| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is bolA [C]
Identifier: 238026988
GI number: 238026988
Start: 1507009
End: 1507323
Strand: Reverse
Name: bolA [C]
Synonym: bglu_1g13660
Alternate gene names: 238026988
Gene position: 1507323-1507009 (Counterclockwise)
Preceding gene: 238026989
Following gene: 238026987
Centisome position: 38.58
GC content: 66.98
Gene sequence:
>315_bases ATGACGATGGCCGACGACTTCCTGAACGCGGCGCCCGAGGCGCGCATGGCGCTGATCGAGGCGCGCCTCGCCGCCGCGCT CGCGCCCGAGTCCCTGCATGTCAGCGACGACAGCGCACAGCATGCCGGTCATGCCGGTGCCTCGGCGGGCGGGCATTATA CGGTGACGATCGTGTCCGCCGCGTTTGCCGGCAAGTCGCGCGTGGCACGGCACCGGCTGGTGTATGATGCGCTCGCCGAT GCCATGCAGCGCGGGATTCACGCGCTCGCGATCGTGGCTTACACGCCCGATGAATTCAATGTGTCTTCCCAATAA
Upstream 100 bases:
>100_bases TGTCGCAATGGGTCAACTTCAAGCTGTTCGGCACCACCGGCGCGATGTTCGTGTTCATCATCCTGCAGAGCCTGTGGCTC GCGAAATACCTCAAAGAAGA
Downstream 100 bases:
>100_bases AGTTTCGTTTCGCTAGGAATTCCCGATGATCCTGAAATCCCCCCGTCTGTGGGTCGCGGCCGCCGCATTCGTCGCCGCAC CGGCATTTGCCCAGAACGTT
Product: BolA family protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTMADDFLNAAPEARMALIEARLAAALAPESLHVSDDSAQHAGHAGASAGGHYTVTIVSAAFAGKSRVARHRLVYDALAD AMQRGIHALAIVAYTPDEFNVSSQ
Sequences:
>Translated_104_residues MTMADDFLNAAPEARMALIEARLAAALAPESLHVSDDSAQHAGHAGASAGGHYTVTIVSAAFAGKSRVARHRLVYDALAD AMQRGIHALAIVAYTPDEFNVSSQ >Mature_103_residues TMADDFLNAAPEARMALIEARLAAALAPESLHVSDDSAQHAGHAGASAGGHYTVTIVSAAFAGKSRVARHRLVYDALADA MQRGIHALAIVAYTPDEFNVSSQ
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Homo sapiens, GI7705638, Length=88, Percent_Identity=42.0454545454545, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI87081740, Length=82, Percent_Identity=39.0243902439024, Blast_Score=62, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 10860; Mature: 10729
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMADDFLNAAPEARMALIEARLAAALAPESLHVSDDSAQHAGHAGASAGGHYTVTIVSA CCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCHHCCCCCCCCCCEEEEEEEEH AFAGKSRVARHRLVYDALADAMQRGIHALAIVAYTPDEFNVSSQ HHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure TMADDFLNAAPEARMALIEARLAAALAPESLHVSDDSAQHAGHAGASAGGHYTVTIVSA CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCHHCCCCCCCCCCEEEEEEEEH AFAGKSRVARHRLVYDALADAMQRGIHALAIVAYTPDEFNVSSQ HHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1917840 [H]