Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025200
Identifier: 238025200
GI number: 238025200
Start: 2331861
End: 2332214
Strand: Reverse
Name: 238025200
Synonym: bglu_2g18710
Alternate gene names: NA
Gene position: 2332214-2331861 (Counterclockwise)
Preceding gene: 238025201
Following gene: 238025199
Centisome position: 82.49
GC content: 71.19
Gene sequence:
>354_bases ATGAGTTTCAGCATGAACGAAAAGCCCATGTCCTGTCCGCGCCCCGACGCGCCGCGCCGTGCCGACGGCATCGTGTTCCA CCTGGCGCTCGGCGACAGCTGGATCGAGACGGTCGGCGTGCCGTTCGAATGCCGCGGCCGCGTCTGGGCGGTCCACCGCT CGCCGCTGGTGGCGCCCGACAGCCACCCTCGCTACACCGTGTCCGACGTCGAGACGGGACGCAGCTTCCGCCGCGTGCTC GAGCCCACCATCGAGGCCGCGCGCGCCGCGGCGATCGGCGTGATCGCCACCATGCCGCCGCCCGTGTGGAACAAGATGGT CCGCTCGCGCGACCATGCGCAGGTGGCGGCATGA
Upstream 100 bases:
>100_bases GCCCAGCCATGAGCCCCGGCTTTTGCCGCCGCATTGCAAAAAACGCCGGTCCCGACCCGCGTGTCCGGCCGGTGCGCGCT TCATCCTTCGAGGTTTCCGC
Downstream 100 bases:
>100_bases GCGCGGCCGGCACCGACTATCGCGCCGAGCCGCGCGGCGACGAGGTCTCGCCGCCGGTGCGGGCCTCGATGCGCCTGCCG GCCTCGACGCGCCGCCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSFSMNEKPMSCPRPDAPRRADGIVFHLALGDSWIETVGVPFECRGRVWAVHRSPLVAPDSHPRYTVSDVETGRSFRRVL EPTIEAARAAAIGVIATMPPPVWNKMVRSRDHAQVAA
Sequences:
>Translated_117_residues MSFSMNEKPMSCPRPDAPRRADGIVFHLALGDSWIETVGVPFECRGRVWAVHRSPLVAPDSHPRYTVSDVETGRSFRRVL EPTIEAARAAAIGVIATMPPPVWNKMVRSRDHAQVAA >Mature_116_residues SFSMNEKPMSCPRPDAPRRADGIVFHLALGDSWIETVGVPFECRGRVWAVHRSPLVAPDSHPRYTVSDVETGRSFRRVLE PTIEAARAAAIGVIATMPPPVWNKMVRSRDHAQVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12947; Mature: 12816
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSMNEKPMSCPRPDAPRRADGIVFHLALGDSWIETVGVPFECRGRVWAVHRSPLVAPD CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHCCCCEECCCCEEEEECCCCCCCC SHPRYTVSDVETGRSFRRVLEPTIEAARAAAIGVIATMPPPVWNKMVRSRDHAQVAA CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure SFSMNEKPMSCPRPDAPRRADGIVFHLALGDSWIETVGVPFECRGRVWAVHRSPLVAPD CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHCCCCEECCCCEEEEECCCCCCCC SHPRYTVSDVETGRSFRRVLEPTIEAARAAAIGVIATMPPPVWNKMVRSRDHAQVAA CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA