Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025302
Identifier: 238025302
GI number: 238025302
Start: 2456576
End: 2457676
Strand: Reverse
Name: 238025302
Synonym: bglu_2g19760
Alternate gene names: NA
Gene position: 2457676-2456576 (Counterclockwise)
Preceding gene: 238025303
Following gene: 238025301
Centisome position: 86.93
GC content: 66.12
Gene sequence:
>1101_bases ATGACGGCGCGCGCCGACCGGACGATCGATATGAAACGCGAAATCGTACAAGCCACCAACCGCTGCCGCAGCGAGATCCT CGCCGGCGGTTTTCGTAGCGACGTCGCGCGCATCGCGCAATGTGCGCGCGCGCACCTCGGCGACTACGCCGACAACCCGC ACGTGCGTGCGCTGCTCGTCACGCTGGAGAATCGCCGCCTTGCCTCGGGCGCGCTGCTCGACCTCACCTACTCGGTGGAC CCGAGCTTCATCCTCGGGTTCTTCGACGTGCCGTACAACGCCGACGCGTTCCTCGAAGCCGCCGCGATCGCGCCGGTGCC GATTCCGCCGAGCGTGCTGGCGATCGCGCCGGACGGCAACGCGCTGCCGGTGCAGATCCGCATGTGCACGGACGGCTTTC GCAATCCGCTCGCGGTGGCGGTGTTCGGCGAGAACTTCATCGACGCCGAGCTGTGCGCGTATCACAAGGCGTACTACTTC ATCGACAAGTTCGTCGAACGCTTCAAGCGCTACACGCGCCCGGCGATCGAGGCGCACTGGTCGCCTACCGCGTTCCCGGA CCTGATCGCGGCGGACGACACGCTGCTGACGCAGGCCAGCGCGATCTGGGTCCATCTGCACGAGTATCACCATCGCACCG GCTTCCTGCCGATCCCGGAGCACCTCGAGGCGAAGAGCACGCGCAACGGCGCGGGCGCGGAAGAACTGCGCGTGGACATC CTGTCGATCCTCGCGCTGTTCCGGCTGGGCTCGGACGACCGCCTGCTGCGTGCGTCGATACAGTACATCCTGGCCGAGCG CCTGATCCGCTATCCCCTGCAGGCGCCGCCGCTCGACAACTACGACGCCCGCTCGTCGGTCGCGCTGTTTCATTACCTGT CCCGCCACGGCGTTATCGCGCAGCGTGGCGGCACGTTCTATTTCGAAGGCGGCTACGAGCGTCTGACCCAGGCGCTCAGG TCCATCGTGATCAAGCTGACGGCGCTGGAATACCAGCTCAGCGTTTCGTCCGAGCTCGACCGGAGAAAGGTCCTGTCGTT CGTGTTGCCGACGCTTGCCAAGAACGACAACAACTGGGGCGCAGCCGGACAGCCGCACTGA
Upstream 100 bases:
>100_bases CGGCGACGCACGAGCTGCTGGTGGGCGAAGTGGTGGCGCTGCGCTGCGCGGCGCCCGACGACGAGGCGCTCGTCTATCTG CAGCGCGAATTCCGCGCCGT
Downstream 100 bases:
>100_bases CGGCAGCCCGCCCGTTTTTCCGAACCGAATCTATCGAGAGCCAAGATGCCCATCTATCGTTCACGCACTTCCACCCACGG CCGCAACATGGCCGGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTARADRTIDMKREIVQATNRCRSEILAGGFRSDVARIAQCARAHLGDYADNPHVRALLVTLENRRLASGALLDLTYSVD PSFILGFFDVPYNADAFLEAAAIAPVPIPPSVLAIAPDGNALPVQIRMCTDGFRNPLAVAVFGENFIDAELCAYHKAYYF IDKFVERFKRYTRPAIEAHWSPTAFPDLIAADDTLLTQASAIWVHLHEYHHRTGFLPIPEHLEAKSTRNGAGAEELRVDI LSILALFRLGSDDRLLRASIQYILAERLIRYPLQAPPLDNYDARSSVALFHYLSRHGVIAQRGGTFYFEGGYERLTQALR SIVIKLTALEYQLSVSSELDRRKVLSFVLPTLAKNDNNWGAAGQPH
Sequences:
>Translated_366_residues MTARADRTIDMKREIVQATNRCRSEILAGGFRSDVARIAQCARAHLGDYADNPHVRALLVTLENRRLASGALLDLTYSVD PSFILGFFDVPYNADAFLEAAAIAPVPIPPSVLAIAPDGNALPVQIRMCTDGFRNPLAVAVFGENFIDAELCAYHKAYYF IDKFVERFKRYTRPAIEAHWSPTAFPDLIAADDTLLTQASAIWVHLHEYHHRTGFLPIPEHLEAKSTRNGAGAEELRVDI LSILALFRLGSDDRLLRASIQYILAERLIRYPLQAPPLDNYDARSSVALFHYLSRHGVIAQRGGTFYFEGGYERLTQALR SIVIKLTALEYQLSVSSELDRRKVLSFVLPTLAKNDNNWGAAGQPH >Mature_365_residues TARADRTIDMKREIVQATNRCRSEILAGGFRSDVARIAQCARAHLGDYADNPHVRALLVTLENRRLASGALLDLTYSVDP SFILGFFDVPYNADAFLEAAAIAPVPIPPSVLAIAPDGNALPVQIRMCTDGFRNPLAVAVFGENFIDAELCAYHKAYYFI DKFVERFKRYTRPAIEAHWSPTAFPDLIAADDTLLTQASAIWVHLHEYHHRTGFLPIPEHLEAKSTRNGAGAEELRVDIL SILALFRLGSDDRLLRASIQYILAERLIRYPLQAPPLDNYDARSSVALFHYLSRHGVIAQRGGTFYFEGGYERLTQALRS IVIKLTALEYQLSVSSELDRRKVLSFVLPTLAKNDNNWGAAGQPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40863; Mature: 40732
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARADRTIDMKREIVQATNRCRSEILAGGFRSDVARIAQCARAHLGDYADNPHVRALLV CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE TLENRRLASGALLDLTYSVDPSFILGFFDVPYNADAFLEAAAIAPVPIPPSVLAIAPDGN EECCCEECCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCC ALPVQIRMCTDGFRNPLAVAVFGENFIDAELCAYHKAYYFIDKFVERFKRYTRPAIEAHW EEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC SPTAFPDLIAADDTLLTQASAIWVHLHEYHHRTGFLPIPEHLEAKSTRNGAGAEELRVDI CCCCCCHHHCCCCHHHHHHHHHEEEHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHH LSILALFRLGSDDRLLRASIQYILAERLIRYPLQAPPLDNYDARSSVALFHYLSRHGVIA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEE QRGGTFYFEGGYERLTQALRSIVIKLTALEYQLSVSSELDRRKVLSFVLPTLAKNDNNWG ECCCEEEEECCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHCCCCCCC AAGQPH CCCCCC >Mature Secondary Structure TARADRTIDMKREIVQATNRCRSEILAGGFRSDVARIAQCARAHLGDYADNPHVRALLV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE TLENRRLASGALLDLTYSVDPSFILGFFDVPYNADAFLEAAAIAPVPIPPSVLAIAPDGN EECCCEECCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCC ALPVQIRMCTDGFRNPLAVAVFGENFIDAELCAYHKAYYFIDKFVERFKRYTRPAIEAHW EEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC SPTAFPDLIAADDTLLTQASAIWVHLHEYHHRTGFLPIPEHLEAKSTRNGAGAEELRVDI CCCCCCHHHCCCCHHHHHHHHHEEEHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHH LSILALFRLGSDDRLLRASIQYILAERLIRYPLQAPPLDNYDARSSVALFHYLSRHGVIA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEE QRGGTFYFEGGYERLTQALRSIVIKLTALEYQLSVSSELDRRKVLSFVLPTLAKNDNNWG ECCCEEEEECCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHCCCCCCC AAGQPH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA