Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is phnX [H]
Identifier: 238025283
GI number: 238025283
Start: 2431740
End: 2432603
Strand: Reverse
Name: phnX [H]
Synonym: bglu_2g19570
Alternate gene names: 238025283
Gene position: 2432603-2431740 (Counterclockwise)
Preceding gene: 238025285
Following gene: 238025281
Centisome position: 86.04
GC content: 75.93
Gene sequence:
>864_bases ATGCCGCAACGATCCGCCCGCCTGGGCGCGTGCCCCCCACCGCGCCCGAGCCGCGCCTATCGCGGCCCGGTCACCACCGC GATCTTCGACTGGGCCGGCACGGTGCTCGATTTCGGCTGCCTCGCGCCGGTCCGGGCGTTTCGCGAGGTGTTCGAGGCGG CCGGCGTGCCGATCAGCGAGGCCGAGGCGCGCGCGCCGATGGGCGCCGCCAAGCGCGAGCACATCGAGCGGATCCTCGCG GACGCCGCCGTGCAGGCGCGCTGGCGCGCCGCACGCGGCGCGGCCCCGACCGATGCCGACGTCGGCGCGCTCTACGCCGC GTTCCTGAGCGCCGACGAGCGCAACCTCGAGCGCTACAGCGACCTGATCCCAGGCGCGCTCGACACGGTCGCGAGGCTGC GCGCGCACGGCATCCGAATCGGCAGCACCACGGGCTATCCGCGCGAGGTCATGAACCGCCTCGCGCCGCTGGCGGCACGC CTCGGTTATCGCCCCGACCACTGCTGCACGGTCAGCGACGTCGCGCGCGGCCGCCCGTTCCCGGACATGTGCCTGGCCAA CGCGCTCGCGCTTGGCGCGCCCGACGTGCGCGGCTGCGTGGTGGTGGACGATAGCCCGAGCGGTCTCGCGTCGGGTCTCG CGGCCGGCATGTGGGCGGTGGGCGTGGCGGCGAGCGGCAACGAGGTGGGGCTCTCGCTGGCCGACTGGCACGCGCTCGAC GCCGACGCCCGCGCCGTGCGCGTCGGCCCGGCGCGCGAGCGTCTCGAGCAGGCGGGCGCGCACTACGTGATCGACAGCAT CGCCGACCTGCCGGGCGTGATCGCCGCGATCGGCGAGCGCCTCGCCGCCGAAGCGCCGGCATGA
Upstream 100 bases:
>100_bases TCGTTGAACAAAGCGGTTTTCACCGGGTATTTCGATCATGGACCGGTCATGTTGCAAATTTATGCTGCCGTCCGTGATCC ACCGTTTCCCGGAGCCGAGC
Downstream 100 bases:
>100_bases GCGGCGCGGCCGGCCGGCGCTTCCACACCGGTTCGGCCGACGCCGCCGGCCGGACGCCGCGTGCGGCGACGCTGCCGTGA GGCGCGCGGGCGGCCGCGAA
Product: phosphonoacetaldehyde hydrolase
Products: NA
Alternate protein names: Phosphonatase; Phosphonoacetaldehyde phosphonohydrolase [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPQRSARLGACPPPRPSRAYRGPVTTAIFDWAGTVLDFGCLAPVRAFREVFEAAGVPISEAEARAPMGAAKREHIERILA DAAVQARWRAARGAAPTDADVGALYAAFLSADERNLERYSDLIPGALDTVARLRAHGIRIGSTTGYPREVMNRLAPLAAR LGYRPDHCCTVSDVARGRPFPDMCLANALALGAPDVRGCVVVDDSPSGLASGLAAGMWAVGVAASGNEVGLSLADWHALD ADARAVRVGPARERLEQAGAHYVIDSIADLPGVIAAIGERLAAEAPA
Sequences:
>Translated_287_residues MPQRSARLGACPPPRPSRAYRGPVTTAIFDWAGTVLDFGCLAPVRAFREVFEAAGVPISEAEARAPMGAAKREHIERILA DAAVQARWRAARGAAPTDADVGALYAAFLSADERNLERYSDLIPGALDTVARLRAHGIRIGSTTGYPREVMNRLAPLAAR LGYRPDHCCTVSDVARGRPFPDMCLANALALGAPDVRGCVVVDDSPSGLASGLAAGMWAVGVAASGNEVGLSLADWHALD ADARAVRVGPARERLEQAGAHYVIDSIADLPGVIAAIGERLAAEAPA >Mature_286_residues PQRSARLGACPPPRPSRAYRGPVTTAIFDWAGTVLDFGCLAPVRAFREVFEAAGVPISEAEARAPMGAAKREHIERILAD AAVQARWRAARGAAPTDADVGALYAAFLSADERNLERYSDLIPGALDTVARLRAHGIRIGSTTGYPREVMNRLAPLAARL GYRPDHCCTVSDVARGRPFPDMCLANALALGAPDVRGCVVVDDSPSGLASGLAAGMWAVGVAASGNEVGLSLADWHALDA DARAVRVGPARERLEQAGAHYVIDSIADLPGVIAAIGERLAAEAPA
Specific function: Involved in phosphonate degradation [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PhnX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR006323 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.11.1.1 [H]
Molecular weight: Translated: 30033; Mature: 29902
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQRSARLGACPPPRPSRAYRGPVTTAIFDWAGTVLDFGCLAPVRAFREVFEAAGVPISE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AEARAPMGAAKREHIERILADAAVQARWRAARGAAPTDADVGALYAAFLSADERNLERYS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHH DLIPGALDTVARLRAHGIRIGSTTGYPREVMNRLAPLAARLGYRPDHCCTVSDVARGRPF HHCCHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCC PDMCLANALALGAPDVRGCVVVDDSPSGLASGLAAGMWAVGVAASGNEVGLSLADWHALD HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHCC ADARAVRVGPARERLEQAGAHYVIDSIADLPGVIAAIGERLAAEAPA CCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PQRSARLGACPPPRPSRAYRGPVTTAIFDWAGTVLDFGCLAPVRAFREVFEAAGVPISE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AEARAPMGAAKREHIERILADAAVQARWRAARGAAPTDADVGALYAAFLSADERNLERYS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHH DLIPGALDTVARLRAHGIRIGSTTGYPREVMNRLAPLAARLGYRPDHCCTVSDVARGRPF HHCCHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCC PDMCLANALALGAPDVRGCVVVDDSPSGLASGLAAGMWAVGVAASGNEVGLSLADWHALD HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHCC ADARAVRVGPARERLEQAGAHYVIDSIADLPGVIAAIGERLAAEAPA CCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA