| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026781
Identifier: 238026781
GI number: 238026781
Start: 1250453
End: 1250941
Strand: Direct
Name: 238026781
Synonym: bglu_1g11390
Alternate gene names: NA
Gene position: 1250453-1250941 (Clockwise)
Preceding gene: 238026780
Following gene: 238026783
Centisome position: 32.01
GC content: 69.12
Gene sequence:
>489_bases ATGCCGATGCGCCGTGCCCCCCGGTTGTTCCGTTTGCTCGCGACCGTCTGGGTCGGCAGCCTGCTGACGATCGGCTACGC GGTCGCGCCGGTGCTGTTCGCGGTGCTCGATCGGGTTGCCGCGGGTGAGGTGGCCGCGCGGCTGTTCCGGATCGAGGGCT GGATCGCGGTGGTGTGCGGCGTGTTGATGCTGGTGACGGCGAATGCGCGCGTGCGCGGCGGCGATGCAGCATATCGCCGC CCTCGCTTGATCGTGGCCCTGATGCTGGCTTGCATGATCGTGGGGTATTTCGCGATCGAGCCGTTCATGAGCGCGCTGCG CCTGGCCGCGCAGGAGGCGGGCACCGATGTCGGCCATTCCGCCTACGCCGCCCGCTTCGGCATGCTGCACGGCGTGTCGA GCCTGTTCTATCTGATCGAAAGCCTGTGCGGCCTCTGGCTCGTGTGGATCCTGCCCGGGGCGGACGAGGTGCGCGCCACG CGCAGCTGA
Upstream 100 bases:
>100_bases TGATCGGCAAGTCGGAGGGCGACGTCGCGGCCGTCCAGGCGCCGAGCGGCGTGCGCGAGTACGAGATCATCTCGGTCAGC TATATCTGAAGCCCGGAGCG
Downstream 100 bases:
>100_bases GTGCGGCCGGCGCGTGCCCGCGAGGCGCCGGTGCCGGGCCGGGTTTCCTTATTTGTCGTTCTGGAACGGGCGCTTCGCGC TTTGCTGGCGCTTTTTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPMRRAPRLFRLLATVWVGSLLTIGYAVAPVLFAVLDRVAAGEVAARLFRIEGWIAVVCGVLMLVTANARVRGGDAAYRR PRLIVALMLACMIVGYFAIEPFMSALRLAAQEAGTDVGHSAYAARFGMLHGVSSLFYLIESLCGLWLVWILPGADEVRAT RS
Sequences:
>Translated_162_residues MPMRRAPRLFRLLATVWVGSLLTIGYAVAPVLFAVLDRVAAGEVAARLFRIEGWIAVVCGVLMLVTANARVRGGDAAYRR PRLIVALMLACMIVGYFAIEPFMSALRLAAQEAGTDVGHSAYAARFGMLHGVSSLFYLIESLCGLWLVWILPGADEVRAT RS >Mature_161_residues PMRRAPRLFRLLATVWVGSLLTIGYAVAPVLFAVLDRVAAGEVAARLFRIEGWIAVVCGVLMLVTANARVRGGDAAYRRP RLIVALMLACMIVGYFAIEPFMSALRLAAQEAGTDVGHSAYAARFGMLHGVSSLFYLIESLCGLWLVWILPGADEVRATR S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17611; Mature: 17480
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMRRAPRLFRLLATVWVGSLLTIGYAVAPVLFAVLDRVAAGEVAARLFRIEGWIAVVCG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLMLVTANARVRGGDAAYRRPRLIVALMLACMIVGYFAIEPFMSALRLAAQEAGTDVGHS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AYAARFGMLHGVSSLFYLIESLCGLWLVWILPGADEVRATRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure PMRRAPRLFRLLATVWVGSLLTIGYAVAPVLFAVLDRVAAGEVAARLFRIEGWIAVVCG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLMLVTANARVRGGDAAYRRPRLIVALMLACMIVGYFAIEPFMSALRLAAQEAGTDVGHS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AYAARFGMLHGVSSLFYLIESLCGLWLVWILPGADEVRATRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA