| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027150
Identifier: 238027150
GI number: 238027150
Start: 1694729
End: 1695223
Strand: Reverse
Name: 238027150
Synonym: bglu_1g15350
Alternate gene names: NA
Gene position: 1695223-1694729 (Counterclockwise)
Preceding gene: 238027151
Following gene: 238027149
Centisome position: 43.39
GC content: 66.26
Gene sequence:
>495_bases ATGAAGTCTCTCGCCCACCTCACCAGCCGTCGCGCGAAGTTCGAGGCGTTCCTCGTCGAACGCGGCGCGCAGATCCTGCA GCCGACGAACGAGTGGGAGGTGCTCCGCTTCAAAACCTCGCGCGGCACGTCGATCGTTTACTGCAACGCGCGTGGCGGCG TCACGCCAACCGGCGAAGCCACAGCAGCATGGGATGCGTTCGAGAAATGCAAACCTTGGCGCGCCGCGCCCGCGCCGAAG AAGCGCGTCAAGGGTCGCGAGCGTTTGCTCCCGCTGTATCAAGCGCTGCTGAAGCGCGACGGCGCCGCATGCTTTTACTG CGGCGAGCCGACCGACGAAGCCGACCGGACGCTCGAGCACCTGGTGGCGCGTGCACACGGCGGCCCCGACCACCTCAGCA ATCTCGTCCTTGCGCACCGCCGGTGCAATGCGAACGCCGGGCACCTCAGCGCGATGGAGAAGATTCGCATGCGAGAACTC GCGAGGCAACCGTGA
Upstream 100 bases:
>100_bases TCCGCTACGTGATCGAGGGCGCCGCATGGGCGGGCGCGTGCGGCGTCGGCGTCGGCGCGCTCTGGTACAGCGCGCTGCTG GCGCGTGCAGGGGGCTGGCT
Downstream 100 bases:
>100_bases CGCCCTTCGACTACATCGGCCAATTGCTCGATCGCGCCTACGCGAAGAACAAAGCGCTCGGCTTTCTCCTTGCGCTGCTG ATCGTCATGATCGCTACCGC
Product: HNH endonuclease
Products: NA
Alternate protein names: HNH Nuclease
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKSLAHLTSRRAKFEAFLVERGAQILQPTNEWEVLRFKTSRGTSIVYCNARGGVTPTGEATAAWDAFEKCKPWRAAPAPK KRVKGRERLLPLYQALLKRDGAACFYCGEPTDEADRTLEHLVARAHGGPDHLSNLVLAHRRCNANAGHLSAMEKIRMREL ARQP
Sequences:
>Translated_164_residues MKSLAHLTSRRAKFEAFLVERGAQILQPTNEWEVLRFKTSRGTSIVYCNARGGVTPTGEATAAWDAFEKCKPWRAAPAPK KRVKGRERLLPLYQALLKRDGAACFYCGEPTDEADRTLEHLVARAHGGPDHLSNLVLAHRRCNANAGHLSAMEKIRMREL ARQP >Mature_164_residues MKSLAHLTSRRAKFEAFLVERGAQILQPTNEWEVLRFKTSRGTSIVYCNARGGVTPTGEATAAWDAFEKCKPWRAAPAPK KRVKGRERLLPLYQALLKRDGAACFYCGEPTDEADRTLEHLVARAHGGPDHLSNLVLAHRRCNANAGHLSAMEKIRMREL ARQP
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18361; Mature: 18361
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLAHLTSRRAKFEAFLVERGAQILQPTNEWEVLRFKTSRGTSIVYCNARGGVTPTGEA CCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCC TAAWDAFEKCKPWRAAPAPKKRVKGRERLLPLYQALLKRDGAACFYCGEPTDEADRTLEH HHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH LVARAHGGPDHLSNLVLAHRRCNANAGHLSAMEKIRMRELARQP HHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSLAHLTSRRAKFEAFLVERGAQILQPTNEWEVLRFKTSRGTSIVYCNARGGVTPTGEA CCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCC TAAWDAFEKCKPWRAAPAPKKRVKGRERLLPLYQALLKRDGAACFYCGEPTDEADRTLEH HHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH LVARAHGGPDHLSNLVLAHRRCNANAGHLSAMEKIRMRELARQP HHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA