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The map label for this gene is cobM [H]

Identifier: 238027437

GI number: 238027437

Start: 2013496

End: 2014221

Strand: Reverse

Name: cobM [H]

Synonym: bglu_1g18400

Alternate gene names: 238027437

Gene position: 2014221-2013496 (Counterclockwise)

Preceding gene: 238027438

Following gene: 238027430

Centisome position: 51.56

GC content: 71.63

Gene sequence:

>726_bases
ATGACGGTGTATTTCATCGGCGCGGGGCCGGGCGACCCCGAGCTGATCACGGTGAAGGGCCAGCGCCTCGTGCGCGCCTG
CCCGGTGATCCTCTATGCCGGCTCGCTGGTGCCGGCCGCGGTGCTCGACGGCCATCGCGCCCACACGGTGGTCAACACGG
CCGAGCTGGATCTGGACGCGATCGTCGCGCTGCTCGCCGATGCGCATGCGAAGGGGCAGGACGTGGCGCGCGTGCATTCC
GGCGACCCCTCGCTGTACGGCGCGATCGGCGAACAGATCCGCCGCCTGCGCGCGCTCGGGATCGATTACCAGATCGTGCC
CGGCGTGACCGCCACGGCGGCCTGCGCGGCCACCCTCGGCGTCGAGCTGACGCTGCCCGGCGTCGCGCAGACGGTGATCC
TCACGCGCTACGCGGGCAAGACCACGATGCCGCAAGGCGAGGCGCTGAGCGGGCTCGCCGCGCACCGCGCGACGCTGGCG
ATCCACCTGGGCGTGCGGCATCTGGCGAAGATCGTCGAGGAGGTGCGCCCGCACTACGGCGACGACTGCCCGATCGCCGT
GATCTATCGCGCGAGCTGGCCCGACGAGACGCGCGTGACGGGGACGCTGGCCGACATCGTCGGCAGGATCGCCGCCACCG
CGATCGAGCGCACGGCGCTGATCCTGATCGGCCGCGTGCTCGACACCGACCGGTTCGACGAATCGACGCTCTACGCCAAG
GGCTGA

Upstream 100 bases:

>100_bases
CCGCCCGCTCCGCGCATGCGCTGCCGGGCGCGCCGGCCGGCCCGGGCGCGCGGCGCCGCAGCCGGCCGGCGCCCTGCCAT
TCCAACGGAGAACACGACAG

Downstream 100 bases:

>100_bases
GCCGCGCCGCGCAGGTGAGGCGGGCAGCCGTGGGCAGGCGCCGGAAGCGGGGCGGCCGGACGAGCGGCGGCGCCCGCCCG
AGCGTTCAGTCGTGCGCTCA

Product: Precorrin-4 C11-methyltransferase

Products: NA

Alternate protein names: Precorrin-3 methylase [H]

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTVYFIGAGPGDPELITVKGQRLVRACPVILYAGSLVPAAVLDGHRAHTVVNTAELDLDAIVALLADAHAKGQDVARVHS
GDPSLYGAIGEQIRRLRALGIDYQIVPGVTATAACAATLGVELTLPGVAQTVILTRYAGKTTMPQGEALSGLAAHRATLA
IHLGVRHLAKIVEEVRPHYGDDCPIAVIYRASWPDETRVTGTLADIVGRIAATAIERTALILIGRVLDTDRFDESTLYAK
G

Sequences:

>Translated_241_residues
MTVYFIGAGPGDPELITVKGQRLVRACPVILYAGSLVPAAVLDGHRAHTVVNTAELDLDAIVALLADAHAKGQDVARVHS
GDPSLYGAIGEQIRRLRALGIDYQIVPGVTATAACAATLGVELTLPGVAQTVILTRYAGKTTMPQGEALSGLAAHRATLA
IHLGVRHLAKIVEEVRPHYGDDCPIAVIYRASWPDETRVTGTLADIVGRIAATAIERTALILIGRVLDTDRFDESTLYAK
G
>Mature_240_residues
TVYFIGAGPGDPELITVKGQRLVRACPVILYAGSLVPAAVLDGHRAHTVVNTAELDLDAIVALLADAHAKGQDVARVHSG
DPSLYGAIGEQIRRLRALGIDYQIVPGVTATAACAATLGVELTLPGVAQTVILTRYAGKTTMPQGEALSGLAAHRATLAI
HLGVRHLAKIVEEVRPHYGDDCPIAVIYRASWPDETRVTGTLADIVGRIAATAIERTALILIGRVLDTDRFDESTLYAKG

Specific function: Catalyzes the methylation of C-11 in precorrin-4 to form precorrin-5 [H]

COG id: COG2875

COG function: function code H; Precorrin-4 methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the precorrin methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789768, Length=240, Percent_Identity=31.25, Blast_Score=90, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6322922, Length=258, Percent_Identity=25.1937984496124, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR006362
- InterPro:   IPR003043 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: =2.1.1.133 [H]

Molecular weight: Translated: 25413; Mature: 25281

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00839 SUMT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVYFIGAGPGDPELITVKGQRLVRACPVILYAGSLVPAAVLDGHRAHTVVNTAELDLDA
CEEEEEECCCCCCCEEEECCHHHHHHHHHHEEECCCHHHHHHCCCCCEEEEEHHHCCHHH
IVALLADAHAKGQDVARVHSGDPSLYGAIGEQIRRLRALGIDYQIVPGVTATAACAATLG
HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHC
VELTLPGVAQTVILTRYAGKTTMPQGEALSGLAAHRATLAIHLGVRHLAKIVEEVRPHYG
EEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCC
DDCPIAVIYRASWPDETRVTGTLADIVGRIAATAIERTALILIGRVLDTDRFDESTLYAK
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
G
C
>Mature Secondary Structure 
TVYFIGAGPGDPELITVKGQRLVRACPVILYAGSLVPAAVLDGHRAHTVVNTAELDLDA
EEEEEECCCCCCCEEEECCHHHHHHHHHHEEECCCHHHHHHCCCCCEEEEEHHHCCHHH
IVALLADAHAKGQDVARVHSGDPSLYGAIGEQIRRLRALGIDYQIVPGVTATAACAATLG
HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHC
VELTLPGVAQTVILTRYAGKTTMPQGEALSGLAAHRATLAIHLGVRHLAKIVEEVRPHYG
EEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCC
DDCPIAVIYRASWPDETRVTGTLADIVGRIAATAIERTALILIGRVLDTDRFDESTLYAK
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]