAAGGACGCGAAGGTACTGAATCTC CGTGGCGCAAGCGACGAGGCGTTGTACCTGAAGTACCAGGAGTTCGTCATCCGCGAGATCGCGGTGGCCTTCGGCATCAG CGCCCAGAACCTCGGGGTGGAGCAGAACATCAACCGGAACAACGGTGAGGTGGCCGAAGACCGCGACTGGGATCTGTCCA TCAAGCCGATGGCGCGCGCGATCGCCTCGTACCTCAATCGCGAGGTGATCTGGGGGCTGCTCGGCCACACGCAGATCGAG CTGACGCCCGGCGGCCTCGACCGCGAGGACGAGAAGGCCACGGCCGACATCTACACGCTCGAATACAAGGGCAACGCGAT CACCCCGAACGAGTACCGCGCCCGCCGCAACATGCCGCCGCTGAAGAGCAAGTTCGGCGACATGGTCTTTGCCGACGCCC AGATCGCCATCGAGGCGGCGCGGGGCGCCAAGCAGGTCAATCCTGAGCTGACCAACATCGAGTAG
Upstream 100 bases:
>100_bases GTGCGGGCGATCCGCGCCGGGCGCGTGGGGGCGCCCGAAGCACGAGCCGCAGCGGCGGACCTCGGCATTCGCGCGCCTGC GGCAGACCGGCTCATGGGGC
Downstream 100 bases:
>100_bases CAGGCCGAACGCCTGCACCCCGCCGCAAGGCAACCCCTCGGGCGTTCGCCCTCACAGGAGCATTCATGGGCCTTCCCATC CATACCGTCGAAGTCTTGCC
Product: putative bacteriophage portal protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MRDARPLIKPVPANLRYFSKTPYASRAIQIYTRSITSLEWAVKVKKDVAENSEIKRQLEVTSACLFSPNNQDTFTTLLQA VIEDLCVCGAGAIEPELGGDKLRPLWMWPVDALSIQIYADWDGDEAKPRYCQTYGYGNVGVAQGVNLLNRELVYIRDRVT TDSPFSFGMLEIAFESINRLLGVAEYAGDIAANAHPENLIFLQEASQETIEAFRGYWRNEIEGQGQVPIIGGKDAKVLNL RGASDEALYLKYQEFVIREIAVAFGISAQNLGVEQNINRNNGEVAEDRDWDLSIKPMARAIASYLNREVIWGLLGHTQIE LTPGGLDREDEKATADIYTLEYKGNAITPNEYRARRNMPPLKSKFGDMVFADAQIAIEAARGAKQVNPELTNIE
Sequences:
>Translated_394_residues MRDARPLIKPVPANLRYFSKTPYASRAIQIYTRSITSLEWAVKVKKDVAENSEIKRQLEVTSACLFSPNNQDTFTTLLQA VIEDLCVCGAGAIEPELGGDKLRPLWMWPVDALSIQIYADWDGDEAKPRYCQTYGYGNVGVAQGVNLLNRELVYIRDRVT TDSPFSFGMLEIAFESINRLLGVAEYAGDIAANAHPENLIFLQEASQETIEAFRGYWRNEIEGQGQVPIIGGKDAKVLNL RGASDEALYLKYQEFVIREIAVAFGISAQNLGVEQNINRNNGEVAEDRDWDLSIKPMARAIASYLNREVIWGLLGHTQIE LTPGGLDREDEKATADIYTLEYKGNAITPNEYRARRNMPPLKSKFGDMVFADAQIAIEAARGAKQVNPELTNIE >Mature_394_residues MRDARPLIKPVPANLRYFSKTPYASRAIQIYTRSITSLEWAVKVKKDVAENSEIKRQLEVTSACLFSPNNQDTFTTLLQA VIEDLCVCGAGAIEPELGGDKLRPLWMWPVDALSIQIYADWDGDEAKPRYCQTYGYGNVGVAQGVNLLNRELVYIRDRVT TDSPFSFGMLEIAFESINRLLGVAEYAGDIAANAHPENLIFLQEASQETIEAFRGYWRNEIEGQGQVPIIGGKDAKVLNL RGASDEALYLKYQEFVIREIAVAFGISAQNLGVEQNINRNNGEVAEDRDWDLSIKPMARAIASYLNREVIWGLLGHTQIE LTPGGLDREDEKATADIYTLEYKGNAITPNEYRARRNMPPLKSKFGDMVFADAQIAIEAARGAKQVNPELTNIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44017; Mature: 44017
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDARPLIKPVPANLRYFSKTPYASRAIQIYTRSITSLEWAVKVKKDVAENSEIKRQLEV CCCCCCCCCCCCCCCEEECCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHH TSACLFSPNNQDTFTTLLQAVIEDLCVCGAGAIEPELGGDKLRPLWMWPVDALSIQIYAD HHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEE WDGDEAKPRYCQTYGYGNVGVAQGVNLLNRELVYIRDRVTTDSPFSFGMLEIAFESINRL CCCCCCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH LGVAEYAGDIAANAHPENLIFLQEASQETIEAFRGYWRNEIEGQGQVPIIGGKDAKVLNL HHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEE RGASDEALYLKYQEFVIREIAVAFGISAQNLGVEQNINRNNGEVAEDRDWDLSIKPMARA CCCCCCEEEEHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHH IASYLNREVIWGLLGHTQIELTPGGLDREDEKATADIYTLEYKGNAITPNEYRARRNMPP HHHHHCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCC LKSKFGDMVFADAQIAIEAARGAKQVNPELTNIE HHHHHCCEEEECHHHEEEHHCCCHHCCCCCCCCC >Mature Secondary Structure MRDARPLIKPVPANLRYFSKTPYASRAIQIYTRSITSLEWAVKVKKDVAENSEIKRQLEV CCCCCCCCCCCCCCCEEECCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHH TSACLFSPNNQDTFTTLLQAVIEDLCVCGAGAIEPELGGDKLRPLWMWPVDALSIQIYAD HHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEE WDGDEAKPRYCQTYGYGNVGVAQGVNLLNRELVYIRDRVTTDSPFSFGMLEIAFESINRL CCCCCCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH LGVAEYAGDIAANAHPENLIFLQEASQETIEAFRGYWRNEIEGQGQVPIIGGKDAKVLNL HHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEE RGASDEALYLKYQEFVIREIAVAFGISAQNLGVEQNINRNNGEVAEDRDWDLSIKPMARA CCCCCCEEEEHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHH IASYLNREVIWGLLGHTQIELTPGGLDREDEKATADIYTLEYKGNAITPNEYRARRNMPP HHHHHCHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCC LKSKFGDMVFADAQIAIEAARGAKQVNPELTNIE HHHHHCCEEEECHHHEEEHHCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA