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The map label for this gene is 238026732

Identifier: 238026732

GI number: 238026732

Start: 1194578

End: 1197295

Strand: Direct

Name: 238026732

Synonym: bglu_1g10900

Alternate gene names: NA

Gene position: 1194578-1197295 (Clockwise)

Preceding gene: 238026731

Following gene: 238026733

Centisome position: 30.58

GC content: 74.61

Gene sequence:

>2718_bases
ATGACCGACACGCTCTCCGAGTATCAACGCAAGCGCCGCTTCGACGCGACGCCCGAGCCGGCCGGCGCGAAGCGGCGCGG
GGCGCCCGCGCGGCGTCGGGACGGCGCCGCCGCGCCGCTGCGTTTCGTCGTGCAGGTGCATCACGCGCGGCGTCTGCATT
ACGACTTCCGCCTCGAACTCGACGGCGTGCTCAAGTCGTGGGCCGTGCCGAAAGGCCCGAGCCCCGATCCGGCCGACAAG
CGGCTCGCCATTCAGGTCGAGGACCATCCGCTCGACTATGCGAGCTTCGAGGGCGAGATTCCGCCCGGCCACTACGGCGC
GGGCAGCGTGCGGATCGACGATGCCGGCGTCTGGCGCCCAGAAGGCGGCGTGGCGGGTGCCCGGCGCGGCTACCGCGACG
GCAAGCTCACGTTCGAACTCGACGGCGCGAAGCTGCGCGGGCGCTGGTCGCTGACCCGCACCGCGATGCCGGGCAGCCGT
GGCAAGTCCTCGTGGCTGCTCGTGAGAGCGCATGAGGACGCGGCCGGCAGCGAGCCGGCGGACCAAGCGGCCGACCAACT
GGTGGACCAGGCGGCAGCGCGGCGGCGCACGCGGCAGGGCCGGCCGGCCGCGAAGCCCGCGGCGAAGCGCCCGGCCAAGC
CCGCGGCCGCGCAGCCGGCCGCATCGGCCTCAGGCACCGCCACCGCGCTCCCCGGCGCCCGCCGCGCGGCCTTGCCGGAC
GCGCTCGCGCCGCAACTGGCGACGCTGGTCGCCGCGCCGCCCGAGGACGAGGGCTGGCGCTACGAGATGAAGTTCGACGG
CTACCGCGTGCTGATCCGCATCGCCGGCCGCGGCGGGCGCCGCTCGGTGCGCGTGCTGACGCGCGAAGGGCTCGACTGGA
GCGCGAAGTTCGGCGCGCAGTGCGCCGCGTTCGCCGCGTTGCCGGTCGACGATGCCTGGCTCGACGCCGAGGCCGTGGTG
CTGGACGCGCGCGGCGTGCCCGATTTCGCGGCACTGCAACGGGCGCTGTCGGACGGCGACGATGCGGCCATCGTCTGCTT
CGTGTTCGACCTGCTGCATCTGGACGGCCGCGCGCTGCAGGCGGTGCCGCTCGATGCGCGCCGCGCGCGGCTGGCCGCGC
TGCTGGCCGGCGCCGATTCCGGCTGCCTGCGCTTCTCGCCGACGCTCGACGGCGCGCCGGCGGCGCTGCTGGAGGCCGCC
GCGCGGGCCGGGCTCGAAGGCCTGATCGGCAAGCGCGCCGACGGCGCCTACCGCGCCGGACGCAGTCGCCAATGGATCAA
GCTCAAATGCCGGCAGCGCCAGGAATTCGTGATCGGCGGCTACAGCGCGCCGCGCGGCAGCCGCAGCCACTTCGGCGCGC
TGCTGCTCGGCGTCCACGCGGCGCCGCCGCGCTCGACGCGGCGCGGCGGCCAGGCCGCGCGCGAGCGGGCCTTGCAGTAT
GTCGGCCGGGTCGGGACCGGCTTCGATGCGCAGCAGCTCGCCGCGCTGGCGAAGCGGCTCGCCGCGCTCGAGCGCGAGCG
CGCGCCGTTCGCCGTGCCGCCGCCTTCGCGCGGCGACGCGGTGCGCTGGGTCGAGCCGAGGCTGGTCGCCGAGTGCGAGT
TCGCAGGCTGGACCCGTGACGGGCTGCTGCGGCAGGCCGCCTTCATCGCGCTGCGCGAGGACAAGCCGACCGCGCGCGTC
GTCAGGGAAACCGCCTTGCCTACGGCGGGGCGAACCACGGGAGGCAGCATGGATAGTAACGAAGCAGCCTCGGCCGGCCA
TGCCGCGCGCCGTCGTCGCGGCGGCGCGGACGAACCGGTCGAGGCAGGCCAGGCCAGGCCGGCCGGCGCGGCAAGCGTGG
CGGGAGTGCGCATCACGCATCCCGAGCGCGTCGTCGACGCGCAGGGCGGCTTTCGCAAGATCGACGTGGTGCGCTACTAC
GAGTCGGTGGCGCGCTGGCTGCTGCCGCAACTGAGCGGGCGGCCCGTGTCGCTGGTGCGCTATATGAAGGGCATCGGCGG
CGAATCGTTCTTCCAGAAGCACGCGGGCGCGCGCGGCATGGGCTTCGTCACGCGCCACCCGGGGCTCGATCCGGGCCACG
ACGCGCTGATGACGCTCGACGACACGGCCGCGCTGGTGGGCGCCGCGCAATTCGACGCCATCGAGTTTCACACCTGGAAC
GCGACGGTGGACCGGATCGAGCGGCCCGAGCGCCTGGTGTTCGATCTCGATCCCGATCCGGCGCTGCCGTGGGAGCGGAT
GATCGAGGCGGCCGGCCTAGTGCGCGCGCTGCTCGAGGCGCTGGGCCTGCCGGCGTTCTGCAAGACCAGCGGCGGCAAGG
GGCTGCATGTGGTGGTGCCGATCGTGCGGCATACCGAATGGGACGACGCGAAGGCGTTCTCGCAGGCGGTGGCGCGGCAT
CTGGCCGGGCAGCTGCCGGAGCGCTTCACCGCGAAGATGGGGCCGGAGAATCGCCGCGGCCTGATCTTCGTCGACTACCT
GCGCAACGGCCGCGGCGCGAGCACGGTGGCCGCCTATTCGGCGCGCGCGCGGCCCGGGATGGGCGTCTCGGTGCCGCTCG
CCTGGGAGGAGGTGGCGGCCACCACGGGCGGCGCGCAATGGACGATCGCGAACCTGTCGGCGCGGCTCGACGCGCAGCGG
GCCGACCCGTGGGACGGCTACGACGCCGCACGCACGCGCATCACGGCGGCGATGCGCAAGCGCCTCGGCGAGCGCTGA

Upstream 100 bases:

>100_bases
GCCGCGCAATCGGCCGCGCGCCGCAAGTCCAGCGGCCGGGCGGCGGGCCCGGCGCCGGCGTCGCGCAAGCGCGCCGCCTG
ATGCACGGGCAGCGACGACG

Downstream 100 bases:

>100_bases
GGGGCGCCTCGCGCGGAGCGGGCGCCGCAGCCGTGCGCCGGCTTTGTACAATGGAGGCGATCCGACCGCCTCCGCGCCGC
GCGGCGCCCGCCCGCCATGT

Product: DNA primase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 905; Mature: 904

Protein sequence:

>905_residues
MTDTLSEYQRKRRFDATPEPAGAKRRGAPARRRDGAAAPLRFVVQVHHARRLHYDFRLELDGVLKSWAVPKGPSPDPADK
RLAIQVEDHPLDYASFEGEIPPGHYGAGSVRIDDAGVWRPEGGVAGARRGYRDGKLTFELDGAKLRGRWSLTRTAMPGSR
GKSSWLLVRAHEDAAGSEPADQAADQLVDQAAARRRTRQGRPAAKPAAKRPAKPAAAQPAASASGTATALPGARRAALPD
ALAPQLATLVAAPPEDEGWRYEMKFDGYRVLIRIAGRGGRRSVRVLTREGLDWSAKFGAQCAAFAALPVDDAWLDAEAVV
LDARGVPDFAALQRALSDGDDAAIVCFVFDLLHLDGRALQAVPLDARRARLAALLAGADSGCLRFSPTLDGAPAALLEAA
ARAGLEGLIGKRADGAYRAGRSRQWIKLKCRQRQEFVIGGYSAPRGSRSHFGALLLGVHAAPPRSTRRGGQAARERALQY
VGRVGTGFDAQQLAALAKRLAALERERAPFAVPPPSRGDAVRWVEPRLVAECEFAGWTRDGLLRQAAFIALREDKPTARV
VRETALPTAGRTTGGSMDSNEAASAGHAARRRRGGADEPVEAGQARPAGAASVAGVRITHPERVVDAQGGFRKIDVVRYY
ESVARWLLPQLSGRPVSLVRYMKGIGGESFFQKHAGARGMGFVTRHPGLDPGHDALMTLDDTAALVGAAQFDAIEFHTWN
ATVDRIERPERLVFDLDPDPALPWERMIEAAGLVRALLEALGLPAFCKTSGGKGLHVVVPIVRHTEWDDAKAFSQAVARH
LAGQLPERFTAKMGPENRRGLIFVDYLRNGRGASTVAAYSARARPGMGVSVPLAWEEVAATTGGAQWTIANLSARLDAQR
ADPWDGYDAARTRITAAMRKRLGER

Sequences:

>Translated_905_residues
MTDTLSEYQRKRRFDATPEPAGAKRRGAPARRRDGAAAPLRFVVQVHHARRLHYDFRLELDGVLKSWAVPKGPSPDPADK
RLAIQVEDHPLDYASFEGEIPPGHYGAGSVRIDDAGVWRPEGGVAGARRGYRDGKLTFELDGAKLRGRWSLTRTAMPGSR
GKSSWLLVRAHEDAAGSEPADQAADQLVDQAAARRRTRQGRPAAKPAAKRPAKPAAAQPAASASGTATALPGARRAALPD
ALAPQLATLVAAPPEDEGWRYEMKFDGYRVLIRIAGRGGRRSVRVLTREGLDWSAKFGAQCAAFAALPVDDAWLDAEAVV
LDARGVPDFAALQRALSDGDDAAIVCFVFDLLHLDGRALQAVPLDARRARLAALLAGADSGCLRFSPTLDGAPAALLEAA
ARAGLEGLIGKRADGAYRAGRSRQWIKLKCRQRQEFVIGGYSAPRGSRSHFGALLLGVHAAPPRSTRRGGQAARERALQY
VGRVGTGFDAQQLAALAKRLAALERERAPFAVPPPSRGDAVRWVEPRLVAECEFAGWTRDGLLRQAAFIALREDKPTARV
VRETALPTAGRTTGGSMDSNEAASAGHAARRRRGGADEPVEAGQARPAGAASVAGVRITHPERVVDAQGGFRKIDVVRYY
ESVARWLLPQLSGRPVSLVRYMKGIGGESFFQKHAGARGMGFVTRHPGLDPGHDALMTLDDTAALVGAAQFDAIEFHTWN
ATVDRIERPERLVFDLDPDPALPWERMIEAAGLVRALLEALGLPAFCKTSGGKGLHVVVPIVRHTEWDDAKAFSQAVARH
LAGQLPERFTAKMGPENRRGLIFVDYLRNGRGASTVAAYSARARPGMGVSVPLAWEEVAATTGGAQWTIANLSARLDAQR
ADPWDGYDAARTRITAAMRKRLGER
>Mature_904_residues
TDTLSEYQRKRRFDATPEPAGAKRRGAPARRRDGAAAPLRFVVQVHHARRLHYDFRLELDGVLKSWAVPKGPSPDPADKR
LAIQVEDHPLDYASFEGEIPPGHYGAGSVRIDDAGVWRPEGGVAGARRGYRDGKLTFELDGAKLRGRWSLTRTAMPGSRG
KSSWLLVRAHEDAAGSEPADQAADQLVDQAAARRRTRQGRPAAKPAAKRPAKPAAAQPAASASGTATALPGARRAALPDA
LAPQLATLVAAPPEDEGWRYEMKFDGYRVLIRIAGRGGRRSVRVLTREGLDWSAKFGAQCAAFAALPVDDAWLDAEAVVL
DARGVPDFAALQRALSDGDDAAIVCFVFDLLHLDGRALQAVPLDARRARLAALLAGADSGCLRFSPTLDGAPAALLEAAA
RAGLEGLIGKRADGAYRAGRSRQWIKLKCRQRQEFVIGGYSAPRGSRSHFGALLLGVHAAPPRSTRRGGQAARERALQYV
GRVGTGFDAQQLAALAKRLAALERERAPFAVPPPSRGDAVRWVEPRLVAECEFAGWTRDGLLRQAAFIALREDKPTARVV
RETALPTAGRTTGGSMDSNEAASAGHAARRRRGGADEPVEAGQARPAGAASVAGVRITHPERVVDAQGGFRKIDVVRYYE
SVARWLLPQLSGRPVSLVRYMKGIGGESFFQKHAGARGMGFVTRHPGLDPGHDALMTLDDTAALVGAAQFDAIEFHTWNA
TVDRIERPERLVFDLDPDPALPWERMIEAAGLVRALLEALGLPAFCKTSGGKGLHVVVPIVRHTEWDDAKAFSQAVARHL
AGQLPERFTAKMGPENRRGLIFVDYLRNGRGASTVAAYSARARPGMGVSVPLAWEEVAATTGGAQWTIANLSARLDAQRA
DPWDGYDAARTRITAAMRKRLGER

Specific function: Unknown

COG id: COG1793

COG function: function code L; ATP-dependent DNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent DNA ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012309
- InterPro:   IPR012310
- InterPro:   IPR014146
- InterPro:   IPR002755
- InterPro:   IPR014144
- InterPro:   IPR014145
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF04679 DNA_ligase_A_C; PF01068 DNA_ligase_A_M; PF01896 DNA_primase_S [H]

EC number: NA

Molecular weight: Translated: 97421; Mature: 97290

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS50160 DNA_LIGASE_A3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTLSEYQRKRRFDATPEPAGAKRRGAPARRRDGAAAPLRFVVQVHHARRLHYDFRLEL
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCEEEEEEH
DGVLKSWAVPKGPSPDPADKRLAIQVEDHPLDYASFEGEIPPGHYGAGSVRIDDAGVWRP
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCC
EGGVAGARRGYRDGKLTFELDGAKLRGRWSLTRTAMPGSRGKSSWLLVRAHEDAAGSEPA
CCCCCCCCCCCCCCEEEEEECCCEECCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCH
DQAADQLVDQAAARRRTRQGRPAAKPAAKRPAKPAAAQPAASASGTATALPGARRAALPD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHCCCH
ALAPQLATLVAAPPEDEGWRYEMKFDGYRVLIRIAGRGGRRSVRVLTREGLDWSAKFGAQ
HHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEECCCCCCEEEEEEECCCCCCHHHCCC
CAAFAALPVDDAWLDAEAVVLDARGVPDFAALQRALSDGDDAAIVCFVFDLLHLDGRALQ
HHEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEE
AVPLDARRARLAALLAGADSGCLRFSPTLDGAPAALLEAAARAGLEGLIGKRADGAYRAG
ECCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHCHHHHHCCCCCCHHHCC
RSRQWIKLKCRQRQEFVIGGYSAPRGSRSHFGALLLGVHAAPPRSTRRGGQAARERALQY
CCCCEEEEEECCCCEEEEECCCCCCCCCHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHH
VGRVGTGFDAQQLAALAKRLAALERERAPFAVPPPSRGDAVRWVEPRLVAECEFAGWTRD
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCHH
GLLRQAAFIALREDKPTARVVRETALPTAGRTTGGSMDSNEAASAGHAARRRRGGADEPV
HHHHHHHEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
EAGQARPAGAASVAGVRITHPERVVDAQGGFRKIDVVRYYESVARWLLPQLSGRPVSLVR
HCCCCCCCCCCCCCCEEEECCHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHH
YMKGIGGESFFQKHAGARGMGFVTRHPGLDPGHDALMTLDDTAALVGAAQFDAIEFHTWN
HHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHCCEEEEEECC
ATVDRIERPERLVFDLDPDPALPWERMIEAAGLVRALLEALGLPAFCKTSGGKGLHVVVP
CHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEE
IVRHTEWDDAKAFSQAVARHLAGQLPERFTAKMGPENRRGLIFVDYLRNGRGASTVAAYS
EECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHH
ARARPGMGVSVPLAWEEVAATTGGAQWTIANLSARLDAQRADPWDGYDAARTRITAAMRK
HCCCCCCCEECCCCHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
RLGER
HHCCC
>Mature Secondary Structure 
TDTLSEYQRKRRFDATPEPAGAKRRGAPARRRDGAAAPLRFVVQVHHARRLHYDFRLEL
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCEEEEEEH
DGVLKSWAVPKGPSPDPADKRLAIQVEDHPLDYASFEGEIPPGHYGAGSVRIDDAGVWRP
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCC
EGGVAGARRGYRDGKLTFELDGAKLRGRWSLTRTAMPGSRGKSSWLLVRAHEDAAGSEPA
CCCCCCCCCCCCCCEEEEEECCCEECCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCH
DQAADQLVDQAAARRRTRQGRPAAKPAAKRPAKPAAAQPAASASGTATALPGARRAALPD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHCCCH
ALAPQLATLVAAPPEDEGWRYEMKFDGYRVLIRIAGRGGRRSVRVLTREGLDWSAKFGAQ
HHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEECCCCCCEEEEEEECCCCCCHHHCCC
CAAFAALPVDDAWLDAEAVVLDARGVPDFAALQRALSDGDDAAIVCFVFDLLHLDGRALQ
HHEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEE
AVPLDARRARLAALLAGADSGCLRFSPTLDGAPAALLEAAARAGLEGLIGKRADGAYRAG
ECCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHCHHHHHCCCCCCHHHCC
RSRQWIKLKCRQRQEFVIGGYSAPRGSRSHFGALLLGVHAAPPRSTRRGGQAARERALQY
CCCCEEEEEECCCCEEEEECCCCCCCCCHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHH
VGRVGTGFDAQQLAALAKRLAALERERAPFAVPPPSRGDAVRWVEPRLVAECEFAGWTRD
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCHH
GLLRQAAFIALREDKPTARVVRETALPTAGRTTGGSMDSNEAASAGHAARRRRGGADEPV
HHHHHHHEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
EAGQARPAGAASVAGVRITHPERVVDAQGGFRKIDVVRYYESVARWLLPQLSGRPVSLVR
HCCCCCCCCCCCCCCEEEECCHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHH
YMKGIGGESFFQKHAGARGMGFVTRHPGLDPGHDALMTLDDTAALVGAAQFDAIEFHTWN
HHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHCCEEEEEECC
ATVDRIERPERLVFDLDPDPALPWERMIEAAGLVRALLEALGLPAFCKTSGGKGLHVVVP
CHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEE
IVRHTEWDDAKAFSQAVARHLAGQLPERFTAKMGPENRRGLIFVDYLRNGRGASTVAAYS
EECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHH
ARARPGMGVSVPLAWEEVAATTGGAQWTIANLSARLDAQRADPWDGYDAARTRITAAMRK
HCCCCCCCEECCCCHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
RLGER
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]