| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is fabZ [H]
Identifier: 238026914
GI number: 238026914
Start: 1407302
End: 1407811
Strand: Direct
Name: fabZ [H]
Synonym: bglu_1g12840
Alternate gene names: 238026914
Gene position: 1407302-1407811 (Clockwise)
Preceding gene: 238026913
Following gene: 238026915
Centisome position: 36.02
GC content: 61.37
Gene sequence:
>510_bases TTGCAGTTACCACCGCGCAGCGATTGCGTGAGACGAACCACCATGAACACCGAACAAATCAACTTCGACATTCACAAGAT CCTCACGCTGCTGCCGCACCGTTACCCGTTCCTGCTCGTCGATCGCGTGCTCGAACTCACGCCGCACGAAAGCATCAAAG CGCTGAAGAACGTCACGATCAACGAGCCGTTCTTCACCGGCCACTTTCCGCAGCGCCCGGTGATGCCGGGCGTGCTGATC ATCGAGGCGCTGGCGCAGGCCGCCGCGTTGCTCACGTTCTCCGAGGAAGAGCCGAAGAATCCCGGCAACACGCTGTACTA CTTCGTCGGTATCGACGGCGCGCGTTTCAAGCGCGTGGTCGAGCCGGGCGACCAGCTGATCCTCAACGTGAAGTTCGAGC GCTATATTCGCGGCATCTGGAAGTTCAAGGCCACGGCCCAGGTCGAAGGCAAGGTGGCAGCCGAGGCCGAGCTGATGTGC ACGGTGAAGTCGGCCGACGCCGCTCCCTGA
Upstream 100 bases:
>100_bases CGCGGGCCCCGCGCAGGACTGAGCGTCGCCAGGGCGCGGCGGCGCGGCCGGACCGGCCGCCGCGATCACGAGGGCCGCTC GGCGCGGCCCGTACCAGCAT
Downstream 100 bases:
>100_bases GCGGGGCACGGCATTTCCGACTCCGCACTGACTACTGAGAGGCAACCGCGCATGACCAGGATTCATCCCACGGCGATCAT CGAGCCGGGCGCGCAGATCG
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: trans-Delta2-enoyl-acyl-ACP; H2O [C]
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MQLPPRSDCVRRTTMNTEQINFDIHKILTLLPHRYPFLLVDRVLELTPHESIKALKNVTINEPFFTGHFPQRPVMPGVLI IEALAQAAALLTFSEEEPKNPGNTLYYFVGIDGARFKRVVEPGDQLILNVKFERYIRGIWKFKATAQVEGKVAAEAELMC TVKSADAAP
Sequences:
>Translated_169_residues MQLPPRSDCVRRTTMNTEQINFDIHKILTLLPHRYPFLLVDRVLELTPHESIKALKNVTINEPFFTGHFPQRPVMPGVLI IEALAQAAALLTFSEEEPKNPGNTLYYFVGIDGARFKRVVEPGDQLILNVKFERYIRGIWKFKATAQVEGKVAAEAELMC TVKSADAAP >Mature_169_residues MQLPPRSDCVRRTTMNTEQINFDIHKILTLLPHRYPFLLVDRVLELTPHESIKALKNVTINEPFFTGHFPQRPVMPGVLI IEALAQAAALLTFSEEEPKNPGNTLYYFVGIDGARFKRVVEPGDQLILNVKFERYIRGIWKFKATAQVEGKVAAEAELMC TVKSADAAP
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=146, Percent_Identity=55.4794520547945, Blast_Score=168, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.- [C]
Molecular weight: Translated: 19091; Mature: 19091
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPPRSDCVRRTTMNTEQINFDIHKILTLLPHRYPFLLVDRVLELTPHESIKALKNVTI CCCCCCCHHHHHHCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCCC NEPFFTGHFPQRPVMPGVLIIEALAQAAALLTFSEEEPKNPGNTLYYFVGIDGARFKRVV CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEECCHHHHHHHC EPGDQLILNVKFERYIRGIWKFKATAQVEGKVAAEAELMCTVKSADAAP CCCCEEEEEEEHHHHHHHHHHHCCEEEECCCEECCEEEEEEECCCCCCC >Mature Secondary Structure MQLPPRSDCVRRTTMNTEQINFDIHKILTLLPHRYPFLLVDRVLELTPHESIKALKNVTI CCCCCCCHHHHHHCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCCC NEPFFTGHFPQRPVMPGVLIIEALAQAAALLTFSEEEPKNPGNTLYYFVGIDGARFKRVV CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEECCHHHHHHHC EPGDQLILNVKFERYIRGIWKFKATAQVEGKVAAEAELMCTVKSADAAP CCCCEEEEEEEHHHHHHHHHHHCCEEEECCCEECCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-3-hydroxy-acyl-ACP [C]
Specific reaction: D-3-hydroxy-acyl-ACP = trans-Delta2-enoyl-acyl-ACP + H2O [C]
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA