Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238025334
Identifier: 238025334
GI number: 238025334
Start: 2497816
End: 2498133
Strand: Reverse
Name: 238025334
Synonym: bglu_2g20080
Alternate gene names: NA
Gene position: 2498133-2497816 (Counterclockwise)
Preceding gene: 238025335
Following gene: 238025333
Centisome position: 88.36
GC content: 68.87
Gene sequence:
>318_bases ATGACGGCATATATCGTGTTTGACATCGACGTTCACGACGCAAGCGGCTACGAGCAGTACCGGGAGATCGGCGCGCCGAC CGTCGCGCAGTTCGGCGGGCGCTTCCTGGTGCGAGGCGGCGAGGCCGCGACGCTGGAGGGCGGCTGGTCGCCCCGCCGCA TCGTGGTGCTCGAATTCGATTCGATCGACCGCGCGAAGGCGTGGTACGAGTCCGATGCTTATCGTCGTGCGCGGGACATT CGCGAGCGCACCGCCCGCACCACGGGCATCATCGTGCAGGGCGCGGCGCAGGTGGCCGCGGCGGGAGAGCGGGGATGA
Upstream 100 bases:
>100_bases GCAAGGCAGCTGCGGCTCGAGGCAGCCGATACCCACAGTATCGCGCTCGCGAGCCTGTGAGGCCGAGCCTCGGCCCTGCC GGACCCAGTGGAGAGAAGAC
Downstream 100 bases:
>100_bases GCAGGACCACTTCGGCGACACGCGTCGCGATCGTCGGCGCGGGTATCGGCGGGTGCGCGCTTGGCGCGATGCTGCAACGG ATCGGCTATGCCGTGTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MTAYIVFDIDVHDASGYEQYREIGAPTVAQFGGRFLVRGGEAATLEGGWSPRRIVVLEFDSIDRAKAWYESDAYRRARDI RERTARTTGIIVQGAAQVAAAGERG
Sequences:
>Translated_105_residues MTAYIVFDIDVHDASGYEQYREIGAPTVAQFGGRFLVRGGEAATLEGGWSPRRIVVLEFDSIDRAKAWYESDAYRRARDI RERTARTTGIIVQGAAQVAAAGERG >Mature_104_residues TAYIVFDIDVHDASGYEQYREIGAPTVAQFGGRFLVRGGEAATLEGGWSPRRIVVLEFDSIDRAKAWYESDAYRRARDIR ERTARTTGIIVQGAAQVAAAGERG
Specific function: Unknown
COG id: COG5470
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11582; Mature: 11451
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYIVFDIDVHDASGYEQYREIGAPTVAQFGGRFLVRGGEAATLEGGWSPRRIVVLEFD CEEEEEEEEEECCCCCHHHHHHCCCCHHHHCCCEEEEECCCEEEECCCCCCCEEEEEEEC SIDRAKAWYESDAYRRARDIRERTARTTGIIVQGAAQVAAAGERG CCCCHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCHHEECCCCCC >Mature Secondary Structure TAYIVFDIDVHDASGYEQYREIGAPTVAQFGGRFLVRGGEAATLEGGWSPRRIVVLEFD EEEEEEEEEECCCCCHHHHHHCCCCHHHHCCCEEEEECCCEEEECCCCCCCEEEEEEEC SIDRAKAWYESDAYRRARDIRERTARTTGIIVQGAAQVAAAGERG CCCCHHHHHCCHHHHHHHHHHHHHHHHCCEEEECCHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA