Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027150

Identifier: 238027150

GI number: 238027150

Start: 1694729

End: 1695223

Strand: Reverse

Name: 238027150

Synonym: bglu_1g15350

Alternate gene names: NA

Gene position: 1695223-1694729 (Counterclockwise)

Preceding gene: 238027151

Following gene: 238027149

Centisome position: 43.39

GC content: 66.26

Gene sequence:

>495_bases
ATGAAGTCTCTCGCCCACCTCACCAGCCGTCGCGCGAAGTTCGAGGCGTTCCTCGTCGAACGCGGCGCGCAGATCCTGCA
GCCGACGAACGAGTGGGAGGTGCTCCGCTTCAAAACCTCGCGCGGCACGTCGATCGTTTACTGCAACGCGCGTGGCGGCG
TCACGCCAACCGGCGAAGCCACAGCAGCATGGGATGCGTTCGAGAAATGCAAACCTTGGCGCGCCGCGCCCGCGCCGAAG
AAGCGCGTCAAGGGTCGCGAGCGTTTGCTCCCGCTGTATCAAGCGCTGCTGAAGCGCGACGGCGCCGCATGCTTTTACTG
CGGCGAGCCGACCGACGAAGCCGACCGGACGCTCGAGCACCTGGTGGCGCGTGCACACGGCGGCCCCGACCACCTCAGCA
ATCTCGTCCTTGCGCACCGCCGGTGCAATGCGAACGCCGGGCACCTCAGCGCGATGGAGAAGATTCGCATGCGAGAACTC
GCGAGGCAACCGTGA

Upstream 100 bases:

>100_bases
TCCGCTACGTGATCGAGGGCGCCGCATGGGCGGGCGCGTGCGGCGTCGGCGTCGGCGCGCTCTGGTACAGCGCGCTGCTG
GCGCGTGCAGGGGGCTGGCT

Downstream 100 bases:

>100_bases
CGCCCTTCGACTACATCGGCCAATTGCTCGATCGCGCCTACGCGAAGAACAAAGCGCTCGGCTTTCTCCTTGCGCTGCTG
ATCGTCATGATCGCTACCGC

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Nuclease

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKSLAHLTSRRAKFEAFLVERGAQILQPTNEWEVLRFKTSRGTSIVYCNARGGVTPTGEATAAWDAFEKCKPWRAAPAPK
KRVKGRERLLPLYQALLKRDGAACFYCGEPTDEADRTLEHLVARAHGGPDHLSNLVLAHRRCNANAGHLSAMEKIRMREL
ARQP

Sequences:

>Translated_164_residues
MKSLAHLTSRRAKFEAFLVERGAQILQPTNEWEVLRFKTSRGTSIVYCNARGGVTPTGEATAAWDAFEKCKPWRAAPAPK
KRVKGRERLLPLYQALLKRDGAACFYCGEPTDEADRTLEHLVARAHGGPDHLSNLVLAHRRCNANAGHLSAMEKIRMREL
ARQP
>Mature_164_residues
MKSLAHLTSRRAKFEAFLVERGAQILQPTNEWEVLRFKTSRGTSIVYCNARGGVTPTGEATAAWDAFEKCKPWRAAPAPK
KRVKGRERLLPLYQALLKRDGAACFYCGEPTDEADRTLEHLVARAHGGPDHLSNLVLAHRRCNANAGHLSAMEKIRMREL
ARQP

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18361; Mature: 18361

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLAHLTSRRAKFEAFLVERGAQILQPTNEWEVLRFKTSRGTSIVYCNARGGVTPTGEA
CCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCC
TAAWDAFEKCKPWRAAPAPKKRVKGRERLLPLYQALLKRDGAACFYCGEPTDEADRTLEH
HHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
LVARAHGGPDHLSNLVLAHRRCNANAGHLSAMEKIRMRELARQP
HHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSLAHLTSRRAKFEAFLVERGAQILQPTNEWEVLRFKTSRGTSIVYCNARGGVTPTGEA
CCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCC
TAAWDAFEKCKPWRAAPAPKKRVKGRERLLPLYQALLKRDGAACFYCGEPTDEADRTLEH
HHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
LVARAHGGPDHLSNLVLAHRRCNANAGHLSAMEKIRMRELARQP
HHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA