| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is pncB [H]
Identifier: 238026584
GI number: 238026584
Start: 1005846
End: 1007045
Strand: Direct
Name: pncB [H]
Synonym: bglu_1g09300
Alternate gene names: 238026584
Gene position: 1005846-1007045 (Clockwise)
Preceding gene: 238026577
Following gene: 238026585
Centisome position: 25.75
GC content: 63.92
Gene sequence:
>1200_bases ATGATCATTACCTCGCTGCTCGACACCGATCTGTACAAGTTCACGATGATGCAGGTCGTCCTGCATCACTTTCCCGCCGC CAACGTCGAATACCGCTTTCGTTGCCGCACCCCGGACGTCGATCTCGTTCCCTACATCGACGAGATCCGCGACGAGGTGC GCGGGCTCTGCCAGCTGCGCTTCAACGACGCCGAACTCGACTATCTGCGGCAGATGCGGTTCATCAAGAGCGATTTCGTC GATTTCCTCGCGCTGTTCCACCTGAGCGAGAAATACATCGAAATCTCGCCCTCGCCGAAGGGCAACGGCGAGATCGACAT CGCGATCCGCGGTCCCTGGCTGCACACGATCCTGTTCGAGATCCCGGTGCTGGCGATCGTCAACGAGGTCTATTTCCGCA ACACGCAGAGCGAGCCCGACTACGGCGAGGGGCGCGGGCGGCTGCGCGAGAAGATGAAGCTGCTCGGCGCGCGGCCCGAG TTCGCCGACTGCAAGATCGCCGACTACGGCACGCGCCGCCGCTTCTCGAAGGTCTGGCACGAGGAGGTCGCGCTGACGCT GCGCGACGGGCTGGGCGAGCAGTTCGCGGGCACCAGCAATGTCTATTACGCGATGCGGCACGGCATCACGCCGCTCGGCA CCATGGCGCACGAGTATCTGCAGGCCTGTCAGGCGCTCGGCCCGCGGCTGCGCGATTCGCAGATCTACGGCCTCGAGATG TGGGCCAAGGAATATCGCGGCGATCTCGGCATCGCGCTGTCGGACGTCTACGGCATGGACGCGTTCCTGCGCGACTTCGA CATGTACTTCTGCAAGCTGTTCGACGGCGCGCGCCACGATTCGGGCGACCCGTTCGAGTGGGGCGAGCGGATGATCCGCC ATTACGAGGCCAACCGCTGCGACCCGCGCACCAAGGTGCTGGTGTTCTCCGACGCGCTCGACATCCCGAAGGTGCTGCAG CTCTACGAACGCTTCCGCGACCGCTGCAAGCTCGCGTTCGGAGTGGGCACGAACCTGACCAACGATCTCGGCTACCGGCC GCTGCAGATCGTCATCAAGATGGTCCGCTGCAACGGCCAGCCGGTCGCCAAGCTGTCCGACTCGCCGGGCAAGAGCATGT GCGACGACAAGGCCTATCTCGCCTACCTGCGCCAGGTGTTCGGCATCGCGCAGCCGGTCGAGGACGAGGCAGGAAAATAA
Upstream 100 bases:
>100_bases CATGCGGCAGGCAGATCGGGCAGCGCGCGCGCTGCCTGCGGGCTCGGCTCGCTCCGGATTCCGCTACTCCCGCTGATCCC GTTTTTGGCAGTCTCGAATC
Downstream 100 bases:
>100_bases GCGGCCGCCACGAGCGGCGCGCCGGGCCGCTCGGCCGGCCGCGTGCGGGGGCGCCGTTATAATCGAGCCCGATCGTTCGT TATCGTCACGCCCACGAGGA
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPDVDLVPYIDEIRDEVRGLCQLRFNDAELDYLRQMRFIKSDFV DFLALFHLSEKYIEISPSPKGNGEIDIAIRGPWLHTILFEIPVLAIVNEVYFRNTQSEPDYGEGRGRLREKMKLLGARPE FADCKIADYGTRRRFSKVWHEEVALTLRDGLGEQFAGTSNVYYAMRHGITPLGTMAHEYLQACQALGPRLRDSQIYGLEM WAKEYRGDLGIALSDVYGMDAFLRDFDMYFCKLFDGARHDSGDPFEWGERMIRHYEANRCDPRTKVLVFSDALDIPKVLQ LYERFRDRCKLAFGVGTNLTNDLGYRPLQIVIKMVRCNGQPVAKLSDSPGKSMCDDKAYLAYLRQVFGIAQPVEDEAGK
Sequences:
>Translated_399_residues MIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPDVDLVPYIDEIRDEVRGLCQLRFNDAELDYLRQMRFIKSDFV DFLALFHLSEKYIEISPSPKGNGEIDIAIRGPWLHTILFEIPVLAIVNEVYFRNTQSEPDYGEGRGRLREKMKLLGARPE FADCKIADYGTRRRFSKVWHEEVALTLRDGLGEQFAGTSNVYYAMRHGITPLGTMAHEYLQACQALGPRLRDSQIYGLEM WAKEYRGDLGIALSDVYGMDAFLRDFDMYFCKLFDGARHDSGDPFEWGERMIRHYEANRCDPRTKVLVFSDALDIPKVLQ LYERFRDRCKLAFGVGTNLTNDLGYRPLQIVIKMVRCNGQPVAKLSDSPGKSMCDDKAYLAYLRQVFGIAQPVEDEAGK >Mature_399_residues MIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPDVDLVPYIDEIRDEVRGLCQLRFNDAELDYLRQMRFIKSDFV DFLALFHLSEKYIEISPSPKGNGEIDIAIRGPWLHTILFEIPVLAIVNEVYFRNTQSEPDYGEGRGRLREKMKLLGARPE FADCKIADYGTRRRFSKVWHEEVALTLRDGLGEQFAGTSNVYYAMRHGITPLGTMAHEYLQACQALGPRLRDSQIYGLEM WAKEYRGDLGIALSDVYGMDAFLRDFDMYFCKLFDGARHDSGDPFEWGERMIRHYEANRCDPRTKVLVFSDALDIPKVLQ LYERFRDRCKLAFGVGTNLTNDLGYRPLQIVIKMVRCNGQPVAKLSDSPGKSMCDDKAYLAYLRQVFGIAQPVEDEAGK
Specific function: NAD biosynthesis; nicotinamide to NaMN; second step. [C]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Escherichia coli, GI1787162, Length=392, Percent_Identity=44.1326530612245, Blast_Score=333, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6324783, Length=401, Percent_Identity=29.1770573566085, Blast_Score=193, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006406 - InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 46035; Mature: 46035
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPDVDLVPYIDEIRDEVRGLCQLR CEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHEE FNDAELDYLRQMRFIKSDFVDFLALFHLSEKYIEISPSPKGNGEIDIAIRGPWLHTILFE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCCCCCEEEEEEECCHHHHHHHH IPVLAIVNEVYFRNTQSEPDYGEGRGRLREKMKLLGARPEFADCKIADYGTRRRFSKVWH HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHH EEVALTLRDGLGEQFAGTSNVYYAMRHGITPLGTMAHEYLQACQALGPRLRDSQIYGLEM HHHHHHHHHCCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH WAKEYRGDLGIALSDVYGMDAFLRDFDMYFCKLFDGARHDSGDPFEWGERMIRHYEANRC HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC DPRTKVLVFSDALDIPKVLQLYERFRDRCKLAFGVGTNLTNDLGYRPLQIVIKMVRCNGQ CCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC PVAKLSDSPGKSMCDDKAYLAYLRQVFGIAQPVEDEAGK CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIITSLLDTDLYKFTMMQVVLHHFPAANVEYRFRCRTPDVDLVPYIDEIRDEVRGLCQLR CEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHEE FNDAELDYLRQMRFIKSDFVDFLALFHLSEKYIEISPSPKGNGEIDIAIRGPWLHTILFE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCCCCCEEEEEEECCHHHHHHHH IPVLAIVNEVYFRNTQSEPDYGEGRGRLREKMKLLGARPEFADCKIADYGTRRRFSKVWH HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHH EEVALTLRDGLGEQFAGTSNVYYAMRHGITPLGTMAHEYLQACQALGPRLRDSQIYGLEM HHHHHHHHHCCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH WAKEYRGDLGIALSDVYGMDAFLRDFDMYFCKLFDGARHDSGDPFEWGERMIRHYEANRC HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC DPRTKVLVFSDALDIPKVLQLYERFRDRCKLAFGVGTNLTNDLGYRPLQIVIKMVRCNGQ CCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC PVAKLSDSPGKSMCDDKAYLAYLRQVFGIAQPVEDEAGK CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA