| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026951
Identifier: 238026951
GI number: 238026951
Start: 1449540
End: 1450784
Strand: Reverse
Name: 238026951
Synonym: bglu_1g13260
Alternate gene names: NA
Gene position: 1450784-1449540 (Counterclockwise)
Preceding gene: 238026952
Following gene: 238026950
Centisome position: 37.14
GC content: 72.53
Gene sequence:
>1245_bases ATGAAAAAATTCGTTGCCGCCGCCGCCGCCGTCTCGCTGCTCGCCGTCTCGGCGAGCGTGTTCGCGGCCGTGCCGTCGCT GGCGCAGGTCGAGCAATCGGTCAGCCAGCGCAACTGGCAACGCGCCGACGCCCAGCTCTCGGAAGTGATCCAGGCGCATC CCGACAGCGCGCGCGCGCATTACCTGTACGGCCAGGTGCTCGATCGCGAGGGCCGCGCGGCCGACGCGCTCGCGCAGATC GAGCGCGCGAAGTCGCTCGATCCGTCGATCCATTTCACCAACCCGTCCACGTTCGCGCAAACCGAGGCACGCGTGCGGGC CGACGCGAACCGCGCCGGCGAACGCCGCTCGGCCACCTCCGGCGGGGCGCTGCAGCCGCTCGCCCAGCCCCAGGCGGCCA CGCAGTCGGCGCCGTTCGCACCGGCCGCGCCGGCCCGGCACGGCCCGTCGGTCGGCATGTGGATCGCGCTCCTGCTGCTG GTGGCCGTGATCGCGCTGGTGCTGCGCTGGACGCTGCGCCGCGCGCGCTCGGGCGAGGACAAGCAGGCCGACGACGAGCG CCGCGCGCAACTGAAGCGCGCCACCGAACTGTTGAACGAAGTGCGGCCGCTCAAGCTCGACGCACGGCTGTCCACGGCAC CCGGCGCCGCCGCGCTGGCAAGCGACATCGAGGGCGTGGAAACCGATGCGCGCACGCTGGTCGAAACGCTGTCGACCGGC AAGAATCCGGTGCCGCCCTACCAGCTCGAGGACCTCGAGCACCGCTTCGCGAGCCTGAAGGCGCGCGTCGAGGGCCGCCC CGATCCGAACGCCGCGCCGGCCTCGCCGGCGGCCGGCACGGGATCGGTATTTGCTCAGGAGGCCGATCGATTGACGGGCA CCCAGGCCCAGCCGCCCTATCCGCCCTCGTACCCGCAGCAGCAGCCGTATCCGCCCTATCCGCCGCAACAGCCGCCCGTG ATCGTGCAGCAGGGCGGCGGCTTCGGCAGCGGCATGGGCGGCCTCCTGACCGGCGTGCTGCTCGGCGAGGCCATGTCGGG CGGCCGCGAGCGCGTGGTCGAGCGCGACGTGATCGTCGACGACGAGCGGCGCCGCGCGAATGACGGCTTGGGCGGCAGCG CCGACAACGGCGGCGGGAACGACGCTGGCTTCGACTTCGGTCAGGGCGGCAGTTGGGACAGCGGCGGCAACGACGGCGGC GTCGATCTGGGCAGCAGCAGCGACGACGACTGGAACAACAGCTGA
Upstream 100 bases:
>100_bases CGGCGCAGTAATCCATGCACCGGCCCCGCGCGGCGGGCATGCCGCTTGCCGCCGGCCGCGCGACACCGTCGAAAGAGGCA GGCTCGCCGCCTGAACACAG
Downstream 100 bases:
>100_bases GCGCCGGGCCGGCCAGCCGGCCCCTCTGCGCGCGCCCAAGCGGCGCCGACGCGGAGCGGCGGCCCGGAGTTCACGCGCAA CGGGCCGGCGACGGCCCGTT
Product: Tetratricopeptide repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKKFVAAAAAVSLLAVSASVFAAVPSLAQVEQSVSQRNWQRADAQLSEVIQAHPDSARAHYLYGQVLDREGRAADALAQI ERAKSLDPSIHFTNPSTFAQTEARVRADANRAGERRSATSGGALQPLAQPQAATQSAPFAPAAPARHGPSVGMWIALLLL VAVIALVLRWTLRRARSGEDKQADDERRAQLKRATELLNEVRPLKLDARLSTAPGAAALASDIEGVETDARTLVETLSTG KNPVPPYQLEDLEHRFASLKARVEGRPDPNAAPASPAAGTGSVFAQEADRLTGTQAQPPYPPSYPQQQPYPPYPPQQPPV IVQQGGGFGSGMGGLLTGVLLGEAMSGGRERVVERDVIVDDERRRANDGLGGSADNGGGNDAGFDFGQGGSWDSGGNDGG VDLGSSSDDDWNNS
Sequences:
>Translated_414_residues MKKFVAAAAAVSLLAVSASVFAAVPSLAQVEQSVSQRNWQRADAQLSEVIQAHPDSARAHYLYGQVLDREGRAADALAQI ERAKSLDPSIHFTNPSTFAQTEARVRADANRAGERRSATSGGALQPLAQPQAATQSAPFAPAAPARHGPSVGMWIALLLL VAVIALVLRWTLRRARSGEDKQADDERRAQLKRATELLNEVRPLKLDARLSTAPGAAALASDIEGVETDARTLVETLSTG KNPVPPYQLEDLEHRFASLKARVEGRPDPNAAPASPAAGTGSVFAQEADRLTGTQAQPPYPPSYPQQQPYPPYPPQQPPV IVQQGGGFGSGMGGLLTGVLLGEAMSGGRERVVERDVIVDDERRRANDGLGGSADNGGGNDAGFDFGQGGSWDSGGNDGG VDLGSSSDDDWNNS >Mature_414_residues MKKFVAAAAAVSLLAVSASVFAAVPSLAQVEQSVSQRNWQRADAQLSEVIQAHPDSARAHYLYGQVLDREGRAADALAQI ERAKSLDPSIHFTNPSTFAQTEARVRADANRAGERRSATSGGALQPLAQPQAATQSAPFAPAAPARHGPSVGMWIALLLL VAVIALVLRWTLRRARSGEDKQADDERRAQLKRATELLNEVRPLKLDARLSTAPGAAALASDIEGVETDARTLVETLSTG KNPVPPYQLEDLEHRFASLKARVEGRPDPNAAPASPAAGTGSVFAQEADRLTGTQAQPPYPPSYPQQQPYPPYPPQQPPV IVQQGGGFGSGMGGLLTGVLLGEAMSGGRERVVERDVIVDDERRRANDGLGGSADNGGGNDAGFDFGQGGSWDSGGNDGG VDLGSSSDDDWNNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43547; Mature: 43547
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFVAAAAAVSLLAVSASVFAAVPSLAQVEQSVSQRNWQRADAQLSEVIQAHPDSARAH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH YLYGQVLDREGRAADALAQIERAKSLDPSIHFTNPSTFAQTEARVRADANRAGERRSATS HHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCHHCCCC GGALQPLAQPQAATQSAPFAPAAPARHGPSVGMWIALLLLVAVIALVLRWTLRRARSGED CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KQADDERRAQLKRATELLNEVRPLKLDARLSTAPGAAALASDIEGVETDARTLVETLSTG CCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCC KNPVPPYQLEDLEHRFASLKARVEGRPDPNAAPASPAAGTGSVFAQEADRLTGTQAQPPY CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC PPSYPQQQPYPPYPPQQPPVIVQQGGGFGSGMGGLLTGVLLGEAMSGGRERVVERDVIVD CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCC DERRRANDGLGGSADNGGGNDAGFDFGQGGSWDSGGNDGGVDLGSSSDDDWNNS CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKFVAAAAAVSLLAVSASVFAAVPSLAQVEQSVSQRNWQRADAQLSEVIQAHPDSARAH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH YLYGQVLDREGRAADALAQIERAKSLDPSIHFTNPSTFAQTEARVRADANRAGERRSATS HHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCHHCCCC GGALQPLAQPQAATQSAPFAPAAPARHGPSVGMWIALLLLVAVIALVLRWTLRRARSGED CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KQADDERRAQLKRATELLNEVRPLKLDARLSTAPGAAALASDIEGVETDARTLVETLSTG CCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCC KNPVPPYQLEDLEHRFASLKARVEGRPDPNAAPASPAAGTGSVFAQEADRLTGTQAQPPY CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC PPSYPQQQPYPPYPPQQPPVIVQQGGGFGSGMGGLLTGVLLGEAMSGGRERVVERDVIVD CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCC DERRRANDGLGGSADNGGGNDAGFDFGQGGSWDSGGNDGGVDLGSSSDDDWNNS CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA