| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is lplT [H]
Identifier: 238026882
GI number: 238026882
Start: 1367406
End: 1368713
Strand: Reverse
Name: lplT [H]
Synonym: bglu_1g12500
Alternate gene names: 238026882
Gene position: 1368713-1367406 (Counterclockwise)
Preceding gene: 238026886
Following gene: 238026881
Centisome position: 35.04
GC content: 65.6
Gene sequence:
>1308_bases ATGAAAAAAGGTTTTTACTCCATCATGGCCGCGCAGTTTTTCTCTTCGCTGGCCGACAGTGCGCTTCTCATCGCCGCCAT CGCCCTGCTGAAAGATCTGCACGCGCCGAACTGGATGATTCCGCTGCTCAAGCTGTTCTTCGTCCTGTCCTATGTCGTGC TGGCCGCTTTCGTGGGTGCCTTCGCCGATTCGCGTCCGAAGGGACGCGTGATGTTCATCACCAACTCGATCAAGGTGATC GGCTGCCTGATCATGCTGCTCGGCGCGCATCCGCTGCTCGCCTACGGCATCGTCGGCTTCGGCGCGGCCGCCTATTCGCC CGCCAAGTACGGCATCCTCACCGAGCTGCTGCCCCCCGACCGGCTGGTGGCCGCCAACGGCTGGATCGAGGGCACCACGG TCGGCTCGATCATCCTCGGCACGGTGCTCGGCGGCGCGCTGATCAGCCCGCACCTGGCCTCGCACGTCATCAGGTACACC CCGCCCTGGATCAACACGCCGGCCGAGGCCGCGATGCTCGTGATCATGGCGATCTACGTCTTGGCGGCGCTGTTCAACCT GCGCATCCCCGACACCGGCGCGCGCTACCCGCGCCAGCAGCACGGCGTGCTGCGCCTCGTCACCGATTTCGCCGATTGTT TCGTGGTGCTGTGGCGCGACAAGCTCGGGCAGATCTCGCTGGCCGTCACCACGCTGTTCTGGGGCGCCGGCGCGACGCTG CAGTTCATCGTGCTGAAGTGGGCCGAGGTGTCGCTCGGCATGTCGCTGTCCGAGGGCGCGATCCTGCAGGCCGTGGTCGC GCTCGGCGTGGCCGGCGGCGCGATGGCCGCGGCCAGCCGGATTCCGCTCAAGAAATCGCTGAAGGTGCTGCCGGTCGGCA TCATGATGGGCATCGCCGTGATGCTGATGGCGTTCTACACGCGCGACCTGCTGCCCGCCAAATGGGTGCTGCACGTCTGG CACGTCCGGATCCCCTTCTACCTGGTGGTCGCCTACGTGTTCCTGATGATCGTCGGCGCGCTGTCCGGCTTCTTCGTGGT GCCGATGAACGCGCTGCTGCAGCACCGCGGCCACGTGCTGCTGTCGGCCGGCCACTCGATCGCGGTGCAGAACTTCAACG AGAACCTGTCGGTGCTCGTGATGCTGTGCCTCTATGCGATGCTGGTCTGGCTCGACGTGCCGGTGGGCATCGTGATCGTG CTGTTCGGCACCTTCGTGTGCCTGACGATGTGGCTCGTGATGCGCCGCCACCTCGCCAACCAGCGGCAGTTCGACTCCGT CGCGCTGATCGGCGAGAGCCGCCACTGA
Upstream 100 bases:
>100_bases TTTCATGATATAAAGCCGTGCGCACAACCTATTTTGCACGGGATCAGTCCGATTGCACGGCCCCTGCGGCCGAGCCGCAG CGAGGAAAGCATCGCTTCAG
Downstream 100 bases:
>100_bases GGCGCGGCACCCAGCCCCGGCCGGGCGGCGAGACCGCCCGCGGGGCCGTCCCGATCTGCCGCAGTCCGGCTCGATCGGCC CGTCCGGACGCCGTCCGGCC
Product: lysophospholipid transporter LplT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKKGFYSIMAAQFFSSLADSALLIAAIALLKDLHAPNWMIPLLKLFFVLSYVVLAAFVGAFADSRPKGRVMFITNSIKVI GCLIMLLGAHPLLAYGIVGFGAAAYSPAKYGILTELLPPDRLVAANGWIEGTTVGSIILGTVLGGALISPHLASHVIRYT PPWINTPAEAAMLVIMAIYVLAALFNLRIPDTGARYPRQQHGVLRLVTDFADCFVVLWRDKLGQISLAVTTLFWGAGATL QFIVLKWAEVSLGMSLSEGAILQAVVALGVAGGAMAAASRIPLKKSLKVLPVGIMMGIAVMLMAFYTRDLLPAKWVLHVW HVRIPFYLVVAYVFLMIVGALSGFFVVPMNALLQHRGHVLLSAGHSIAVQNFNENLSVLVMLCLYAMLVWLDVPVGIVIV LFGTFVCLTMWLVMRRHLANQRQFDSVALIGESRH
Sequences:
>Translated_435_residues MKKGFYSIMAAQFFSSLADSALLIAAIALLKDLHAPNWMIPLLKLFFVLSYVVLAAFVGAFADSRPKGRVMFITNSIKVI GCLIMLLGAHPLLAYGIVGFGAAAYSPAKYGILTELLPPDRLVAANGWIEGTTVGSIILGTVLGGALISPHLASHVIRYT PPWINTPAEAAMLVIMAIYVLAALFNLRIPDTGARYPRQQHGVLRLVTDFADCFVVLWRDKLGQISLAVTTLFWGAGATL QFIVLKWAEVSLGMSLSEGAILQAVVALGVAGGAMAAASRIPLKKSLKVLPVGIMMGIAVMLMAFYTRDLLPAKWVLHVW HVRIPFYLVVAYVFLMIVGALSGFFVVPMNALLQHRGHVLLSAGHSIAVQNFNENLSVLVMLCLYAMLVWLDVPVGIVIV LFGTFVCLTMWLVMRRHLANQRQFDSVALIGESRH >Mature_435_residues MKKGFYSIMAAQFFSSLADSALLIAAIALLKDLHAPNWMIPLLKLFFVLSYVVLAAFVGAFADSRPKGRVMFITNSIKVI GCLIMLLGAHPLLAYGIVGFGAAAYSPAKYGILTELLPPDRLVAANGWIEGTTVGSIILGTVLGGALISPHLASHVIRYT PPWINTPAEAAMLVIMAIYVLAALFNLRIPDTGARYPRQQHGVLRLVTDFADCFVVLWRDKLGQISLAVTTLFWGAGATL QFIVLKWAEVSLGMSLSEGAILQAVVALGVAGGAMAAASRIPLKKSLKVLPVGIMMGIAVMLMAFYTRDLLPAKWVLHVW HVRIPFYLVVAYVFLMIVGALSGFFVVPMNALLQHRGHVLLSAGHSIAVQNFNENLSVLVMLCLYAMLVWLDVPVGIVIV LFGTFVCLTMWLVMRRHLANQRQFDSVALIGESRH
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=420, Percent_Identity=38.5714285714286, Blast_Score=255, Evalue=4e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47283; Mature: 47283
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGFYSIMAAQFFSSLADSALLIAAIALLKDLHAPNWMIPLLKLFFVLSYVVLAAFVGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH FADSRPKGRVMFITNSIKVIGCLIMLLGAHPLLAYGIVGFGAAAYSPAKYGILTELLPPD HHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHCCCCC RLVAANGWIEGTTVGSIILGTVLGGALISPHLASHVIRYTPPWINTPAEAAMLVIMAIYV CEEEECCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LAALFNLRIPDTGARYPRQQHGVLRLVTDFADCFVVLWRDKLGQISLAVTTLFWGAGATL HHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH QFIVLKWAEVSLGMSLSEGAILQAVVALGVAGGAMAAASRIPLKKSLKVLPVGIMMGIAV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHCHHHHHHHHHHHHHH MLMAFYTRDLLPAKWVLHVWHVRIPFYLVVAYVFLMIVGALSGFFVVPMNALLQHRGHVL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE LSAGHSIAVQNFNENLSVLVMLCLYAMLVWLDVPVGIVIVLFGTFVCLTMWLVMRRHLAN EECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QRQFDSVALIGESRH CCCCCCEEECCCCCC >Mature Secondary Structure MKKGFYSIMAAQFFSSLADSALLIAAIALLKDLHAPNWMIPLLKLFFVLSYVVLAAFVGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH FADSRPKGRVMFITNSIKVIGCLIMLLGAHPLLAYGIVGFGAAAYSPAKYGILTELLPPD HHCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHCCCCC RLVAANGWIEGTTVGSIILGTVLGGALISPHLASHVIRYTPPWINTPAEAAMLVIMAIYV CEEEECCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LAALFNLRIPDTGARYPRQQHGVLRLVTDFADCFVVLWRDKLGQISLAVTTLFWGAGATL HHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH QFIVLKWAEVSLGMSLSEGAILQAVVALGVAGGAMAAASRIPLKKSLKVLPVGIMMGIAV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHCHHHHHHHHHHHHHH MLMAFYTRDLLPAKWVLHVWHVRIPFYLVVAYVFLMIVGALSGFFVVPMNALLQHRGHVL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE LSAGHSIAVQNFNENLSVLVMLCLYAMLVWLDVPVGIVIVLFGTFVCLTMWLVMRRHLAN EECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QRQFDSVALIGESRH CCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA