| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026837
Identifier: 238026837
GI number: 238026837
Start: 1313126
End: 1313713
Strand: Direct
Name: 238026837
Synonym: bglu_1g11980
Alternate gene names: NA
Gene position: 1313126-1313713 (Clockwise)
Preceding gene: 238026833
Following gene: 238026840
Centisome position: 33.61
GC content: 62.59
Gene sequence:
>588_bases ATGATTGACGTCATCGAACGGGCCGGGGTGGCGATGAATGCCCGAGGGCAGTTCAGCGATTCGACTGCCGATCCGAAAGT TACTTTGGGCGCGTTGGCCTTTGCGAACGAGCTGGGTCGATTGCTGGTTCGCATCAAGGCGGGACAGCAGGCGACGCCCG CGATGCTGCGGCGAGCGACGTTGCTCGTCGCTCAGATGATGCGAACGACGAGGCGCTTTCGTCGCGGTAAGTTCACGGGC CTGACGCGTGACGAACGGCGCGAGCTACGCGCAGTACATTGTGTCGAGCGCGCGAACGCTGACATCATCGAACGCTTCGC CCGGCGATTGATCGACGAATGGACCAATGACCGGTGCCGGAATTGTGAAGGCCAAGGCGTCGTCCGCCGAGCAGGGCGAT GCATTTGCCCTGAGTGTGGCGGATCGGGCCGACGTCCCATCGACGATGCTGCGCGTGCCCAGGCGCTCGGCCTGCCGCTC GTCGAATATCGGCGCAATTGGTCATGGCGTTTCCATGACATGCTGGCGCTGCTCGATAACGCGTTCTCGTCGGTGTGCGA CACAATGCGTCAGCAGCTGCGGGCTTGA
Upstream 100 bases:
>100_bases GTGCCCGCGACATGCGCGACATGGGGGCATGTCGCGCGAGCACACACTCATTTTTTTGTTCTTACCGATATGGGACGGCG GGACGACAAGGAGAAATGAA
Downstream 100 bases:
>100_bases AGCACATTCCATATCAAGAGTGGATCGCTTACACTGCGTCTATCCTTTGCTGCGTGACTGGATATCGATTTGTGAGCGAC CGTACACTCGTGTCGCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MIDVIERAGVAMNARGQFSDSTADPKVTLGALAFANELGRLLVRIKAGQQATPAMLRRATLLVAQMMRTTRRFRRGKFTG LTRDERRELRAVHCVERANADIIERFARRLIDEWTNDRCRNCEGQGVVRRAGRCICPECGGSGRRPIDDAARAQALGLPL VEYRRNWSWRFHDMLALLDNAFSSVCDTMRQQLRA
Sequences:
>Translated_195_residues MIDVIERAGVAMNARGQFSDSTADPKVTLGALAFANELGRLLVRIKAGQQATPAMLRRATLLVAQMMRTTRRFRRGKFTG LTRDERRELRAVHCVERANADIIERFARRLIDEWTNDRCRNCEGQGVVRRAGRCICPECGGSGRRPIDDAARAQALGLPL VEYRRNWSWRFHDMLALLDNAFSSVCDTMRQQLRA >Mature_195_residues MIDVIERAGVAMNARGQFSDSTADPKVTLGALAFANELGRLLVRIKAGQQATPAMLRRATLLVAQMMRTTRRFRRGKFTG LTRDERRELRAVHCVERANADIIERFARRLIDEWTNDRCRNCEGQGVVRRAGRCICPECGGSGRRPIDDAARAQALGLPL VEYRRNWSWRFHDMLALLDNAFSSVCDTMRQQLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22120; Mature: 22120
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDVIERAGVAMNARGQFSDSTADPKVTLGALAFANELGRLLVRIKAGQQATPAMLRRAT CCCCHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LLVAQMMRTTRRFRRGKFTGLTRDERRELRAVHCVERANADIIERFARRLIDEWTNDRCR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHC NCEGQGVVRRAGRCICPECGGSGRRPIDDAARAQALGLPLVEYRRNWSWRFHDMLALLDN CCCCCHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH AFSSVCDTMRQQLRA HHHHHHHHHHHHHCC >Mature Secondary Structure MIDVIERAGVAMNARGQFSDSTADPKVTLGALAFANELGRLLVRIKAGQQATPAMLRRAT CCCCHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LLVAQMMRTTRRFRRGKFTGLTRDERRELRAVHCVERANADIIERFARRLIDEWTNDRCR HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHC NCEGQGVVRRAGRCICPECGGSGRRPIDDAARAQALGLPLVEYRRNWSWRFHDMLALLDN CCCCCHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH AFSSVCDTMRQQLRA HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA