Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025422
Identifier: 238025422
GI number: 238025422
Start: 2611350
End: 2614175
Strand: Reverse
Name: 238025422
Synonym: bglu_2g21110
Alternate gene names: NA
Gene position: 2614175-2611350 (Counterclockwise)
Preceding gene: 238025423
Following gene: 238025421
Centisome position: 92.46
GC content: 63.87
Gene sequence:
>2826_bases ATGACCCAAGAGACGACCCGCAAGAAGAACTGCGCCAACTGCGAAAAGACCGGCTTGCCGATTCTGCCGGTGCGCTACGC GGTGTTGCCGAAGAATGCCCATCTCAAGCTGCCGGCCGGCATCACCGGCAAAGGCATGACCGATATCGCGCTGCAGGAAC ACCAGTACGGCCTGCGCACGCTGCGTGAGGGCTGGCTGTTCGTGTTCTACGAGCGCGGCGCGCGCGGCCGCGATTATTGG CAGGCCTACCGGGTGACGCCGGACGGGCGACTGTGGAAGCAGGACCTGCCGTTGCCGCGCGAGCCGCGCACGGACCCGGC CTGCGTGCAAACGGGCGTCGCGCTCCAGATGGACATCATCACCGTCGAGCAGCCGCAGAAATGCGGCACGGTCTGGCTGG CGTTTTCCGAGCACGCCTGGCACGACGAGATCTTCAAGCAGTACGCCAGCAATGCCGCGCTGCGCGCCCAGCGCATGCAG TCGATCGAGCCGGCGCAGTGGATCGGGTCGGGCACGGATCCGCATGGTCACGCCGTGCTGGCGACACAGGCCTGCGTCGA CGACGTGGTCGAATACATGCCCGGCTTCGATCCCAAGCTGCTCAATCCGCCCCCGGCAGCGCTCTCCGATGGGACCGGCC AATACAAGCCGGACCTGCTTGCCCGCGTGGCGACGCGGTATCCGTTGGCGATCCGTCAGGCGACGCCCGACTCGGCCAGC ACGCAGCTGGTGAAGCTCATGCATACCGTCGGCGAAACCAGCCCCGGCAAGTCGCATCCGCCGATGCTGCTGGCTCTGTG GGATGGCATCGGCGCGGTGCATGAGCTCAATGGTTTCCGTAACGACGCCGGAAGCATGCTGCAGCTCTACGTCAAGGAGC GGGCCGCGCAGGTCGACGCCATGCAGTCGATTGACGAGGCCGAAATCCTCGTCCGCAACGGCGCGGTGGCATCCAAGAGC CGGATGCGCTCGGCCCTGCAGGCGGGGTGGGAGGCGCTGAAGGCGAACCCCTACGCCGGCGACGGCGTGGTGCCGATCAC GCCCCTCCTCTCGCCCGCCGAGCAGGCGGCATCCGACAGACGCATCGAAGCTGCGGGCGAGATCAGTCCCGCCGAGGCGC AGCGCATCGGCAACGAAGCCTGGCCGAAGTACCGCGAGAAGCTCGACATCACGAAGCTGGAGCACTTCAAGTCGCGGTTC GAGGCACTCCAGCACGACATTGAGGCGCTACAGGCCAAGCGTGCCGATGACATCGATGCCTGGTTGAAGGCACCGGTACT GCTCGCCACGCTTCACGACTACAGCGAAACCGACATCGGCGACGGCGTCGCGTTCGATGGCGTGGTGGCCGAGGCCATCA CCGGCCTGCCTTCCGAGGCAAAGGGCGAGAAGATCGTCGAAACCCTGGTCAATCAAACGGACCCGACGCAGGCCACGAGC CTCGTCTGGCGTGCCTATGCGTACAACCAGCGCGAGCCGAAAGCCGAGATCAAGGAACTGCTCGCGCAGGCGACCGCCTA CCGCGCACCGCTAGGCGAGCAGCTCGCGGAGTGGTCGGAGAAGATCGCCAAGGCACTGGAAAAGCTGAAGACGTTCTCGG AACTCCGAGAGAAGATCGGGGAGGTGGATGAGCACGCGACGCCCGTCTCCTCGACCGAAGCGGCGCTCAAGAAGTATCAC ACCGACCGGCTGGTCGTCGCCACTGGCAACGCGCTCTTCAAATGGACCGGCATCGGCAAGACGGGCGATTGCGCCGGCGA GTACCTGATCCGCGCCGTGCTGATGATGCGCGTGGGCATCAGCAAGGACGATACGGTCAAGATCGTGAAGGAAGCGGTGA AGGCGGAGCCCGCGCTGCGGGAAGCGTTCGAACGCGGCTACCAGGCGCTCAGGCGGGCCGGCGTACCAGCACAACGGGCT TTCACGGAAGCGATGCGAGATCTGGCGGCGGATAAGCGCGGCGAGGTCATGCGTGCACAATGGAACGCCGTGCGAGTCAC GAAGGAAGGCGAGGAAGCGGCCACTGGCATCCGAATCGCCGGCGTGCTGGCGATCATCGAGGTGTTCTGCTTCGCGGCAG CACTGACGAAGGTTGACAAGAGCGGGCAGGATTATGCGCTGCTCGTGGCGAGCGGCTTGTCGGCCACGTCGGCCTGCCTC ACGGCGTCCACCAAGGCAATGACCGCGATGGCAGAGCATGCCGCGCAGACGTTGGCGAATCTTAAGGCGATCACGGGGTA TTTGGGGGGGGTATCGGCGCTTATCGGCGCCGTCGTGGACGCAGGTAAGGTATCCGACAATTTCAAAAATCGAAAGTATT CGCTCGGGGTGGCCTACGTGTTCAAAGTAGTCTTGGGATTGGGGACCGTATCTGCCAATCTTCTGACGGCGATGTCCTCG TCGGCACCACTGATCGCGCGCGTCGCTGGAGGAAAAGTAGCCTGGCTCGGCAAGATCGGCGCAGGAATTGAAGGTGCGGC GGCGCGAACGGAGGCACTGGCTGCTGGCAAGGCTGTTAACGTCGCAGTTACTACGGCCATGGATGCAGCGGCTGAGGAAG CGGGGGTCGTCATTGGCGAGCGCGCTGCGCTGCTGATGCTCGGCCGCGCCGTGCTGTTCCTGTCGGGATGGGAAATCGCG ATCGTTATTATGGTGATCCAGTTGCTGATCGCGTGGTGGGAAGACGACGAGATGCAATCGTGGCTAGAGAAATGTGTATT CGGTAAATCGCCCAATTCGCCACCTTGGTCTGCGGGTAAGCAACACGAAGGATTCGAAAAAGCGTTGAAGGCAGTCGGTC TTCAGGCAGAGGGAGCAAAGGAATGA
Upstream 100 bases:
>100_bases ACACGGCGGCCGTGAGCGAATTGTCGACGGATGAAATCGACGAAATCCGGCGCGGCGAGTGGCATGGCGCACAGAACAAC GACGGGGATCGATTGCCAGC
Downstream 100 bases:
>100_bases CAACGAAAGTTACGCAGGGTACCGCACAGTTGTTGCGCGGCCGCATCCAGAACCTGCGCAAGACGCGCTGCCGTCGGGAT TTCGTCTTTACCGCGAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 941; Mature: 940
Protein sequence:
>941_residues MTQETTRKKNCANCEKTGLPILPVRYAVLPKNAHLKLPAGITGKGMTDIALQEHQYGLRTLREGWLFVFYERGARGRDYW QAYRVTPDGRLWKQDLPLPREPRTDPACVQTGVALQMDIITVEQPQKCGTVWLAFSEHAWHDEIFKQYASNAALRAQRMQ SIEPAQWIGSGTDPHGHAVLATQACVDDVVEYMPGFDPKLLNPPPAALSDGTGQYKPDLLARVATRYPLAIRQATPDSAS TQLVKLMHTVGETSPGKSHPPMLLALWDGIGAVHELNGFRNDAGSMLQLYVKERAAQVDAMQSIDEAEILVRNGAVASKS RMRSALQAGWEALKANPYAGDGVVPITPLLSPAEQAASDRRIEAAGEISPAEAQRIGNEAWPKYREKLDITKLEHFKSRF EALQHDIEALQAKRADDIDAWLKAPVLLATLHDYSETDIGDGVAFDGVVAEAITGLPSEAKGEKIVETLVNQTDPTQATS LVWRAYAYNQREPKAEIKELLAQATAYRAPLGEQLAEWSEKIAKALEKLKTFSELREKIGEVDEHATPVSSTEAALKKYH TDRLVVATGNALFKWTGIGKTGDCAGEYLIRAVLMMRVGISKDDTVKIVKEAVKAEPALREAFERGYQALRRAGVPAQRA FTEAMRDLAADKRGEVMRAQWNAVRVTKEGEEAATGIRIAGVLAIIEVFCFAAALTKVDKSGQDYALLVASGLSATSACL TASTKAMTAMAEHAAQTLANLKAITGYLGGVSALIGAVVDAGKVSDNFKNRKYSLGVAYVFKVVLGLGTVSANLLTAMSS SAPLIARVAGGKVAWLGKIGAGIEGAAARTEALAAGKAVNVAVTTAMDAAAEEAGVVIGERAALLMLGRAVLFLSGWEIA IVIMVIQLLIAWWEDDEMQSWLEKCVFGKSPNSPPWSAGKQHEGFEKALKAVGLQAEGAKE
Sequences:
>Translated_941_residues MTQETTRKKNCANCEKTGLPILPVRYAVLPKNAHLKLPAGITGKGMTDIALQEHQYGLRTLREGWLFVFYERGARGRDYW QAYRVTPDGRLWKQDLPLPREPRTDPACVQTGVALQMDIITVEQPQKCGTVWLAFSEHAWHDEIFKQYASNAALRAQRMQ SIEPAQWIGSGTDPHGHAVLATQACVDDVVEYMPGFDPKLLNPPPAALSDGTGQYKPDLLARVATRYPLAIRQATPDSAS TQLVKLMHTVGETSPGKSHPPMLLALWDGIGAVHELNGFRNDAGSMLQLYVKERAAQVDAMQSIDEAEILVRNGAVASKS RMRSALQAGWEALKANPYAGDGVVPITPLLSPAEQAASDRRIEAAGEISPAEAQRIGNEAWPKYREKLDITKLEHFKSRF EALQHDIEALQAKRADDIDAWLKAPVLLATLHDYSETDIGDGVAFDGVVAEAITGLPSEAKGEKIVETLVNQTDPTQATS LVWRAYAYNQREPKAEIKELLAQATAYRAPLGEQLAEWSEKIAKALEKLKTFSELREKIGEVDEHATPVSSTEAALKKYH TDRLVVATGNALFKWTGIGKTGDCAGEYLIRAVLMMRVGISKDDTVKIVKEAVKAEPALREAFERGYQALRRAGVPAQRA FTEAMRDLAADKRGEVMRAQWNAVRVTKEGEEAATGIRIAGVLAIIEVFCFAAALTKVDKSGQDYALLVASGLSATSACL TASTKAMTAMAEHAAQTLANLKAITGYLGGVSALIGAVVDAGKVSDNFKNRKYSLGVAYVFKVVLGLGTVSANLLTAMSS SAPLIARVAGGKVAWLGKIGAGIEGAAARTEALAAGKAVNVAVTTAMDAAAEEAGVVIGERAALLMLGRAVLFLSGWEIA IVIMVIQLLIAWWEDDEMQSWLEKCVFGKSPNSPPWSAGKQHEGFEKALKAVGLQAEGAKE >Mature_940_residues TQETTRKKNCANCEKTGLPILPVRYAVLPKNAHLKLPAGITGKGMTDIALQEHQYGLRTLREGWLFVFYERGARGRDYWQ AYRVTPDGRLWKQDLPLPREPRTDPACVQTGVALQMDIITVEQPQKCGTVWLAFSEHAWHDEIFKQYASNAALRAQRMQS IEPAQWIGSGTDPHGHAVLATQACVDDVVEYMPGFDPKLLNPPPAALSDGTGQYKPDLLARVATRYPLAIRQATPDSAST QLVKLMHTVGETSPGKSHPPMLLALWDGIGAVHELNGFRNDAGSMLQLYVKERAAQVDAMQSIDEAEILVRNGAVASKSR MRSALQAGWEALKANPYAGDGVVPITPLLSPAEQAASDRRIEAAGEISPAEAQRIGNEAWPKYREKLDITKLEHFKSRFE ALQHDIEALQAKRADDIDAWLKAPVLLATLHDYSETDIGDGVAFDGVVAEAITGLPSEAKGEKIVETLVNQTDPTQATSL VWRAYAYNQREPKAEIKELLAQATAYRAPLGEQLAEWSEKIAKALEKLKTFSELREKIGEVDEHATPVSSTEAALKKYHT DRLVVATGNALFKWTGIGKTGDCAGEYLIRAVLMMRVGISKDDTVKIVKEAVKAEPALREAFERGYQALRRAGVPAQRAF TEAMRDLAADKRGEVMRAQWNAVRVTKEGEEAATGIRIAGVLAIIEVFCFAAALTKVDKSGQDYALLVASGLSATSACLT ASTKAMTAMAEHAAQTLANLKAITGYLGGVSALIGAVVDAGKVSDNFKNRKYSLGVAYVFKVVLGLGTVSANLLTAMSSS APLIARVAGGKVAWLGKIGAGIEGAAARTEALAAGKAVNVAVTTAMDAAAEEAGVVIGERAALLMLGRAVLFLSGWEIAI VIMVIQLLIAWWEDDEMQSWLEKCVFGKSPNSPPWSAGKQHEGFEKALKAVGLQAEGAKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101690; Mature: 101559
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQETTRKKNCANCEKTGLPILPVRYAVLPKNAHLKLPAGITGKGMTDIALQEHQYGLRT CCCCHHCCCCCCCHHHCCCCEEEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHH LREGWLFVFYERGARGRDYWQAYRVTPDGRLWKQDLPLPREPRTDPACVQTGVALQMDII HHCCCEEEEEECCCCCCCHHHHEEECCCCCHHHCCCCCCCCCCCCHHHHHCCCEEEEEEE TVEQPQKCGTVWLAFSEHAWHDEIFKQYASNAALRAQRMQSIEPAQWIGSGTDPHGHAVL EECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEE ATQACVDDVVEYMPGFDPKLLNPPPAALSDGTGQYKPDLLARVATRYPLAIRQATPDSAS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHH TQLVKLMHTVGETSPGKSHPPMLLALWDGIGAVHELNGFRNDAGSMLQLYVKERAAQVDA HHHHHHHHHHCCCCCCCCCCCEEEEEHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH MQSIDEAEILVRNGAVASKSRMRSALQAGWEALKANPYAGDGVVPITPLLSPAEQAASDR HHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCC RIEAAGEISPAEAQRIGNEAWPKYREKLDITKLEHFKSRFEALQHDIEALQAKRADDIDA CCCCCCCCCHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH WLKAPVLLATLHDYSETDIGDGVAFDGVVAEAITGLPSEAKGEKIVETLVNQTDPTQATS HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHH LVWRAYAYNQREPKAEIKELLAQATAYRAPLGEQLAEWSEKIAKALEKLKTFSELREKIG HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EVDEHATPVSSTEAALKKYHTDRLVVATGNALFKWTGIGKTGDCAGEYLIRAVLMMRVGI CHHHCCCCCCHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC SKDDTVKIVKEAVKAEPALREAFERGYQALRRAGVPAQRAFTEAMRDLAADKRGEVMRAQ CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEC WNAVRVTKEGEEAATGIRIAGVLAIIEVFCFAAALTKVDKSGQDYALLVASGLSATSACL CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH TASTKAMTAMAEHAAQTLANLKAITGYLGGVSALIGAVVDAGKVSDNFKNRKYSLGVAYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHH FKVVLGLGTVSANLLTAMSSSAPLIARVAGGKVAWLGKIGAGIEGAAARTEALAAGKAVN HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHCCCCCCHHHHHHHHHCCCEEE VAVTTAMDAAAEEAGVVIGERAALLMLGRAVLFLSGWEIAIVIMVIQLLIAWWEDDEMQS EEEHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH WLEKCVFGKSPNSPPWSAGKQHEGFEKALKAVGLQAEGAKE HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TQETTRKKNCANCEKTGLPILPVRYAVLPKNAHLKLPAGITGKGMTDIALQEHQYGLRT CCCHHCCCCCCCHHHCCCCEEEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHH LREGWLFVFYERGARGRDYWQAYRVTPDGRLWKQDLPLPREPRTDPACVQTGVALQMDII HHCCCEEEEEECCCCCCCHHHHEEECCCCCHHHCCCCCCCCCCCCHHHHHCCCEEEEEEE TVEQPQKCGTVWLAFSEHAWHDEIFKQYASNAALRAQRMQSIEPAQWIGSGTDPHGHAVL EECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEE ATQACVDDVVEYMPGFDPKLLNPPPAALSDGTGQYKPDLLARVATRYPLAIRQATPDSAS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHH TQLVKLMHTVGETSPGKSHPPMLLALWDGIGAVHELNGFRNDAGSMLQLYVKERAAQVDA HHHHHHHHHHCCCCCCCCCCCEEEEEHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH MQSIDEAEILVRNGAVASKSRMRSALQAGWEALKANPYAGDGVVPITPLLSPAEQAASDR HHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCC RIEAAGEISPAEAQRIGNEAWPKYREKLDITKLEHFKSRFEALQHDIEALQAKRADDIDA CCCCCCCCCHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH WLKAPVLLATLHDYSETDIGDGVAFDGVVAEAITGLPSEAKGEKIVETLVNQTDPTQATS HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHH LVWRAYAYNQREPKAEIKELLAQATAYRAPLGEQLAEWSEKIAKALEKLKTFSELREKIG HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EVDEHATPVSSTEAALKKYHTDRLVVATGNALFKWTGIGKTGDCAGEYLIRAVLMMRVGI CHHHCCCCCCHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC SKDDTVKIVKEAVKAEPALREAFERGYQALRRAGVPAQRAFTEAMRDLAADKRGEVMRAQ CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEC WNAVRVTKEGEEAATGIRIAGVLAIIEVFCFAAALTKVDKSGQDYALLVASGLSATSACL CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH TASTKAMTAMAEHAAQTLANLKAITGYLGGVSALIGAVVDAGKVSDNFKNRKYSLGVAYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHH FKVVLGLGTVSANLLTAMSSSAPLIARVAGGKVAWLGKIGAGIEGAAARTEALAAGKAVN HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHCCCCCCHHHHHHHHHCCCEEE VAVTTAMDAAAEEAGVVIGERAALLMLGRAVLFLSGWEIAIVIMVIQLLIAWWEDDEMQS EEEHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH WLEKCVFGKSPNSPPWSAGKQHEGFEKALKAVGLQAEGAKE HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA