Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238026804

Identifier: 238026804

GI number: 238026804

Start: 1275210

End: 1276082

Strand: Direct

Name: 238026804

Synonym: bglu_1g11620

Alternate gene names: NA

Gene position: 1275210-1276082 (Clockwise)

Preceding gene: 238026803

Following gene: 238026806

Centisome position: 32.64

GC content: 74.91

Gene sequence:

>873_bases
ATGCAACGACGCCATCCGAATCGCTCGCGTGAGATGCGCGGGCCGGCCGACTGGCAGGAGCGCAACGAACGCGCATACTG
GGGCAGCGACGAGAACGACCTGCCGCATTACGACGACATGCTGCTGCCCGACGACGAACGCGAGACCGATCCGCACGACG
CGCGCGAACCGCGCGCCGCCGAGCGCATCGACGAGCGCCGGTGGCGCGACGAGCCACCGGCCGGCGGCGGGGCACGTGCC
TACGGCGCGGCTCCCGGCCATGCTCCCGGCCATGCTCCCGGCCATGCCGCGCCGAGATGGGCGCACGGCAGCGAGCCCTA
CGACGCGGGCGGCGCGCGGCGCCGCAGCGAACCGTATTATCCGCACCAGCGCAGCCAAGGCGGCCACGGCGCGCCGTCCC
GGACACGCTACGACCCGCCCGGGCATCCGGCGCGTGAGGCCGCCCGCACCGCGCGCACCGCGCCGCGGCTGCGCGGGCCG
AAGGGCTATACGCGCTCGGACGAGCGGATTCGCGAGGACGTCTGCGAGCGGCTCGCCTATGCGATCGACATCGACGTCAG
CGAGGTCAGCGTGACGGTGAAGGACGCCTGCGTGCAACTCGAGGGCACCGTGCCGGAGCGTTGGATGAAGCACGAGATCG
AGGATCTGGCCGACAGCTGCGTGTGGGTGCGCGACGTCGACAATCGCGTGCGGGTGGCACGTGCCGCGTCCGGCGACGCG
CCCTATCCGGTGCCGCGCGCCGAAGCGCAGCCGACGCTGCCGCCCCCGTTGCCGTCGTCGGCAGCCGCCCATCCGTGCGG
CGCGCTCGGACCGGGCGAGGCCGAGCCGCCGGCGGGGCCGGCCGGCCCCGCAGCGGACCCGCCGCGGCGCTGA

Upstream 100 bases:

>100_bases
TTTTGAGGACAACAAGGCAAGTGAACCGGGAGCGTGGCCGGCCCGGGGCCGCATACGGCGTCGGGCCGCCCCTCCCACGA
ACCGATCGAGGAGGCATGCG

Downstream 100 bases:

>100_bases
CGACGGGCGGCGCGTGCCTAGCGGCGCGCGCCCTCGTCGAGCTCGGGCTGCATGCCGTGCTCGCGCATCAGCGCGAGCCG
GTTGTAGAGCGTTTTCAGGC

Product: transport-associated protein

Products: NA

Alternate protein names: Osmotically Inducible Protein Y

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MQRRHPNRSREMRGPADWQERNERAYWGSDENDLPHYDDMLLPDDERETDPHDAREPRAAERIDERRWRDEPPAGGGARA
YGAAPGHAPGHAPGHAAPRWAHGSEPYDAGGARRRSEPYYPHQRSQGGHGAPSRTRYDPPGHPAREAARTARTAPRLRGP
KGYTRSDERIREDVCERLAYAIDIDVSEVSVTVKDACVQLEGTVPERWMKHEIEDLADSCVWVRDVDNRVRVARAASGDA
PYPVPRAEAQPTLPPPLPSSAAAHPCGALGPGEAEPPAGPAGPAADPPRR

Sequences:

>Translated_290_residues
MQRRHPNRSREMRGPADWQERNERAYWGSDENDLPHYDDMLLPDDERETDPHDAREPRAAERIDERRWRDEPPAGGGARA
YGAAPGHAPGHAPGHAAPRWAHGSEPYDAGGARRRSEPYYPHQRSQGGHGAPSRTRYDPPGHPAREAARTARTAPRLRGP
KGYTRSDERIREDVCERLAYAIDIDVSEVSVTVKDACVQLEGTVPERWMKHEIEDLADSCVWVRDVDNRVRVARAASGDA
PYPVPRAEAQPTLPPPLPSSAAAHPCGALGPGEAEPPAGPAGPAADPPRR
>Mature_290_residues
MQRRHPNRSREMRGPADWQERNERAYWGSDENDLPHYDDMLLPDDERETDPHDAREPRAAERIDERRWRDEPPAGGGARA
YGAAPGHAPGHAPGHAAPRWAHGSEPYDAGGARRRSEPYYPHQRSQGGHGAPSRTRYDPPGHPAREAARTARTAPRLRGP
KGYTRSDERIREDVCERLAYAIDIDVSEVSVTVKDACVQLEGTVPERWMKHEIEDLADSCVWVRDVDNRVRVARAASGDA
PYPVPRAEAQPTLPPPLPSSAAAHPCGALGPGEAEPPAGPAGPAADPPRR

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31941; Mature: 31941

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRHPNRSREMRGPADWQERNERAYWGSDENDLPHYDDMLLPDDERETDPHDAREPRAA
CCCCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
ERIDERRWRDEPPAGGGARAYGAAPGHAPGHAPGHAAPRWAHGSEPYDAGGARRRSEPYY
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PHQRSQGGHGAPSRTRYDPPGHPAREAARTARTAPRLRGPKGYTRSDERIREDVCERLAY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
AIDIDVSEVSVTVKDACVQLEGTVPERWMKHEIEDLADSCVWVRDVDNRVRVARAASGDA
HHCCCHHHHEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCC
PYPVPRAEAQPTLPPPLPSSAAAHPCGALGPGEAEPPAGPAGPAADPPRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRRHPNRSREMRGPADWQERNERAYWGSDENDLPHYDDMLLPDDERETDPHDAREPRAA
CCCCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
ERIDERRWRDEPPAGGGARAYGAAPGHAPGHAPGHAAPRWAHGSEPYDAGGARRRSEPYY
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PHQRSQGGHGAPSRTRYDPPGHPAREAARTARTAPRLRGPKGYTRSDERIREDVCERLAY
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
AIDIDVSEVSVTVKDACVQLEGTVPERWMKHEIEDLADSCVWVRDVDNRVRVARAASGDA
HHCCCHHHHEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCC
PYPVPRAEAQPTLPPPLPSSAAAHPCGALGPGEAEPPAGPAGPAADPPRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA