Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025520
Identifier: 238025520
GI number: 238025520
Start: 2749735
End: 2750922
Strand: Reverse
Name: 238025520
Synonym: bglu_2g22160
Alternate gene names: NA
Gene position: 2750922-2749735 (Counterclockwise)
Preceding gene: 238025528
Following gene: 238025517
Centisome position: 97.3
GC content: 72.73
Gene sequence:
>1188_bases ATGACGCTTGCAATCGTGTTCGGCCTGTCGTGCCTGTCCCTGATTATCTGGTGCGTGCTGCTGTTCGCGCGCGGCGGCTT CTGGCGCGCGCGCCCGGCCGCCCCGCTGCCGGACGAGGCGCGCGGCGCGGCCGCGGCCGACGGCTGGCCGGCGGTGGTGG TGGTGGTGCCGGCGCGCAACGAGGCGGACGTGATCGGCGCGGCCGTCACGTCGCTGCTGCGGCAGGACTATCGCGGCGCG CTGCACGTGATCGTGGTGGACGATCACAGCACCGACGGCACGGCCGATGCCGCGCGCGCGGCGGCGCTGGCCGCCCGGCA TGCCGAACGGCTCACGGTGCTCGCCGCGCAGCCGCTGCCGCCCGGCTGGTCGGGCAAGGTCTGGGCGCAGTCGCAGGGCA TCGCCGCGGTACGCACGCGCGCGCTGCCGGCCGACTACCTGCTGCTGACCGACGCCGACATTGGCCATCCGGCCGACGCG GTGACCCAGCTCGTCACGCGCGCCCAGGCCGAAGGCCGCGATCTGGTGTCGCTGATGGTGCGGCTGCGCTGCGATTCGTT CTGGGAGAAGGCGCTGATTCCGGCTTTCGTGTTCTTCTTCGCCAAGCTCTACCCGTTCTCGTGGATCAACGACACGCGCA GCAAGACGGCCGGCGCGGCCGGCGGCTGCATGCTGGTGCGGCGCGCGGCGCTGGAGGAGGCGGGCGGGATCGAGTCGATC CGCGGCGCGCTGATCGACGATTGCAGCCTGGCCGCCAGGATCAAGTTCCGCGGCGGCCGGCATCACCCGATCCGGCTCGA TCTCGCCGAGCGCAGCGTGTCGCTGCGCCCGTATGACAGCTGGCGCGACATCTGGAACATGATCGCGCGCACCGCGTTCA CGCAGCTGCGCTATTCGCCGCTGCTGCTGGCCGGCACGCTGCTCGGCATGTCGATCGTCTATCTGCTGCCGCCGCTGGCC GCGCTGGCCTATGGCGCGCGCGCGTGGCCGGCCTGGCTCGCGTGGGCGGCGATGAGCGCGTCCTACGCGCCGATGCTGGC CTACTACCGGCGCTCGCTGCTGTGGGCGCCCGCGCTGCCGCTCGTCGCGCTGTTCTACAACGGCGCGACGTTCGCGTCCG CGTGGCGCTACTGGCGCGGCAAGGGCGGACAATGGAAGGCGCGCGTGCAGGCGCCGGTGGAGCGCTGA
Upstream 100 bases:
>100_bases GCGCCGGCTCACAGGCGGACTGCATGGAAGTCGAATCGATTGGTTTGTCCCCGAATCTCACGGCCGAACAGGCGGCCGGC GTCGTCACGAGGGAGCGCGC
Downstream 100 bases:
>100_bases ACGCGGGCGCGCGCCGCTGCGCCTGGCCGAATGAAAAAACGGCACACGGTTGCGCACCGTGTGCCGTTTCTGTTTTGGCG CGCTGCCGCTCGCGCTTGGG
Product: glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Hopene-Associated Glycosyltransferase HpnB; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase; Integral Membrane Protein; HpnB Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Group 2 Family; TPR Domain-Containing Protein; Glycosyl Transferase Domain-Containing Protein; Squalene-Phytoene Synthase
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTLAIVFGLSCLSLIIWCVLLFARGGFWRARPAAPLPDEARGAAAADGWPAVVVVVPARNEADVIGAAVTSLLRQDYRGA LHVIVVDDHSTDGTADAARAAALAARHAERLTVLAAQPLPPGWSGKVWAQSQGIAAVRTRALPADYLLLTDADIGHPADA VTQLVTRAQAEGRDLVSLMVRLRCDSFWEKALIPAFVFFFAKLYPFSWINDTRSKTAGAAGGCMLVRRAALEEAGGIESI RGALIDDCSLAARIKFRGGRHHPIRLDLAERSVSLRPYDSWRDIWNMIARTAFTQLRYSPLLLAGTLLGMSIVYLLPPLA ALAYGARAWPAWLAWAAMSASYAPMLAYYRRSLLWAPALPLVALFYNGATFASAWRYWRGKGGQWKARVQAPVER
Sequences:
>Translated_395_residues MTLAIVFGLSCLSLIIWCVLLFARGGFWRARPAAPLPDEARGAAAADGWPAVVVVVPARNEADVIGAAVTSLLRQDYRGA LHVIVVDDHSTDGTADAARAAALAARHAERLTVLAAQPLPPGWSGKVWAQSQGIAAVRTRALPADYLLLTDADIGHPADA VTQLVTRAQAEGRDLVSLMVRLRCDSFWEKALIPAFVFFFAKLYPFSWINDTRSKTAGAAGGCMLVRRAALEEAGGIESI RGALIDDCSLAARIKFRGGRHHPIRLDLAERSVSLRPYDSWRDIWNMIARTAFTQLRYSPLLLAGTLLGMSIVYLLPPLA ALAYGARAWPAWLAWAAMSASYAPMLAYYRRSLLWAPALPLVALFYNGATFASAWRYWRGKGGQWKARVQAPVER >Mature_394_residues TLAIVFGLSCLSLIIWCVLLFARGGFWRARPAAPLPDEARGAAAADGWPAVVVVVPARNEADVIGAAVTSLLRQDYRGAL HVIVVDDHSTDGTADAARAAALAARHAERLTVLAAQPLPPGWSGKVWAQSQGIAAVRTRALPADYLLLTDADIGHPADAV TQLVTRAQAEGRDLVSLMVRLRCDSFWEKALIPAFVFFFAKLYPFSWINDTRSKTAGAAGGCMLVRRAALEEAGGIESIR GALIDDCSLAARIKFRGGRHHPIRLDLAERSVSLRPYDSWRDIWNMIARTAFTQLRYSPLLLAGTLLGMSIVYLLPPLAA LAYGARAWPAWLAWAAMSASYAPMLAYYRRSLLWAPALPLVALFYNGATFASAWRYWRGKGGQWKARVQAPVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43049; Mature: 42918
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAIVFGLSCLSLIIWCVLLFARGGFWRARPAAPLPDEARGAAAADGWPAVVVVVPARN CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC EADVIGAAVTSLLRQDYRGALHVIVVDDHSTDGTADAARAAALAARHAERLTVLAAQPLP CHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCC PGWSGKVWAQSQGIAAVRTRALPADYLLLTDADIGHPADAVTQLVTRAQAEGRDLVSLMV CCCCCCEEECCCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH RLRCDSFWEKALIPAFVFFFAKLYPFSWINDTRSKTAGAAGGCMLVRRAALEEAGGIESI HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCHHHH RGALIDDCSLAARIKFRGGRHHPIRLDLAERSVSLRPYDSWRDIWNMIARTAFTQLRYSP HHHHHCCCCCEEEEEECCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH LLLAGTLLGMSIVYLLPPLAALAYGARAWPAWLAWAAMSASYAPMLAYYRRSLLWAPALP HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH LVALFYNGATFASAWRYWRGKGGQWKARVQAPVER HHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCC >Mature Secondary Structure TLAIVFGLSCLSLIIWCVLLFARGGFWRARPAAPLPDEARGAAAADGWPAVVVVVPARN EEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC EADVIGAAVTSLLRQDYRGALHVIVVDDHSTDGTADAARAAALAARHAERLTVLAAQPLP CHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCC PGWSGKVWAQSQGIAAVRTRALPADYLLLTDADIGHPADAVTQLVTRAQAEGRDLVSLMV CCCCCCEEECCCCCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHH RLRCDSFWEKALIPAFVFFFAKLYPFSWINDTRSKTAGAAGGCMLVRRAALEEAGGIESI HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCHHHH RGALIDDCSLAARIKFRGGRHHPIRLDLAERSVSLRPYDSWRDIWNMIARTAFTQLRYSP HHHHHCCCCCEEEEEECCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH LLLAGTLLGMSIVYLLPPLAALAYGARAWPAWLAWAAMSASYAPMLAYYRRSLLWAPALP HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH LVALFYNGATFASAWRYWRGKGGQWKARVQAPVER HHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA