Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is mmlH [H]
Identifier: 238025234
GI number: 238025234
Start: 2375961
End: 2377259
Strand: Reverse
Name: mmlH [H]
Synonym: bglu_2g19060
Alternate gene names: 238025234
Gene position: 2377259-2375961 (Counterclockwise)
Preceding gene: 238025239
Following gene: 238025233
Centisome position: 84.08
GC content: 71.67
Gene sequence:
>1299_bases ATGCGCTGGTACCGGGACATCCCACCCGCCGAGAAACGCACGCTCCGGGCCTGCTTCGCGGGCTGGGCGGTGGACGCGGC CGATACGCAGATCTTTTCGCTGGTGATCCCGACGCTGCTGACGGTATGGGGCATCAGCAAGGGGCAGGCCGGCCTGATCG GCGGCGCCACGCTGGTGGCCGGCGCGCTGGGCGGGCTGCTGGCCGGCATGCTGTCGGATCGGGTGGGCCGCGTGCGCGCG CTGCAGGTCACCGTGCTCTGGTTTTCGCTGTTCACCTTCCTGAGCGCGTTCGCGCAGAACTTCGAGCAGTTGCTCGCGCT GAAGGCGCTGCAGGGCATCGGCTTCGGCGGCGAATGGACGGCCGGTGCGGTGCTGCTCAGCGAAACCATCGACGCGCGGC ATCGCGGCAAGGCGATGGGCATCGTGCAGAGCGCCTGGGGCTTCGGCTGGGGCGCCGCGGTGCTGCTCTATACGGCGATG TTCTCGTTCGTCTCGCAGGAGTGGGCGTGGCGGCTGCTGTTCGCGGTGGGCGTGGCGCCCGCGCTGCTGGTGCTGTATCT GCGCCGCAAGGTGGCCGAGCCGCCGCGCGAGCGGGCCGCCGCGCGCGAGGCCGGGCGGCCCGGCGTGCTGGCGACGGCGG CCGGCATCTTCGCGCCGGCGGTGCTGCGCACGACGGTGGTGGGCGGGCTGATCGGGCTGGGCGCGCATGGCGGCTATTAC GCGGTCACCACCTGGCTGCCGACCTACCTGAAGACCGAGCGCCATCTGTCGGTGCTCGGCACGGGCGGCTACCTGGCGGT GGTGATCGTCGCGTTCATCGCCGGCTGCTTCGCGAGCGCCTGGCTGCAGGACCGCATCGGCCGCCGCCGGACCGTGATCG TGTTCGCGATCGGCTGCACGGTGATGGTCAATCTCTACACGCGCCTGCCGATCGGTGACACCGCCATGCTGATCCTGAGC TTCCCGCTTGGGCTGCTTTCGGCCGGCATCCCGGCCGCGCTCGGCGCGCTGTTCAACGAACTCTATCCGCAGGGCGTGCG CGGCACCGGCGTGGGTTTTTGCTACAACTTCGGGCGCATCGTCTCGGCCGGCTTTCCGGTCCTGATCGGCCACATGAGCA GCACGATGTCGCTCGGCACCGCGCTTGGCATCGATGCCGGCCTGGCCTATGGGCTGGTCGTGGTCGCCGCGCTGCTGCTG CCCGAGACGCGCGGGCGCCGCATCGCCGCGCCGCTGCCCGGCGGCTCGCGCGCCGGCCCGCAAGGCGCGAGCCCCGCCAC GCCGGTCGAACCCACCTGA
Upstream 100 bases:
>100_bases ATAGTATGCACGGCACTGCGTCCCGCACCAGAATGCGTACCATCATTCAATCGCGGTCGGGCGCCGGCGTGCCGCCACGA TACGCACAAGGAGACGAGTC
Downstream 100 bases:
>100_bases TCGCGAATACATGAAGACGACGCATCCGGCTTTGCCGCCGCTTGCCGAGGCCGGCCTGTCGGCCGCGGGCGCGGCCTGGC TCGCCGCCGGCGCGCCGGCC
Product: major facilitator superfamily transporter
Products: Proton [Cytoplasm]; N-acetylneuraminate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MRWYRDIPPAEKRTLRACFAGWAVDAADTQIFSLVIPTLLTVWGISKGQAGLIGGATLVAGALGGLLAGMLSDRVGRVRA LQVTVLWFSLFTFLSAFAQNFEQLLALKALQGIGFGGEWTAGAVLLSETIDARHRGKAMGIVQSAWGFGWGAAVLLYTAM FSFVSQEWAWRLLFAVGVAPALLVLYLRRKVAEPPRERAAAREAGRPGVLATAAGIFAPAVLRTTVVGGLIGLGAHGGYY AVTTWLPTYLKTERHLSVLGTGGYLAVVIVAFIAGCFASAWLQDRIGRRRTVIVFAIGCTVMVNLYTRLPIGDTAMLILS FPLGLLSAGIPAALGALFNELYPQGVRGTGVGFCYNFGRIVSAGFPVLIGHMSSTMSLGTALGIDAGLAYGLVVVAALLL PETRGRRIAAPLPGGSRAGPQGASPATPVEPT
Sequences:
>Translated_432_residues MRWYRDIPPAEKRTLRACFAGWAVDAADTQIFSLVIPTLLTVWGISKGQAGLIGGATLVAGALGGLLAGMLSDRVGRVRA LQVTVLWFSLFTFLSAFAQNFEQLLALKALQGIGFGGEWTAGAVLLSETIDARHRGKAMGIVQSAWGFGWGAAVLLYTAM FSFVSQEWAWRLLFAVGVAPALLVLYLRRKVAEPPRERAAAREAGRPGVLATAAGIFAPAVLRTTVVGGLIGLGAHGGYY AVTTWLPTYLKTERHLSVLGTGGYLAVVIVAFIAGCFASAWLQDRIGRRRTVIVFAIGCTVMVNLYTRLPIGDTAMLILS FPLGLLSAGIPAALGALFNELYPQGVRGTGVGFCYNFGRIVSAGFPVLIGHMSSTMSLGTALGIDAGLAYGLVVVAALLL PETRGRRIAAPLPGGSRAGPQGASPATPVEPT >Mature_432_residues MRWYRDIPPAEKRTLRACFAGWAVDAADTQIFSLVIPTLLTVWGISKGQAGLIGGATLVAGALGGLLAGMLSDRVGRVRA LQVTVLWFSLFTFLSAFAQNFEQLLALKALQGIGFGGEWTAGAVLLSETIDARHRGKAMGIVQSAWGFGWGAAVLLYTAM FSFVSQEWAWRLLFAVGVAPALLVLYLRRKVAEPPRERAAAREAGRPGVLATAAGIFAPAVLRTTVVGGLIGLGAHGGYY AVTTWLPTYLKTERHLSVLGTGGYLAVVIVAFIAGCFASAWLQDRIGRRRTVIVFAIGCTVMVNLYTRLPIGDTAMLILS FPLGLLSAGIPAALGALFNELYPQGVRGTGVGFCYNFGRIVSAGFPVLIGHMSSTMSLGTALGIDAGLAYGLVVVAALLL PETRGRRIAAPLPGGSRAGPQGASPATPVEPT
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=439, Percent_Identity=25.5125284738041, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI213021148, Length=439, Percent_Identity=24.6013667425968, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI4507005, Length=443, Percent_Identity=24.6049661399549, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI87082231, Length=459, Percent_Identity=26.1437908496732, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI87082404, Length=383, Percent_Identity=22.1932114882507, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI87082159, Length=333, Percent_Identity=29.1291291291291, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1790550, Length=393, Percent_Identity=26.2086513994911, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI87081723, Length=398, Percent_Identity=27.8894472361809, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1786229, Length=388, Percent_Identity=23.7113402061856, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1788292, Length=372, Percent_Identity=25, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI32564663, Length=438, Percent_Identity=24.6575342465753, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI19922874, Length=377, Percent_Identity=22.2811671087533, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45389; Mature: 45389
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWYRDIPPAEKRTLRACFAGWAVDAADTQIFSLVIPTLLTVWGISKGQAGLIGGATLVA CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH GALGGLLAGMLSDRVGRVRALQVTVLWFSLFTFLSAFAQNFEQLLALKALQGIGFGGEWT HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH AGAVLLSETIDARHRGKAMGIVQSAWGFGWGAAVLLYTAMFSFVSQEWAWRLLFAVGVAP HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLVLYLRRKVAEPPRERAAAREAGRPGVLATAAGIFAPAVLRTTVVGGLIGLGAHGGYY HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE AVTTWLPTYLKTERHLSVLGTGGYLAVVIVAFIAGCFASAWLQDRIGRRRTVIVFAIGCT EHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHH VMVNLYTRLPIGDTAMLILSFPLGLLSAGIPAALGALFNELYPQGVRGTGVGFCYNFGRI HHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH VSAGFPVLIGHMSSTMSLGTALGIDAGLAYGLVVVAALLLPETRGRRIAAPLPGGSRAGP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC QGASPATPVEPT CCCCCCCCCCCC >Mature Secondary Structure MRWYRDIPPAEKRTLRACFAGWAVDAADTQIFSLVIPTLLTVWGISKGQAGLIGGATLVA CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH GALGGLLAGMLSDRVGRVRALQVTVLWFSLFTFLSAFAQNFEQLLALKALQGIGFGGEWT HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH AGAVLLSETIDARHRGKAMGIVQSAWGFGWGAAVLLYTAMFSFVSQEWAWRLLFAVGVAP HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLVLYLRRKVAEPPRERAAAREAGRPGVLATAAGIFAPAVLRTTVVGGLIGLGAHGGYY HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE AVTTWLPTYLKTERHLSVLGTGGYLAVVIVAFIAGCFASAWLQDRIGRRRTVIVFAIGCT EHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHH VMVNLYTRLPIGDTAMLILSFPLGLLSAGIPAALGALFNELYPQGVRGTGVGFCYNFGRI HHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH VSAGFPVLIGHMSSTMSLGTALGIDAGLAYGLVVVAALLLPETRGRRIAAPLPGGSRAGP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC QGASPATPVEPT CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; N-acetylneuraminate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + N-acetylneuraminate [Periplasm] = Proton [Cytoplasm] + N-acetylneuraminate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]