Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yeaH [C]

Identifier: 238027459

GI number: 238027459

Start: 2041928

End: 2043193

Strand: Reverse

Name: yeaH [C]

Synonym: bglu_1g18620

Alternate gene names: 238027459

Gene position: 2043193-2041928 (Counterclockwise)

Preceding gene: 238027460

Following gene: 238027458

Centisome position: 52.3

GC content: 64.53

Gene sequence:

>1266_bases
GTGCTTCATCAAATCATCGACCGCAGGCTGGCCGGCAAGAACAAGAGCATTGCAAACCGCGAGCGCTTTCTGCGTCGCGT
CAAGAACTACATTCGCCGGGCGGTGTCCGATGCCGTCCGCGACCGTAGCATCAAGGACATCCAAAGCACCCAGAGCATCA
CCATTCCACGCAAGGACATCGCGGAGCCCACGTTCCGCCATGCCTCCGGCGGGCGGCGCGAGCACGTGCATCCCGGCAAT
TCCGACTACATTCGCGGCGACAAGATCCCGCGCCCGCCGGGCGGCTCCGGCGGGGGCGGCAGCCAGGCCAGCAACGAGGG
CGAGGGGCAGGACGACTTCGTGTTCGAGCTGAGCCGCGAGGAATTCATGCAGTATTTCTTCGACGACCTGGAACTGCCGC
GGCTCGTGCAGACGCATCTGCTGGCGGTGCCGAGCTGGAAGAACGTGCGCGCGGGCTGGGCGGCGGAAGGCACGCCGAAC
AACATCGACGTGGTGCGCTCGCTGCGCAGCGCGCTGGGCCGGCGCATCGCGCTCGGCTCGCCGCTCGTGGCCGAGCTGCG
CGGGCTGGAGGCACGGCTCGAGGCGCTGCAAGACGACCCCGGCGACCACCGCGTCGAGATCGCCGAGCTCGAGGCGCAGA
TCCATCACCTGAAAGGGCGCATCTGGCGGATTCCGTTCATCGATCCGTTCGACCTGCGCTACGTGAACCGCGTGAAGCAG
CCGCAACCGTCGAGCCAGGCCGTGATGTTCTGCCTGATGGACGTGTCGGGCTCGATGGACGAGCAGCGCAAGGATCTCGC
CAAGCGTTTCTTCATCCTGCTCTACCTGTTCCTGAAGCGAAACTACGAGCGCATCGAGGTGGTGTTCATCCGCCATCACA
CGCGCGCCGAGGAAGTCGACGAGGACACCTTCTTCCATTCCACCGAGAGCGGCGGCACGGTCGTGTCGAGCGCGCTCGAA
CTGATGCGCAAGGTGATGAACGAGCGCTACTCGCCGACCGAATGGAACATCTACGGCGCGCAGGCCTCGGACGGCGACAA
CTGGACCGACGACTCGCCGAAGTGCCGCAAGATCCTGCAGGAGGACATCCTCACCAAGACGCGTTACTTCGCCTATATCC
AGGTGGCGCCGGAAGAGCAGAATCTGTGGCTCGAATACGCGCAGCTCGCGCTGTCGCAGCCGCACATGGCGATGAAGAAG
GCCGAGTCGGCCGCGGACATCTACCCGGTGTTCCGCGAGCTGTTCGAAAAACACGTGGAAACCTGA

Upstream 100 bases:

>100_bases
CGTCCGCGCGGCCTGGCCGCGCGGGCACCCTGAGCGACGCGCCGCACGGTGGATCGTGCGGCACGTCCCGGCGTATCGAC
TTTCGAGCGGGAGACCGGGA

Downstream 100 bases:

>100_bases
TGGCATGACGACACGCCACCCGGACAACGCGGCGCGCGGCTGGCAGGCGCGCCACACGGGCGACGACGCGCCCGGCCCCG
GCACCGATCGAGCCGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPTFRHASGGRREHVHPGN
SDYIRGDKIPRPPGGSGGGGSQASNEGEGQDDFVFELSREEFMQYFFDDLELPRLVQTHLLAVPSWKNVRAGWAAEGTPN
NIDVVRSLRSALGRRIALGSPLVAELRGLEARLEALQDDPGDHRVEIAELEAQIHHLKGRIWRIPFIDPFDLRYVNRVKQ
PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE
LMRKVMNERYSPTEWNIYGAQASDGDNWTDDSPKCRKILQEDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHMAMKK
AESAADIYPVFRELFEKHVET

Sequences:

>Translated_421_residues
MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPTFRHASGGRREHVHPGN
SDYIRGDKIPRPPGGSGGGGSQASNEGEGQDDFVFELSREEFMQYFFDDLELPRLVQTHLLAVPSWKNVRAGWAAEGTPN
NIDVVRSLRSALGRRIALGSPLVAELRGLEARLEALQDDPGDHRVEIAELEAQIHHLKGRIWRIPFIDPFDLRYVNRVKQ
PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE
LMRKVMNERYSPTEWNIYGAQASDGDNWTDDSPKCRKILQEDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHMAMKK
AESAADIYPVFRELFEKHVET
>Mature_421_residues
MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDIAEPTFRHASGGRREHVHPGN
SDYIRGDKIPRPPGGSGGGGSQASNEGEGQDDFVFELSREEFMQYFFDDLELPRLVQTHLLAVPSWKNVRAGWAAEGTPN
NIDVVRSLRSALGRRIALGSPLVAELRGLEARLEALQDDPGDHRVEIAELEAQIHHLKGRIWRIPFIDPFDLRYVNRVKQ
PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSALE
LMRKVMNERYSPTEWNIYGAQASDGDNWTDDSPKCRKILQEDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHMAMKK
AESAADIYPVFRELFEKHVET

Specific function: Unknown

COG id: COG2718

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0229 family [H]

Homologues:

Organism=Escherichia coli, GI1788084, Length=421, Percent_Identity=52.0190023752969, Blast_Score=437, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006698 [H]

Pfam domain/function: PF04285 DUF444 [H]

EC number: NA

Molecular weight: Translated: 48421; Mature: 48421

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHH
AEPTFRHASGGRREHVHPGNSDYIRGDKIPRPPGGSGGGGSQASNEGEGQDDFVFELSRE
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEHHHH
EFMQYFFDDLELPRLVQTHLLAVPSWKNVRAGWAAEGTPNNIDVVRSLRSALGRRIALGS
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PLVAELRGLEARLEALQDDPGDHRVEIAELEAQIHHLKGRIWRIPFIDPFDLRYVNRVKQ
CHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCC
PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCC
EDTFFHSTESGGTVVSSALELMRKVMNERYSPTEWNIYGAQASDGDNWTDDSPKCRKILQ
CHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
EDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHMAMKKAESAADIYPVFRELFEKHVE
HHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T
C
>Mature Secondary Structure
MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHH
AEPTFRHASGGRREHVHPGNSDYIRGDKIPRPPGGSGGGGSQASNEGEGQDDFVFELSRE
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEHHHH
EFMQYFFDDLELPRLVQTHLLAVPSWKNVRAGWAAEGTPNNIDVVRSLRSALGRRIALGS
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PLVAELRGLEARLEALQDDPGDHRVEIAELEAQIHHLKGRIWRIPFIDPFDLRYVNRVKQ
CHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCC
PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCC
EDTFFHSTESGGTVVSSALELMRKVMNERYSPTEWNIYGAQASDGDNWTDDSPKCRKILQ
CHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
EDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHMAMKKAESAADIYPVFRELFEKHVE
HHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA