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The map label for this gene is glxA [H]

Identifier: 238026656

GI number: 238026656

Start: 1087091

End: 1088134

Strand: Direct

Name: glxA [H]

Synonym: bglu_1g10090

Alternate gene names: 238026656

Gene position: 1087091-1088134 (Clockwise)

Preceding gene: 238026655

Following gene: 238026657

Centisome position: 27.83

GC content: 72.22

Gene sequence:

>1044_bases
ATGGCCGCCACCACCGGCCGCACGGGCGGCGCGGCGCGCGCCACGCAGGTCGCGATCGTCGCGCTGCCGCCGGTGTCGAT
GTCGGGCGTCGGCCCGATCGTCGATGCGCTCGCGCTCGCCAACGAGATCGACGGCCGCGCGCTGTACCGCTGGCAGGTCT
GCTCGTGGGACGGGCGGCCGGTGCCGCTCGCGGGCGGCGCGTCGTGGGCCGCCGACGCGGCGTTCAACGACGCCGTCGCC
TGCGACTGGTTGATCGTGATCAGCGAACGATTCCAGCAATTCGCCGACTATCGGCTGTTCCTCGCGAGCCTCGCGCGCGT
GGGCCAGCGCACGCCGCTCGTCACCGGCATCCATCACGGCGTCTGGTGGCTCGCGATGGCGGGGCAGCTGGCGGGCTACC
GGGTGGCCGTGAACTGGGAAACCTACCAGCAGTTCGCCGAGCAGTTCGAGCGCATCATCGTCACGCAGCAGATCTTCGAG
ATCGACCGCGATCGCGCCACCTGCGCGGGCGGCCAGGCCAGCCTCGACTTCATGCTGGCGATGATCGGCCGCGACCACGG
CCCCGCGCTGCCCGAGCGGATCGCCGACGCGCTCGGCTGCGGCACGCCGCGCAGCGGCGAGGCGCGCCAGCGGATTCCGT
TCGTGACGGCGCCGGGCGAGCGTCATCCGCGCCTGAACGACGCGCTGCAGCTGATGGAGGCGAACGTCGAGGACCCGCTC
ACCACCGACGAGATCGCCGCGCTGGTGGGCATCTCGCGGCGCCAGCTCGAACGGCTGTTCCGCCAGTATCTCGGCGCCAT
GCCGTCGAAGTACTACCTGAACCTGCGGCTGCTGAAGGCGCGCACGCAATTGCAGCGCACCAGCAAGTCGGTGGTGCAGG
TCAGCCTCGCGAGCGGCTTCTCGTCGGCCGCGCATTTCTCGAACGCCTACCGCGAGCGCTTCGGCGTGACGCCGCGCGAG
GATCGCCGCGCCTGGCTCGAGAAGCAGCACGGCGCGGCGAGCGAGCCGCGCGCGGGCGCGCTGGTGGAGCGCGGCGACGG
CTGA

Upstream 100 bases:

>100_bases
ACCGAGGAGGAGGGACATCCCGCCGAGGTGCTGTCGCGGCCGAACAGCGAGCGCCTCAGGCAGTTCCTGTCCGGCAGCCT
CAAGTAGGGGCGCCTCGCGC

Downstream 100 bases:

>100_bases
TGCGGCACGCTTCGTGCTTGTCCCCGGCGGGCCCGCGCGCCGGACCCGCGCCCAGGCCGCCGGCCTTGCCGACAGAACCC
GTCGCAATTGCGCAAGACGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MAATTGRTGGAARATQVAIVALPPVSMSGVGPIVDALALANEIDGRALYRWQVCSWDGRPVPLAGGASWAADAAFNDAVA
CDWLIVISERFQQFADYRLFLASLARVGQRTPLVTGIHHGVWWLAMAGQLAGYRVAVNWETYQQFAEQFERIIVTQQIFE
IDRDRATCAGGQASLDFMLAMIGRDHGPALPERIADALGCGTPRSGEARQRIPFVTAPGERHPRLNDALQLMEANVEDPL
TTDEIAALVGISRRQLERLFRQYLGAMPSKYYLNLRLLKARTQLQRTSKSVVQVSLASGFSSAAHFSNAYRERFGVTPRE
DRRAWLEKQHGAASEPRAGALVERGDG

Sequences:

>Translated_347_residues
MAATTGRTGGAARATQVAIVALPPVSMSGVGPIVDALALANEIDGRALYRWQVCSWDGRPVPLAGGASWAADAAFNDAVA
CDWLIVISERFQQFADYRLFLASLARVGQRTPLVTGIHHGVWWLAMAGQLAGYRVAVNWETYQQFAEQFERIIVTQQIFE
IDRDRATCAGGQASLDFMLAMIGRDHGPALPERIADALGCGTPRSGEARQRIPFVTAPGERHPRLNDALQLMEANVEDPL
TTDEIAALVGISRRQLERLFRQYLGAMPSKYYLNLRLLKARTQLQRTSKSVVQVSLASGFSSAAHFSNAYRERFGVTPRE
DRRAWLEKQHGAASEPRAGALVERGDG
>Mature_346_residues
AATTGRTGGAARATQVAIVALPPVSMSGVGPIVDALALANEIDGRALYRWQVCSWDGRPVPLAGGASWAADAAFNDAVAC
DWLIVISERFQQFADYRLFLASLARVGQRTPLVTGIHHGVWWLAMAGQLAGYRVAVNWETYQQFAEQFERIIVTQQIFEI
DRDRATCAGGQASLDFMLAMIGRDHGPALPERIADALGCGTPRSGEARQRIPFVTAPGERHPRLNDALQLMEANVEDPLT
TDEIAALVGISRRQLERLFRQYLGAMPSKYYLNLRLLKARTQLQRTSKSVVQVSLASGFSSAAHFSNAYRERFGVTPRED
RRAWLEKQHGAASEPRAGALVERGDG

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=100, Percent_Identity=36, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38020; Mature: 37888

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATTGRTGGAARATQVAIVALPPVSMSGVGPIVDALALANEIDGRALYRWQVCSWDGRP
CCCCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
VPLAGGASWAADAAFNDAVACDWLIVISERFQQFADYRLFLASLARVGQRTPLVTGIHHG
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VWWLAMAGQLAGYRVAVNWETYQQFAEQFERIIVTQQIFEIDRDRATCAGGQASLDFMLA
HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHH
MIGRDHGPALPERIADALGCGTPRSGEARQRIPFVTAPGERHPRLNDALQLMEANVEDPL
HHCCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCC
TTDEIAALVGISRRQLERLFRQYLGAMPSKYYLNLRLLKARTQLQRTSKSVVQVSLASGF
CHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
SSAAHFSNAYRERFGVTPREDRRAWLEKQHGAASEPRAGALVERGDG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AATTGRTGGAARATQVAIVALPPVSMSGVGPIVDALALANEIDGRALYRWQVCSWDGRP
CCCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
VPLAGGASWAADAAFNDAVACDWLIVISERFQQFADYRLFLASLARVGQRTPLVTGIHHG
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VWWLAMAGQLAGYRVAVNWETYQQFAEQFERIIVTQQIFEIDRDRATCAGGQASLDFMLA
HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHH
MIGRDHGPALPERIADALGCGTPRSGEARQRIPFVTAPGERHPRLNDALQLMEANVEDPL
HHCCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCC
TTDEIAALVGISRRQLERLFRQYLGAMPSKYYLNLRLLKARTQLQRTSKSVVQVSLASGF
CHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
SSAAHFSNAYRERFGVTPREDRRAWLEKQHGAASEPRAGALVERGDG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]