| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026674
Identifier: 238026674
GI number: 238026674
Start: 1115118
End: 1115636
Strand: Direct
Name: 238026674
Synonym: bglu_1g10280
Alternate gene names: NA
Gene position: 1115118-1115636 (Clockwise)
Preceding gene: 238026666
Following gene: 238026675
Centisome position: 28.55
GC content: 73.41
Gene sequence:
>519_bases ATGAATGCGGCGCCGGCCCGCGCGCATCGTATTATTGTGATTCCTGCATCAAGAGCGCGCGCGAGCGCGCATATCGCCAT GACGTCTTCCTTCCGTTTCGCGCCGCGCCGCGCGCCGTCGTACCGGTTCGCCGCCGTCGCCATGCTGGCCACGCTGGCCC TGGCCGGCTGCGACAAGTCCGATTCGAACGCCACGGCGCCCGACCACGCGGCGAGCGCCGTCGCCAAGGCCGCCGCGCAG GCCGCGAACCAGCTCGACCGGGCCGCCAGCTTCGTCGACAGCCAGATCGCCGCCGCCAAGGCCGGCGTGGCCTCGGCCGC CTCGGCCGTGCCGCCCGTTTCGGCCAGCGATGTGGCCTCGGCCGCGCAGGCGCACCTGAAAAACGCCGCCACGGCGGCGT TCGGCCTGGCCGCCTCGGCGGCCGGCTCGCGCCTCGAGACGGCGGGGCGCAAGCTGCAGCAATGGAGCCGCGAGACTGCC GCGTCCTCGCCCGACGCCGAGAAATCGGCGAACCGCTGA
Upstream 100 bases:
>100_bases TGCGGAATTGCCGTCGGATGGTGCGCGGCGGGTGGCGCCGCCGCGCCGCCGCGTGCGATACGCGCGCTTCCGACCCGCGT GGCGCTCGATACCGGGCCAC
Downstream 100 bases:
>100_bases GCGAGGCTTGCCCTTGGGACTAAATGTAACTAATATGAGCACACTTTCTCGCCGAACGGCCCGTCCGGCTGCGCGGTTGG TTGAGCGGCCGGGCCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNAAPARAHRIIVIPASRARASAHIAMTSSFRFAPRRAPSYRFAAVAMLATLALAGCDKSDSNATAPDHAASAVAKAAAQ AANQLDRAASFVDSQIAAAKAGVASAASAVPPVSASDVASAAQAHLKNAATAAFGLAASAAGSRLETAGRKLQQWSRETA ASSPDAEKSANR
Sequences:
>Translated_172_residues MNAAPARAHRIIVIPASRARASAHIAMTSSFRFAPRRAPSYRFAAVAMLATLALAGCDKSDSNATAPDHAASAVAKAAAQ AANQLDRAASFVDSQIAAAKAGVASAASAVPPVSASDVASAAQAHLKNAATAAFGLAASAAGSRLETAGRKLQQWSRETA ASSPDAEKSANR >Mature_172_residues MNAAPARAHRIIVIPASRARASAHIAMTSSFRFAPRRAPSYRFAAVAMLATLALAGCDKSDSNATAPDHAASAVAKAAAQ AANQLDRAASFVDSQIAAAKAGVASAASAVPPVSASDVASAAQAHLKNAATAAFGLAASAAGSRLETAGRKLQQWSRETA ASSPDAEKSANR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17222; Mature: 17222
Theoretical pI: Translated: 11.47; Mature: 11.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAPARAHRIIVIPASRARASAHIAMTSSFRFAPRRAPSYRFAAVAMLATLALAGCDKS CCCCCCCCCEEEEEECCCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC DSNATAPDHAASAVAKAAAQAANQLDRAASFVDSQIAAAKAGVASAASAVPPVSASDVAS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AAQAHLKNAATAAFGLAASAAGSRLETAGRKLQQWSRETAASSPDAEKSANR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNAAPARAHRIIVIPASRARASAHIAMTSSFRFAPRRAPSYRFAAVAMLATLALAGCDKS CCCCCCCCCEEEEEECCCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC DSNATAPDHAASAVAKAAAQAANQLDRAASFVDSQIAAAKAGVASAASAVPPVSASDVAS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AAQAHLKNAATAAFGLAASAAGSRLETAGRKLQQWSRETAASSPDAEKSANR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA