Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025224
Identifier: 238025224
GI number: 238025224
Start: 2364404
End: 2365741
Strand: Reverse
Name: 238025224
Synonym: bglu_2g18950
Alternate gene names: NA
Gene position: 2365741-2364404 (Counterclockwise)
Preceding gene: 238025225
Following gene: 238025223
Centisome position: 83.67
GC content: 71.08
Gene sequence:
>1338_bases ATGGCACAGGCACTGGGGATCGAACGTCACGCGTTCGGCGGCGCGCGCAGCGCGAAGGTATTGCTTTACGCGGCCGGCAT CCTGCTGGTGGCGGAATGGATCGGCGCGTTCGCGTTCAAGGTGGGACCGGGCAAGGTGGTGCTGCTGCCGATGATCTGGG CGCTGCTGCTGGGGGCCGCGCTCGGGCTGGCGGGCTCGCGCTGGCGCAGCGCCGCGCGGCTCGACGTGTCGGATCAGTTC TTCGCGGCGGCGATCCTGCAGCCGGCGCTGCTGCTGTTCGTCTCGAAGCTGGGGCTGATGGTGGGCAGCGCGCTGCCGAA GCTCGCCGCGGCCGGCTGGGCGCTCGCGTTCCAGGAGTTCGGCCACTTCGTCGGCACGCTGCTGCTGGGCCTGCCGCTCG CGCTCGTGCTCGGCATCAAGCGCGAGGCGATCGGCGCGACCTTCTCGGTGGGCCGCGAGCCGAGCCTCGCCATCATCGGC GAGAAGTACGGAATGGATTCGGCCGAGGGCCGCGGCGTGCTGGCCGAATACCTGACCGGCACCGTGTTCGGCGCCGTGTT CATCGCGATCTTCGCCGGCTTCGTCACGAGCCTCGGCATCTTCGATCCGCTCGCGCTGGCGATGGGCTCGGGCGTCGGCT CGGGCAGCATGATGGCGGCGGCCTCGGGCGCGATCGCCGCGCAGCAGGACGCGCAGACGGCCAAGGCGGTGCTCGCGTTC GCGGCGGCCAGCAACCTGATCACCACCACCATCGGCACCTACTTCACGCTGTTCATCTCGCTGCCGCTCGCGGTGTGGGG CTATCGCGTGCTCGAGCCGCTGATCGGCCGCACCACGAAGGCGTCGCGCCAGGCCGCGGCCGATGCGGCGCCCGCGCTCG GCGAGGTGCGCACCGAGGCGCCGAAGCTCGGCTATGGCGGCTATCTGCTGGCGTGGGTCGCGACGGCCGCGATGGCGCTC GTCTGCGACTGGATCACCCATGGCACCACGCCGCTCGCCGGCCTGCCCGGGATCGCCATCATGGTGGCCGCGACGATCGT GGGCGAGGCGCTCGCGCGCGTGACCGGGCGCCGGATTCCGGCCGTCTGCTGGGTATCGGTGGTGGCGATGTTCCTGACCT CGCCGTGGTGCCCGTGGGCCACGCAGATCGCCGGGTTCAGCTCGCACAACGATTTCCTCGGCGTGACCACGCCGATGCTC GCGTTCGCCGGCCTGTCGATCGCCAAGGACATCCCGGCGTTCCGCCGGCTCGGCTGGCGCATCGTGGTGGTGTCGTTCGT CGCGAACGCCGGCACCTTCCTCGGTGCCACGCTGGTCGCGCAGCTGTTCCACATCTGA
Upstream 100 bases:
>100_bases GCGTGTGGGTCGAGACGGCCGAGGCGCCGCCCACCGCGTTCGGATATCTGTAAAACGGCCCGGCTTCGCGACGGAGGCCG GGCGCATCGGGAGACGGAAG
Downstream 100 bases:
>100_bases GCGGCCGCCCGGCAAGACCTCAAGGACTCCCGCATGAAACTGATCGAATCCATCCAGGCCGACGCGGCCGAACTGCAGGC GATCCGCCGCGACATCCACG
Product: ABC-type branched-chain amino acid transporter, permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MAQALGIERHAFGGARSAKVLLYAAGILLVAEWIGAFAFKVGPGKVVLLPMIWALLLGAALGLAGSRWRSAARLDVSDQF FAAAILQPALLLFVSKLGLMVGSALPKLAAAGWALAFQEFGHFVGTLLLGLPLALVLGIKREAIGATFSVGREPSLAIIG EKYGMDSAEGRGVLAEYLTGTVFGAVFIAIFAGFVTSLGIFDPLALAMGSGVGSGSMMAAASGAIAAQQDAQTAKAVLAF AAASNLITTTIGTYFTLFISLPLAVWGYRVLEPLIGRTTKASRQAAADAAPALGEVRTEAPKLGYGGYLLAWVATAAMAL VCDWITHGTTPLAGLPGIAIMVAATIVGEALARVTGRRIPAVCWVSVVAMFLTSPWCPWATQIAGFSSHNDFLGVTTPML AFAGLSIAKDIPAFRRLGWRIVVVSFVANAGTFLGATLVAQLFHI
Sequences:
>Translated_445_residues MAQALGIERHAFGGARSAKVLLYAAGILLVAEWIGAFAFKVGPGKVVLLPMIWALLLGAALGLAGSRWRSAARLDVSDQF FAAAILQPALLLFVSKLGLMVGSALPKLAAAGWALAFQEFGHFVGTLLLGLPLALVLGIKREAIGATFSVGREPSLAIIG EKYGMDSAEGRGVLAEYLTGTVFGAVFIAIFAGFVTSLGIFDPLALAMGSGVGSGSMMAAASGAIAAQQDAQTAKAVLAF AAASNLITTTIGTYFTLFISLPLAVWGYRVLEPLIGRTTKASRQAAADAAPALGEVRTEAPKLGYGGYLLAWVATAAMAL VCDWITHGTTPLAGLPGIAIMVAATIVGEALARVTGRRIPAVCWVSVVAMFLTSPWCPWATQIAGFSSHNDFLGVTTPML AFAGLSIAKDIPAFRRLGWRIVVVSFVANAGTFLGATLVAQLFHI >Mature_444_residues AQALGIERHAFGGARSAKVLLYAAGILLVAEWIGAFAFKVGPGKVVLLPMIWALLLGAALGLAGSRWRSAARLDVSDQFF AAAILQPALLLFVSKLGLMVGSALPKLAAAGWALAFQEFGHFVGTLLLGLPLALVLGIKREAIGATFSVGREPSLAIIGE KYGMDSAEGRGVLAEYLTGTVFGAVFIAIFAGFVTSLGIFDPLALAMGSGVGSGSMMAAASGAIAAQQDAQTAKAVLAFA AASNLITTTIGTYFTLFISLPLAVWGYRVLEPLIGRTTKASRQAAADAAPALGEVRTEAPKLGYGGYLLAWVATAAMALV CDWITHGTTPLAGLPGIAIMVAATIVGEALARVTGRRIPAVCWVSVVAMFLTSPWCPWATQIAGFSSHNDFLGVTTPMLA FAGLSIAKDIPAFRRLGWRIVVVSFVANAGTFLGATLVAQLFHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46053; Mature: 45922
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQALGIERHAFGGARSAKVLLYAAGILLVAEWIGAFAFKVGPGKVVLLPMIWALLLGAA CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHH LGLAGSRWRSAARLDVSDQFFAAAILQPALLLFVSKLGLMVGSALPKLAAAGWALAFQEF HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHFVGTLLLGLPLALVLGIKREAIGATFSVGREPSLAIIGEKYGMDSAEGRGVLAEYLTG HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHH TVFGAVFIAIFAGFVTSLGIFDPLALAMGSGVGSGSMMAAASGAIAAQQDAQTAKAVLAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHH AAASNLITTTIGTYFTLFISLPLAVWGYRVLEPLIGRTTKASRQAAADAAPALGEVRTEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHCC PKLGYGGYLLAWVATAAMALVCDWITHGTTPLAGLPGIAIMVAATIVGEALARVTGRRIP CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH AVCWVSVVAMFLTSPWCPWATQIAGFSSHNDFLGVTTPMLAFAGLSIAKDIPAFRRLGWR HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCHH IVVVSFVANAGTFLGATLVAQLFHI HHHHHHHHHCHHHHHHHHHHHHHCC >Mature Secondary Structure AQALGIERHAFGGARSAKVLLYAAGILLVAEWIGAFAFKVGPGKVVLLPMIWALLLGAA CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHH LGLAGSRWRSAARLDVSDQFFAAAILQPALLLFVSKLGLMVGSALPKLAAAGWALAFQEF HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHFVGTLLLGLPLALVLGIKREAIGATFSVGREPSLAIIGEKYGMDSAEGRGVLAEYLTG HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHH TVFGAVFIAIFAGFVTSLGIFDPLALAMGSGVGSGSMMAAASGAIAAQQDAQTAKAVLAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHH AAASNLITTTIGTYFTLFISLPLAVWGYRVLEPLIGRTTKASRQAAADAAPALGEVRTEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHCC PKLGYGGYLLAWVATAAMALVCDWITHGTTPLAGLPGIAIMVAATIVGEALARVTGRRIP CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH AVCWVSVVAMFLTSPWCPWATQIAGFSSHNDFLGVTTPMLAFAGLSIAKDIPAFRRLGWR HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCHH IVVVSFVANAGTFLGATLVAQLFHI HHHHHHHHHCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA