Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025467
Identifier: 238025467
GI number: 238025467
Start: 2679319
End: 2680770
Strand: Reverse
Name: 238025467
Synonym: bglu_2g21590
Alternate gene names: NA
Gene position: 2680770-2679319 (Counterclockwise)
Preceding gene: 238025470
Following gene: 238025466
Centisome position: 94.82
GC content: 74.86
Gene sequence:
>1452_bases ATGACAACCCTTCTCCCGTTTTCCGCTGTTCGTCCGTGCGCCGCGATGGCGGTCGCCTGGGTCACCGTGCTCGCCGGTTG CGCCTCGCCGCCGCAACCGGAGGTCGTCGCCCGCCAGACCGGCTGGATGCGCAGCGAGGTGGCCGATTCCTATGTCTATG CCTATCCGCTCGTGATGATGGATCTCGCGCGGCAAGCCGCGGCCGGCGGCGACGGCGCGGCGCCCGTGCCCGTCAACACG CTGAGCGGCGGCGTCGCGCTGCCGCCGCCCGGCGCCACGAACCCGCCGCTGCCGGGCGTCGACACGCTCGACTCGGCGGG CTGGCTCGACGTGGCTGCCGAGCCCGTGCTGGTCACGCTGCCGGATACGCACGGGCGCTATCTGGACGCGCGCGTGCTGG ACATGTGGACCAACGTCGTCTGGTCCACCGGGGCCGACCCCAAGCCGCGCAGCGGCTCGGCTCGGGAGCAAACGATTGCC TTCGTCGGCCCCGATTTCCACGGCACGCTGCCGGACGGCGTCAAGCGGGTCGACCTGCCGGCGCACGAGGCCTGGATCGG CGTGCGGATCCGCACCAGCGGCGGCCGCGACCTGAACGAGGCGCGCCGCTGGCAGCGCGCGGTGCGGATCGTGCCGCTGT CGGCGTTCGCGGCGCGCCCCGCGCGCGCGGAGCGCGCCAGCCGCGCGCAGGCGGCGCTCGACGAAACGGCGGCCAACGCC GCCGCGACCTCGGCGACGACCGCCGCGCGCGTCGCGGCGCTCGACGCCAAGGCGTTCTTCTCGCGTTTCGCGGCCGCGTT GCGCGAGAACCCGCCGGTGCAGCCGGACGCGCATGTCGACCAGGTGCTCGACGAGATCGGCGTGAAGGCGGGCAGCGAGG TGGATTGGACCGACGAACGCCTCGCCGCCGCGACGCGCGGCGTCGAGGATGCGCGCGCGCGGCTCGCCGTGCCGCCGTCG AATCTGCTCGCGGCCGACGGCTGGCGCTGGCTCGGCGGCGACGCCGGCCATTACGGGCAGGATTACGCGCTGCGCGCCTA CGTGGCGGCCACGCGTTTCGGCGCCGGCGCGCGCGAGGACGAAACCGTCGCCGTGGTGACGGTGGACGGCGACGGCAAGC CGCTCGACGGCGCCAATCGCTACGTGCTGCATTTCGCGCCGCGCGCGCTGCCGCCGGTGCGCGCGTTCTGGTCGCTGACG CCCTACACGGCCGACGGCGCGCTGCCCGAGGTGGGCCGCGGACGGCGCGCGATCGGCAGCTTCGACCGGCTGCGGCGCAA TCGCGACGGTTCGGTGGATGTCGTCGTGGCGGCGGCCTCGCCGGGCCGGGCTCATGCGGCGAACTGGCTGCCCGTGCCGC GCGCCGATTTCCAACTGGTGCTGCGCCTGTACGCGCCGAAGGCCGAGGCCACCGACGGCTCTTGGCAGCCGCCGGCTGCG CAGCGGCGCTGA
Upstream 100 bases:
>100_bases GCCGGATGCGAACGGACGACGCACCCGCCATGAGCATGAGACCGCGCGCGCCGGCCCCAATCAACAAGCACAGCCGACGC TGCGCCGCTCGCCGACCACC
Downstream 100 bases:
>100_bases TTTTCTTGAAAGTGAGTGCCTGCTTCGAAATATTGGCCGGGACGCGCGGCGCGGCCGTGGCGCTCAGGCCGGGCCCGCCT GGCCGATGCGCGTGACCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTTLLPFSAVRPCAAMAVAWVTVLAGCASPPQPEVVARQTGWMRSEVADSYVYAYPLVMMDLARQAAAGGDGAAPVPVNT LSGGVALPPPGATNPPLPGVDTLDSAGWLDVAAEPVLVTLPDTHGRYLDARVLDMWTNVVWSTGADPKPRSGSAREQTIA FVGPDFHGTLPDGVKRVDLPAHEAWIGVRIRTSGGRDLNEARRWQRAVRIVPLSAFAARPARAERASRAQAALDETAANA AATSATTAARVAALDAKAFFSRFAAALRENPPVQPDAHVDQVLDEIGVKAGSEVDWTDERLAAATRGVEDARARLAVPPS NLLAADGWRWLGGDAGHYGQDYALRAYVAATRFGAGAREDETVAVVTVDGDGKPLDGANRYVLHFAPRALPPVRAFWSLT PYTADGALPEVGRGRRAIGSFDRLRRNRDGSVDVVVAAASPGRAHAANWLPVPRADFQLVLRLYAPKAEATDGSWQPPAA QRR
Sequences:
>Translated_483_residues MTTLLPFSAVRPCAAMAVAWVTVLAGCASPPQPEVVARQTGWMRSEVADSYVYAYPLVMMDLARQAAAGGDGAAPVPVNT LSGGVALPPPGATNPPLPGVDTLDSAGWLDVAAEPVLVTLPDTHGRYLDARVLDMWTNVVWSTGADPKPRSGSAREQTIA FVGPDFHGTLPDGVKRVDLPAHEAWIGVRIRTSGGRDLNEARRWQRAVRIVPLSAFAARPARAERASRAQAALDETAANA AATSATTAARVAALDAKAFFSRFAAALRENPPVQPDAHVDQVLDEIGVKAGSEVDWTDERLAAATRGVEDARARLAVPPS NLLAADGWRWLGGDAGHYGQDYALRAYVAATRFGAGAREDETVAVVTVDGDGKPLDGANRYVLHFAPRALPPVRAFWSLT PYTADGALPEVGRGRRAIGSFDRLRRNRDGSVDVVVAAASPGRAHAANWLPVPRADFQLVLRLYAPKAEATDGSWQPPAA QRR >Mature_482_residues TTLLPFSAVRPCAAMAVAWVTVLAGCASPPQPEVVARQTGWMRSEVADSYVYAYPLVMMDLARQAAAGGDGAAPVPVNTL SGGVALPPPGATNPPLPGVDTLDSAGWLDVAAEPVLVTLPDTHGRYLDARVLDMWTNVVWSTGADPKPRSGSAREQTIAF VGPDFHGTLPDGVKRVDLPAHEAWIGVRIRTSGGRDLNEARRWQRAVRIVPLSAFAARPARAERASRAQAALDETAANAA ATSATTAARVAALDAKAFFSRFAAALRENPPVQPDAHVDQVLDEIGVKAGSEVDWTDERLAAATRGVEDARARLAVPPSN LLAADGWRWLGGDAGHYGQDYALRAYVAATRFGAGAREDETVAVVTVDGDGKPLDGANRYVLHFAPRALPPVRAFWSLTP YTADGALPEVGRGRRAIGSFDRLRRNRDGSVDVVVAAASPGRAHAANWLPVPRADFQLVLRLYAPKAEATDGSWQPPAAQ RR
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51248; Mature: 51117
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLLPFSAVRPCAAMAVAWVTVLAGCASPPQPEVVARQTGWMRSEVADSYVYAYPLVMM CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH DLARQAAAGGDGAAPVPVNTLSGGVALPPPGATNPPLPGVDTLDSAGWLDVAAEPVLVTL HHHHHHHCCCCCCCCCCCHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEC PDTHGRYLDARVLDMWTNVVWSTGADPKPRSGSAREQTIAFVGPDFHGTLPDGVKRVDLP CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCC AHEAWIGVRIRTSGGRDLNEARRWQRAVRIVPLSAFAARPARAERASRAQAALDETAANA CCCEEEEEEEECCCCCCHHHHHHHHHHHEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHH AATSATTAARVAALDAKAFFSRFAAALRENPPVQPDAHVDQVLDEIGVKAGSEVDWTDER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH LAAATRGVEDARARLAVPPSNLLAADGWRWLGGDAGHYGQDYALRAYVAATRFGAGARED HHHHHCCHHHHHHEEECCCHHCEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCC ETVAVVTVDGDGKPLDGANRYVLHFAPRALPPVRAFWSLTPYTADGALPEVGRGRRAIGS CEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHH FDRLRRNRDGSVDVVVAAASPGRAHAANWLPVPRADFQLVLRLYAPKAEATDGSWQPPAA HHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC QRR CCC >Mature Secondary Structure TTLLPFSAVRPCAAMAVAWVTVLAGCASPPQPEVVARQTGWMRSEVADSYVYAYPLVMM CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH DLARQAAAGGDGAAPVPVNTLSGGVALPPPGATNPPLPGVDTLDSAGWLDVAAEPVLVTL HHHHHHHCCCCCCCCCCCHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEC PDTHGRYLDARVLDMWTNVVWSTGADPKPRSGSAREQTIAFVGPDFHGTLPDGVKRVDLP CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCC AHEAWIGVRIRTSGGRDLNEARRWQRAVRIVPLSAFAARPARAERASRAQAALDETAANA CCCEEEEEEEECCCCCCHHHHHHHHHHHEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHH AATSATTAARVAALDAKAFFSRFAAALRENPPVQPDAHVDQVLDEIGVKAGSEVDWTDER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH LAAATRGVEDARARLAVPPSNLLAADGWRWLGGDAGHYGQDYALRAYVAATRFGAGARED HHHHHCCHHHHHHEEECCCHHCEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCC ETVAVVTVDGDGKPLDGANRYVLHFAPRALPPVRAFWSLTPYTADGALPEVGRGRRAIGS CEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHH FDRLRRNRDGSVDVVVAAASPGRAHAANWLPVPRADFQLVLRLYAPKAEATDGSWQPPAA HHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC QRR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA