| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026804
Identifier: 238026804
GI number: 238026804
Start: 1275210
End: 1276082
Strand: Direct
Name: 238026804
Synonym: bglu_1g11620
Alternate gene names: NA
Gene position: 1275210-1276082 (Clockwise)
Preceding gene: 238026803
Following gene: 238026806
Centisome position: 32.64
GC content: 74.91
Gene sequence:
>873_bases ATGCAACGACGCCATCCGAATCGCTCGCGTGAGATGCGCGGGCCGGCCGACTGGCAGGAGCGCAACGAACGCGCATACTG GGGCAGCGACGAGAACGACCTGCCGCATTACGACGACATGCTGCTGCCCGACGACGAACGCGAGACCGATCCGCACGACG CGCGCGAACCGCGCGCCGCCGAGCGCATCGACGAGCGCCGGTGGCGCGACGAGCCACCGGCCGGCGGCGGGGCACGTGCC TACGGCGCGGCTCCCGGCCATGCTCCCGGCCATGCTCCCGGCCATGCCGCGCCGAGATGGGCGCACGGCAGCGAGCCCTA CGACGCGGGCGGCGCGCGGCGCCGCAGCGAACCGTATTATCCGCACCAGCGCAGCCAAGGCGGCCACGGCGCGCCGTCCC GGACACGCTACGACCCGCCCGGGCATCCGGCGCGTGAGGCCGCCCGCACCGCGCGCACCGCGCCGCGGCTGCGCGGGCCG AAGGGCTATACGCGCTCGGACGAGCGGATTCGCGAGGACGTCTGCGAGCGGCTCGCCTATGCGATCGACATCGACGTCAG CGAGGTCAGCGTGACGGTGAAGGACGCCTGCGTGCAACTCGAGGGCACCGTGCCGGAGCGTTGGATGAAGCACGAGATCG AGGATCTGGCCGACAGCTGCGTGTGGGTGCGCGACGTCGACAATCGCGTGCGGGTGGCACGTGCCGCGTCCGGCGACGCG CCCTATCCGGTGCCGCGCGCCGAAGCGCAGCCGACGCTGCCGCCCCCGTTGCCGTCGTCGGCAGCCGCCCATCCGTGCGG CGCGCTCGGACCGGGCGAGGCCGAGCCGCCGGCGGGGCCGGCCGGCCCCGCAGCGGACCCGCCGCGGCGCTGA
Upstream 100 bases:
>100_bases TTTTGAGGACAACAAGGCAAGTGAACCGGGAGCGTGGCCGGCCCGGGGCCGCATACGGCGTCGGGCCGCCCCTCCCACGA ACCGATCGAGGAGGCATGCG
Downstream 100 bases:
>100_bases CGACGGGCGGCGCGTGCCTAGCGGCGCGCGCCCTCGTCGAGCTCGGGCTGCATGCCGTGCTCGCGCATCAGCGCGAGCCG GTTGTAGAGCGTTTTCAGGC
Product: transport-associated protein
Products: NA
Alternate protein names: Osmotically Inducible Protein Y
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MQRRHPNRSREMRGPADWQERNERAYWGSDENDLPHYDDMLLPDDERETDPHDAREPRAAERIDERRWRDEPPAGGGARA YGAAPGHAPGHAPGHAAPRWAHGSEPYDAGGARRRSEPYYPHQRSQGGHGAPSRTRYDPPGHPAREAARTARTAPRLRGP KGYTRSDERIREDVCERLAYAIDIDVSEVSVTVKDACVQLEGTVPERWMKHEIEDLADSCVWVRDVDNRVRVARAASGDA PYPVPRAEAQPTLPPPLPSSAAAHPCGALGPGEAEPPAGPAGPAADPPRR
Sequences:
>Translated_290_residues MQRRHPNRSREMRGPADWQERNERAYWGSDENDLPHYDDMLLPDDERETDPHDAREPRAAERIDERRWRDEPPAGGGARA YGAAPGHAPGHAPGHAAPRWAHGSEPYDAGGARRRSEPYYPHQRSQGGHGAPSRTRYDPPGHPAREAARTARTAPRLRGP KGYTRSDERIREDVCERLAYAIDIDVSEVSVTVKDACVQLEGTVPERWMKHEIEDLADSCVWVRDVDNRVRVARAASGDA PYPVPRAEAQPTLPPPLPSSAAAHPCGALGPGEAEPPAGPAGPAADPPRR >Mature_290_residues MQRRHPNRSREMRGPADWQERNERAYWGSDENDLPHYDDMLLPDDERETDPHDAREPRAAERIDERRWRDEPPAGGGARA YGAAPGHAPGHAPGHAAPRWAHGSEPYDAGGARRRSEPYYPHQRSQGGHGAPSRTRYDPPGHPAREAARTARTAPRLRGP KGYTRSDERIREDVCERLAYAIDIDVSEVSVTVKDACVQLEGTVPERWMKHEIEDLADSCVWVRDVDNRVRVARAASGDA PYPVPRAEAQPTLPPPLPSSAAAHPCGALGPGEAEPPAGPAGPAADPPRR
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31941; Mature: 31941
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRHPNRSREMRGPADWQERNERAYWGSDENDLPHYDDMLLPDDERETDPHDAREPRAA CCCCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH ERIDERRWRDEPPAGGGARAYGAAPGHAPGHAPGHAAPRWAHGSEPYDAGGARRRSEPYY HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PHQRSQGGHGAPSRTRYDPPGHPAREAARTARTAPRLRGPKGYTRSDERIREDVCERLAY CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH AIDIDVSEVSVTVKDACVQLEGTVPERWMKHEIEDLADSCVWVRDVDNRVRVARAASGDA HHCCCHHHHEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCC PYPVPRAEAQPTLPPPLPSSAAAHPCGALGPGEAEPPAGPAGPAADPPRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQRRHPNRSREMRGPADWQERNERAYWGSDENDLPHYDDMLLPDDERETDPHDAREPRAA CCCCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH ERIDERRWRDEPPAGGGARAYGAAPGHAPGHAPGHAAPRWAHGSEPYDAGGARRRSEPYY HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PHQRSQGGHGAPSRTRYDPPGHPAREAARTARTAPRLRGPKGYTRSDERIREDVCERLAY CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH AIDIDVSEVSVTVKDACVQLEGTVPERWMKHEIEDLADSCVWVRDVDNRVRVARAASGDA HHCCCHHHHEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCC PYPVPRAEAQPTLPPPLPSSAAAHPCGALGPGEAEPPAGPAGPAADPPRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA