| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026944
Identifier: 238026944
GI number: 238026944
Start: 1442678
End: 1443871
Strand: Reverse
Name: 238026944
Synonym: bglu_1g13170
Alternate gene names: NA
Gene position: 1443871-1442678 (Counterclockwise)
Preceding gene: 238026945
Following gene: 238026932
Centisome position: 36.96
GC content: 66.33
Gene sequence:
>1194_bases ATGGAAGGCTTCATCAACGACTGGCTGAATCTCGCGATTCGCTGGTTGCACGTCATCGCCGCGATCGCCTGGATCGGCGA ATCGTTCTACTTCGTCGCCCTCGACAACAGCCTGACCCCGCCGAAGGACCCGAACCAGCGCCAGCGCGGCGTGTTCGGCG AGCTGTGGCACGTACACGGCGGCGGCTTCTACAACATGCAGAAGTACACGGTCGCGCCGCCCGCCATGCCGGAGCACCTG CACTGGTCGAAATGGCCGTCCTACACCACCTGGATGTCGGGCTTCGGGCTGTTCTTCGTGCTCTACCTGCTCGCGCCGAA CACCTACCTGATCGATCGCAACGTGCTCGACATGGGGCCGGTGGTGGCGGTCTCGGCCGCGCTCGGCTTCCTGATGGCCG GCTGGATCGTCTACGACTGCGCGTGCCGCCTGCTCGGCAGCCGCGACCGGCTGCTCGGCGTGTTCGTCGGCCTGTACGTG GTGATCGCCGCCTACCTCGCCTGCCACATCTTCGCGGGGCGCGCGGCCTACCTGATCGTCGGCGCGATGCTGGCGACCAT CATGTCGGCCAACGTGTTCTTCGTGATCATCCCCGGCCAGCGCAAGATGGTCGACACGATGCTCAAGGGCGGGACGCCCG ACCCGGTCTACGGCAGGTGCGGCAAGCAGCGTTCGGTCCACAACACCTATTTCACGCTGCCGGTCGTGTTCGCGATGCTG TCGAACCACTACGCGATGACGTACACCAACCGCTACAACTGGGTGGTGCTGGTGATCATCATGCTGGCCGGCGCGCTGAT CCGCCAGTTCTTCGTGATGCGCCACCGCGGTCAGCAGCGCTGGTATCTGCCGCTCGGCGGCGTGGCGCTGATGCTGCTCG CGCTGGTCTGGACCGCGCCGCGCCCGGTGGCGCCGCAGGCGCTGGCGGCGAACCGGCCGCAGCTCACGATCAGGGACATC CAGCCGGTGCTCGAACAGCGTTGCGTGGCCTGCCACGCGGCCAAGCCGACCATGATGGGCAGCGCGCCGGCCGGCGTGAT GTTCGACACCCCCGAGGAAATCGCGCAGAACGCCCAGCGCATCTATCAGCAGGCGGTACAACTGAAGGCGATGCCGATCG GCAACGTCACGCACATGACCGATGACGAGCGCAAGCAGCTCGCGGCCTGGTTCGAGGCCGGCGCGGCAAAATAG
Upstream 100 bases:
>100_bases GGTCGTACAGCACCTATCGCGGCAGCTGACAGCGTATCGGCCCGCCGCCCGTTTGCCGAGGACGCGACAACAACGCCCCG AGTCTGTCTGGAGAAGTGTC
Downstream 100 bases:
>100_bases GCGCTGCCTCGGCCGGCCCCGACGAACCTGACGAAACGGGCTCGCGTCACGCGAGCCCGTTTGCCTTGCCAGGCTGGCAT CGCGAGACGGGCACGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MEGFINDWLNLAIRWLHVIAAIAWIGESFYFVALDNSLTPPKDPNQRQRGVFGELWHVHGGGFYNMQKYTVAPPAMPEHL HWSKWPSYTTWMSGFGLFFVLYLLAPNTYLIDRNVLDMGPVVAVSAALGFLMAGWIVYDCACRLLGSRDRLLGVFVGLYV VIAAYLACHIFAGRAAYLIVGAMLATIMSANVFFVIIPGQRKMVDTMLKGGTPDPVYGRCGKQRSVHNTYFTLPVVFAML SNHYAMTYTNRYNWVVLVIIMLAGALIRQFFVMRHRGQQRWYLPLGGVALMLLALVWTAPRPVAPQALAANRPQLTIRDI QPVLEQRCVACHAAKPTMMGSAPAGVMFDTPEEIAQNAQRIYQQAVQLKAMPIGNVTHMTDDERKQLAAWFEAGAAK
Sequences:
>Translated_397_residues MEGFINDWLNLAIRWLHVIAAIAWIGESFYFVALDNSLTPPKDPNQRQRGVFGELWHVHGGGFYNMQKYTVAPPAMPEHL HWSKWPSYTTWMSGFGLFFVLYLLAPNTYLIDRNVLDMGPVVAVSAALGFLMAGWIVYDCACRLLGSRDRLLGVFVGLYV VIAAYLACHIFAGRAAYLIVGAMLATIMSANVFFVIIPGQRKMVDTMLKGGTPDPVYGRCGKQRSVHNTYFTLPVVFAML SNHYAMTYTNRYNWVVLVIIMLAGALIRQFFVMRHRGQQRWYLPLGGVALMLLALVWTAPRPVAPQALAANRPQLTIRDI QPVLEQRCVACHAAKPTMMGSAPAGVMFDTPEEIAQNAQRIYQQAVQLKAMPIGNVTHMTDDERKQLAAWFEAGAAK >Mature_397_residues MEGFINDWLNLAIRWLHVIAAIAWIGESFYFVALDNSLTPPKDPNQRQRGVFGELWHVHGGGFYNMQKYTVAPPAMPEHL HWSKWPSYTTWMSGFGLFFVLYLLAPNTYLIDRNVLDMGPVVAVSAALGFLMAGWIVYDCACRLLGSRDRLLGVFVGLYV VIAAYLACHIFAGRAAYLIVGAMLATIMSANVFFVIIPGQRKMVDTMLKGGTPDPVYGRCGKQRSVHNTYFTLPVVFAML SNHYAMTYTNRYNWVVLVIIMLAGALIRQFFVMRHRGQQRWYLPLGGVALMLLALVWTAPRPVAPQALAANRPQLTIRDI QPVLEQRCVACHAAKPTMMGSAPAGVMFDTPEEIAQNAQRIYQQAVQLKAMPIGNVTHMTDDERKQLAAWFEAGAAK
Specific function: Unknown
COG id: COG3748
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44405; Mature: 44405
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGFINDWLNLAIRWLHVIAAIAWIGESFYFVALDNSLTPPKDPNQRQRGVFGELWHVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCHHHHHHEECC GGFYNMQKYTVAPPAMPEHLHWSKWPSYTTWMSGFGLFFVLYLLAPNTYLIDRNVLDMGP CCEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH VVAVSAALGFLMAGWIVYDCACRLLGSRDRLLGVFVGLYVVIAAYLACHIFAGRAAYLIV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH GAMLATIMSANVFFVIIPGQRKMVDTMLKGGTPDPVYGRCGKQRSVHNTYFTLPVVFAML HHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SNHYAMTYTNRYNWVVLVIIMLAGALIRQFFVMRHRGQQRWYLPLGGVALMLLALVWTAP HCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCC RPVAPQALAANRPQLTIRDIQPVLEQRCVACHAAKPTMMGSAPAGVMFDTPEEIAQNAQR CCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHH IYQQAVQLKAMPIGNVTHMTDDERKQLAAWFEAGAAK HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MEGFINDWLNLAIRWLHVIAAIAWIGESFYFVALDNSLTPPKDPNQRQRGVFGELWHVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCHHHHHHEECC GGFYNMQKYTVAPPAMPEHLHWSKWPSYTTWMSGFGLFFVLYLLAPNTYLIDRNVLDMGP CCEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH VVAVSAALGFLMAGWIVYDCACRLLGSRDRLLGVFVGLYVVIAAYLACHIFAGRAAYLIV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH GAMLATIMSANVFFVIIPGQRKMVDTMLKGGTPDPVYGRCGKQRSVHNTYFTLPVVFAML HHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SNHYAMTYTNRYNWVVLVIIMLAGALIRQFFVMRHRGQQRWYLPLGGVALMLLALVWTAP HCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCC RPVAPQALAANRPQLTIRDIQPVLEQRCVACHAAKPTMMGSAPAGVMFDTPEEIAQNAQR CCCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHH IYQQAVQLKAMPIGNVTHMTDDERKQLAAWFEAGAAK HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA