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The map label for this gene is ndoA [H]

Identifier: 238025336

GI number: 238025336

Start: 2498458

End: 2498820

Strand: Reverse

Name: ndoA [H]

Synonym: bglu_2g20100

Alternate gene names: 238025336

Gene position: 2498820-2498458 (Counterclockwise)

Preceding gene: 238025337

Following gene: 238025335

Centisome position: 88.38

GC content: 68.04

Gene sequence:

>363_bases
GTGACGACGGAATGGACCTATGCGGCCGAGACGGCCGCGGTGCGTGAGCAGGGGCTGACGGGCGTGATCGTCGGCGGGCG
CGATATCGCGTTGTTCGCGATCGACGACGAGATCTTCGCGACCGACAACCAGTGCACGCATGGGGAGGCGCGCCTGAGCG
ACGGTTTTCTGCTCGACGATGAAGTCGAGTGCCCCCTGCATCAGGGGCGTTTCAGCGTGCGCACCGGGGCCGCGCTGTGC
GCGCCGGTCACCGCTTGCGTGAAGACGTTCCCGGTGAGGATCGAGTCGGGCCGGGTGTTCGTCCGCTTCGACGCCGGGCT
CGACAATGACGGCCCCGGCGCATCGACGGGAGAGCACGCATGA

Upstream 100 bases:

>100_bases
ACGGCGCACCCCGCACGGGCTGCGCTTCGAGTCGCGCATCTGCGTGTACGACAGCGAGATGGTGCCGAATTCGATCATCT
ATCCGATCTGAGGAGGCAGC

Downstream 100 bases:

>100_bases
GTGCCTATGTGGTGGTGGATGTCGACGTCTACGACGAGGCACGATTTGCCGAGTACCGAAAGCTTGGCGTGCCGACGATC
GCGGCGCACGGCGGCCGCGT

Product: putative ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTTEWTYAAETAAVREQGLTGVIVGGRDIALFAIDDEIFATDNQCTHGEARLSDGFLLDDEVECPLHQGRFSVRTGAALC
APVTACVKTFPVRIESGRVFVRFDAGLDNDGPGASTGEHA

Sequences:

>Translated_120_residues
MTTEWTYAAETAAVREQGLTGVIVGGRDIALFAIDDEIFATDNQCTHGEARLSDGFLLDDEVECPLHQGRFSVRTGAALC
APVTACVKTFPVRIESGRVFVRFDAGLDNDGPGASTGEHA
>Mature_119_residues
TTEWTYAAETAAVREQGLTGVIVGGRDIALFAIDDEIFATDNQCTHGEARLSDGFLLDDEVECPLHQGRFSVRTGAALCA
PVTACVKTFPVRIESGRVFVRFDAGLDNDGPGASTGEHA

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=74, Percent_Identity=47.2972972972973, Blast_Score=80, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 12775; Mature: 12644

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEWTYAAETAAVREQGLTGVIVGGRDIALFAIDDEIFATDNQCTHGEARLSDGFLLDD
CCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEECC
EVECPLHQGRFSVRTGAALCAPVTACVKTFPVRIESGRVFVRFDAGLDNDGPGASTGEHA
CCCCCCCCCEEEECCCCHHHHHHHHHHHHCCEEECCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTEWTYAAETAAVREQGLTGVIVGGRDIALFAIDDEIFATDNQCTHGEARLSDGFLLDD
CCCCCCHHHHHHHHHCCCEEEEECCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEECC
EVECPLHQGRFSVRTGAALCAPVTACVKTFPVRIESGRVFVRFDAGLDNDGPGASTGEHA
CCCCCCCCCEEEECCCCHHHHHHHHHHHHCCEEECCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA