| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027138
Identifier: 238027138
GI number: 238027138
Start: 1683622
End: 1685022
Strand: Reverse
Name: 238027138
Synonym: bglu_1g15220
Alternate gene names: NA
Gene position: 1685022-1683622 (Counterclockwise)
Preceding gene: 238027139
Following gene: 238027137
Centisome position: 43.13
GC content: 62.1
Gene sequence:
>1401_bases ATGGATGCGAACGGCTGGAAAGACGACGCATTGACGCTCAGGCTGCTGCTTTCCGCGCATGATGTCGAATCTGTAGTGTC GATGATGAAAGCCCTTCAGTTTATCGACTCCGAACTCACCGAATATCTTGAAGGAATGCCCGCAGACGAAACAAGCCGCA AGCTTCGCGACGTGGCACGCGACGCGCTGAATGTCGAGCGCGCAGCAGTATCGCCGGCCACGGCCGACCGCATTCCCGAC GAGTGTGCAGCGTCGGGTGGCTCGTGCAGCTATGCGCCTGATGGTCGGCACGGCGAAATGCAGTGCAGATATTGCGGAAA AGAGAAGACGGCCACGGCCGACGAGCGCCACGAAGACGGGTTACTGACGACGGAAGCGCTGATAAGCATCATCGAGCGAC ATTTCGACCACGATCATCCGGACGGCCAGCGTCTTGTCGAAATGGCGCAGGATGTGGCCGCATCTCAGCACAAGCAGGGT GAGCCGGCCACGGCCGAAGATGGCGGATGGGCGGCATTCGAGCCGTGGTTCGAGCGCGCATGGCTGCTGAACCCCGACAA AGATTTCAGCGATCGAATCCGCTGCAAAGCATGGGCATGGAAAACGTGGAAGCACCTTCGCGGCGAAGCGCCGGCCACGG CCGACACGACCGGCTACTGCACACGCTCTGTTTGCGGTTGCGAAGGCAGCAGGATCGAAACGAAACAGGGCTGCTATCAC TGGCGCATTGTTTCAGAGACGGCCACGGCCGACGAGCGGGCGGCGCTGCGCGAGATGCTGGACGATGCGCGCAATGAATT CACGATGGTCCGCGAAGCGCTCGGCGTCGCATATGAGCCGCACCAGACGTTGCTTGAGCGCACGCTCGACGCTGCCCGCG CATCGCAGGCCGCCGCACCTCAAGCGAACGCTGCCGAAGAGTCGGAGGATGCCTACGTGATCCGCCGTCTGAGCGAAACG CTTGCAGATGTTGCCGTGACCCTTCGCGGCGACGATCCTGTGCATCCCGACGATCCGCTCAACAAGATCGAACTGGTTAA ACGACTCGCCGAAGTGCTCCGTATGGAAGTCGAGCTTTATCGAGCACAGGCCGCCGCACCGGCCGATGCGCGCGAGCCTC AATGGTCTAGAGACATCATCGCAGACTTGCAGGGCCTATTCGATACTGATGGCATCACGGAAAACGACTCTGGCGACGCG CTGATTCGGCTTTCCGACGCCATCGCGGCTGTCGAGAACGCGCGGGCCGGCGCCCCTGCTGATGCGGGAGAGGCGGTGGG TGTCGCCGACAGCATGCCGGGCACTAGCGGCTTCACGATGGCGTGCTTCGAGGCGGCGAAGGTTCCCATTGGCACGAAGC TGTACGCCGCTGCGCAGGGTGGGAAGGGAGGCGAAGCGTGA
Upstream 100 bases:
>100_bases CGCGGAATTCCTCGCACCTGCCGCTCAGGCTGTCGCCGCTGATGGGGCGACCACGCAGGCAAATCGTACATCAAACGGTC TTTGGGATCTTGCAGATGAG
Downstream 100 bases:
>100_bases AAACAGTCCTCGCATGGATTGGGGGTGCAGTCGTCGGCCTTTACGCGGCCGGCTGCTTCGGACCCGGCCATTTCGTTCTG TACTACGGTGAGCGCGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MDANGWKDDALTLRLLLSAHDVESVVSMMKALQFIDSELTEYLEGMPADETSRKLRDVARDALNVERAAVSPATADRIPD ECAASGGSCSYAPDGRHGEMQCRYCGKEKTATADERHEDGLLTTEALISIIERHFDHDHPDGQRLVEMAQDVAASQHKQG EPATAEDGGWAAFEPWFERAWLLNPDKDFSDRIRCKAWAWKTWKHLRGEAPATADTTGYCTRSVCGCEGSRIETKQGCYH WRIVSETATADERAALREMLDDARNEFTMVREALGVAYEPHQTLLERTLDAARASQAAAPQANAAEESEDAYVIRRLSET LADVAVTLRGDDPVHPDDPLNKIELVKRLAEVLRMEVELYRAQAAAPADAREPQWSRDIIADLQGLFDTDGITENDSGDA LIRLSDAIAAVENARAGAPADAGEAVGVADSMPGTSGFTMACFEAAKVPIGTKLYAAAQGGKGGEA
Sequences:
>Translated_466_residues MDANGWKDDALTLRLLLSAHDVESVVSMMKALQFIDSELTEYLEGMPADETSRKLRDVARDALNVERAAVSPATADRIPD ECAASGGSCSYAPDGRHGEMQCRYCGKEKTATADERHEDGLLTTEALISIIERHFDHDHPDGQRLVEMAQDVAASQHKQG EPATAEDGGWAAFEPWFERAWLLNPDKDFSDRIRCKAWAWKTWKHLRGEAPATADTTGYCTRSVCGCEGSRIETKQGCYH WRIVSETATADERAALREMLDDARNEFTMVREALGVAYEPHQTLLERTLDAARASQAAAPQANAAEESEDAYVIRRLSET LADVAVTLRGDDPVHPDDPLNKIELVKRLAEVLRMEVELYRAQAAAPADAREPQWSRDIIADLQGLFDTDGITENDSGDA LIRLSDAIAAVENARAGAPADAGEAVGVADSMPGTSGFTMACFEAAKVPIGTKLYAAAQGGKGGEA >Mature_466_residues MDANGWKDDALTLRLLLSAHDVESVVSMMKALQFIDSELTEYLEGMPADETSRKLRDVARDALNVERAAVSPATADRIPD ECAASGGSCSYAPDGRHGEMQCRYCGKEKTATADERHEDGLLTTEALISIIERHFDHDHPDGQRLVEMAQDVAASQHKQG EPATAEDGGWAAFEPWFERAWLLNPDKDFSDRIRCKAWAWKTWKHLRGEAPATADTTGYCTRSVCGCEGSRIETKQGCYH WRIVSETATADERAALREMLDDARNEFTMVREALGVAYEPHQTLLERTLDAARASQAAAPQANAAEESEDAYVIRRLSET LADVAVTLRGDDPVHPDDPLNKIELVKRLAEVLRMEVELYRAQAAAPADAREPQWSRDIIADLQGLFDTDGITENDSGDA LIRLSDAIAAVENARAGAPADAGEAVGVADSMPGTSGFTMACFEAAKVPIGTKLYAAAQGGKGGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50694; Mature: 50694
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDANGWKDDALTLRLLLSAHDVESVVSMMKALQFIDSELTEYLEGMPADETSRKLRDVAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DALNVERAAVSPATADRIPDECAASGGSCSYAPDGRHGEMQCRYCGKEKTATADERHEDG HHHHHHHHHCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCC LLTTEALISIIERHFDHDHPDGQRLVEMAQDVAASQHKQGEPATAEDGGWAAFEPWFERA CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHHHCC WLLNPDKDFSDRIRCKAWAWKTWKHLRGEAPATADTTGYCTRSVCGCEGSRIETKQGCYH CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEE WRIVSETATADERAALREMLDDARNEFTMVREALGVAYEPHQTLLERTLDAARASQAAAP EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC QANAAEESEDAYVIRRLSETLADVAVTLRGDDPVHPDDPLNKIELVKRLAEVLRMEVELY CCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RAQAAAPADAREPQWSRDIIADLQGLFDTDGITENDSGDALIRLSDAIAAVENARAGAPA HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCC DAGEAVGVADSMPGTSGFTMACFEAAKVPIGTKLYAAAQGGKGGEA CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MDANGWKDDALTLRLLLSAHDVESVVSMMKALQFIDSELTEYLEGMPADETSRKLRDVAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DALNVERAAVSPATADRIPDECAASGGSCSYAPDGRHGEMQCRYCGKEKTATADERHEDG HHHHHHHHHCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCC LLTTEALISIIERHFDHDHPDGQRLVEMAQDVAASQHKQGEPATAEDGGWAAFEPWFERA CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHHHCC WLLNPDKDFSDRIRCKAWAWKTWKHLRGEAPATADTTGYCTRSVCGCEGSRIETKQGCYH CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEE WRIVSETATADERAALREMLDDARNEFTMVREALGVAYEPHQTLLERTLDAARASQAAAP EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC QANAAEESEDAYVIRRLSETLADVAVTLRGDDPVHPDDPLNKIELVKRLAEVLRMEVELY CCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RAQAAAPADAREPQWSRDIIADLQGLFDTDGITENDSGDALIRLSDAIAAVENARAGAPA HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCC DAGEAVGVADSMPGTSGFTMACFEAAKVPIGTKLYAAAQGGKGGEA CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA