Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025417
Identifier: 238025417
GI number: 238025417
Start: 2606229
End: 2606975
Strand: Reverse
Name: 238025417
Synonym: bglu_2g21060
Alternate gene names: NA
Gene position: 2606975-2606229 (Counterclockwise)
Preceding gene: 238025418
Following gene: 238025416
Centisome position: 92.21
GC content: 77.51
Gene sequence:
>747_bases ATGCAAATCTCGTCGACATTCCCGGGCCGCCGCGTCGCCGCCCACCTTCTCGCTGCGGCCAGTCTTGCCGCGCTGTTCGC GGCAAGCGGCGCGTGCGCCGCGCAGCCGGCCCCCGGCGCCGTGCCGCCCGTGCCCGCGATGCCGCCCGCCGCGGCGGTGC CGCCGCCTCCCCCGGGCGTGGCGCCCGCACCGGACGCCACCCTGGACGCGACCGTGACGCGCTTCGTCACCAATCCGGAC GGCGACATCGACGGTTTCATCGGCGACGGCGGCGCGCTGGTGCGCTTCTCCCCCGGCCTGGGCGCGCGCCTGGCGGCCGA CGTGCGCGTCGGCGATCGGGTGCAGGTGAGCGGCACGCGCGACGGCGCCGGCAATGTCATGGCGCAGCGCGTCGTCGCCG GCAATGGGCGGCAGTTCGTCGATCTGCCGCCGGCCGACGCGTTGCCGCCCCCGCCGCGCGAGGCGCGCGGCATCGCGCTG TCGCGCCTGGGCGTGCAGGGCCGGGTGGCGCACGTCACCACCGCCCCGCGCGGCGAGCCCGACGGCGTGGTGCTGACCGA CGGCACCGTCATCAAGCTCACGCCGCCCGTCGCCCAGCGGTTCGCCACGCTCGTGCAGCCCGGCGCGGAGGTGGCGGCGC AAGGCTACGGCACGCGCAACCGCTACGGCACGGCGCTGCAGGCCACCGCGTTCGGCGCGCCGAACAACCTGACCCGGCTC TACGACGACGCGCCGCCGGCCCCCTGA
Upstream 100 bases:
>100_bases CAGCCCCATGCGCGCGGCGCGCGCCCCACGCGACGGGGCTCGCGCCGGTGGCACGGCGTTTGCATGAGACCTGGCGTGAC TTCTCAAGGAGCGCAACATC
Downstream 100 bases:
>100_bases TCGCGCGGCCCGATTCCCACATTGCTCCCAATTCACAAGGATGATCGACATGCACTGGATCGACCCTGAAAGCCTTCCCG AATCGCGCGGCACGGTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MQISSTFPGRRVAAHLLAAASLAALFAASGACAAQPAPGAVPPVPAMPPAAAVPPPPPGVAPAPDATLDATVTRFVTNPD GDIDGFIGDGGALVRFSPGLGARLAADVRVGDRVQVSGTRDGAGNVMAQRVVAGNGRQFVDLPPADALPPPPREARGIAL SRLGVQGRVAHVTTAPRGEPDGVVLTDGTVIKLTPPVAQRFATLVQPGAEVAAQGYGTRNRYGTALQATAFGAPNNLTRL YDDAPPAP
Sequences:
>Translated_248_residues MQISSTFPGRRVAAHLLAAASLAALFAASGACAAQPAPGAVPPVPAMPPAAAVPPPPPGVAPAPDATLDATVTRFVTNPD GDIDGFIGDGGALVRFSPGLGARLAADVRVGDRVQVSGTRDGAGNVMAQRVVAGNGRQFVDLPPADALPPPPREARGIAL SRLGVQGRVAHVTTAPRGEPDGVVLTDGTVIKLTPPVAQRFATLVQPGAEVAAQGYGTRNRYGTALQATAFGAPNNLTRL YDDAPPAP >Mature_248_residues MQISSTFPGRRVAAHLLAAASLAALFAASGACAAQPAPGAVPPVPAMPPAAAVPPPPPGVAPAPDATLDATVTRFVTNPD GDIDGFIGDGGALVRFSPGLGARLAADVRVGDRVQVSGTRDGAGNVMAQRVVAGNGRQFVDLPPADALPPPPREARGIAL SRLGVQGRVAHVTTAPRGEPDGVVLTDGTVIKLTPPVAQRFATLVQPGAEVAAQGYGTRNRYGTALQATAFGAPNNLTRL YDDAPPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24915; Mature: 24915
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISSTFPGRRVAAHLLAAASLAALFAASGACAAQPAPGAVPPVPAMPPAAAVPPPPPGV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAPDATLDATVTRFVTNPDGDIDGFIGDGGALVRFSPGLGARLAADVRVGDRVQVSGTR CCCCCCCHHHEEEEEEECCCCCCCEEECCCCEEEEECCCCCCEEEEEEECCCEEEECCCC DGAGNVMAQRVVAGNGRQFVDLPPADALPPPPREARGIALSRLGVQGRVAHVTTAPRGEP CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCEEEECCCCCCEEEEEEECCCCCC DGVVLTDGTVIKLTPPVAQRFATLVQPGAEVAAQGYGTRNRYGTALQATAFGAPNNLTRL CCEEEECCEEEEECCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHH YDDAPPAP HCCCCCCC >Mature Secondary Structure MQISSTFPGRRVAAHLLAAASLAALFAASGACAAQPAPGAVPPVPAMPPAAAVPPPPPGV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAPDATLDATVTRFVTNPDGDIDGFIGDGGALVRFSPGLGARLAADVRVGDRVQVSGTR CCCCCCCHHHEEEEEEECCCCCCCEEECCCCEEEEECCCCCCEEEEEEECCCEEEECCCC DGAGNVMAQRVVAGNGRQFVDLPPADALPPPPREARGIALSRLGVQGRVAHVTTAPRGEP CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCEEEECCCCCCEEEEEEECCCCCC DGVVLTDGTVIKLTPPVAQRFATLVQPGAEVAAQGYGTRNRYGTALQATAFGAPNNLTRL CCEEEECCEEEEECCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHH YDDAPPAP HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA