Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is yfeT [C]

Identifier: 238025145

GI number: 238025145

Start: 2260028

End: 2260888

Strand: Reverse

Name: yfeT [C]

Synonym: bglu_2g18100

Alternate gene names: 238025145

Gene position: 2260888-2260028 (Counterclockwise)

Preceding gene: 238025146

Following gene: 238025144

Centisome position: 79.97

GC content: 71.2

Gene sequence:

>861_bases
ATGCCCGCCAATTTCGACGAACTCGCGTCCCTGATCCGGGCGCAATTTTCCGAGCTGAGCCCGCAGTTCCAGGCCGGCGC
CGCGTTTCTGCTCGATCACCCGGACGAGGTCGCGGTGTCGTCGATGCGCAAGCTCGCACAGCGCGCACAGGTGCAGCCGG
CCTCGCTGGTGCGGCTCGCGCAGCAGTTCGGCTTTCCCGGCTGGAACGAGTTGCGCGACCTGTTCGTGGCGCGCGTGCGC
GCACGGCCGGCGCCGATGACGCAGCGCGCGCGCTCGCTCGTGAAGCCGGGCGCGAAGGCCGCGCTGTCGCACGATCTGCT
GGCCGCGCAGCAGCAGAACCTGGCCGACGCGGCCGCGCGCAACCAACGCGCGCTGGCCGAGGCGGCGCGGCTGATCCGCA
AGGCGCCGCACGTCCACGTGGCGGGCTTTCGCTCCTGCTATCCGGTGGCGTTCGGGTTCGTCTATGCGTACCGGCTGTTC
CGGCCCAGCGTGTCGCTGCTCGCGGGCGTGGCGGGTTCGCTCGAGATGGAGCTGCGCGCGATCGGCCAGGCCAGCGTGAC
GGTGATCGTCAGCTTCGCGCCTTACTCGACCGAGGCAACGCGGGTGGCGAACATCGCGCGCGAGCGCGGCAGCCGGATCG
TGGCGATCACCGACAGCGCCGCGTCGCCGGTCGCGCTGGCTGCCGATGCGACGCTGATCTTCGGGCACGACAGCCCATCG
TTCTTTCCTTCGCTGGTGGCCGCGCACGCGCTCGCAGAGGCACTGGTCGCCCAGTTGCTGGCGCTGGAAGGCGGCGGGGC
CGTGGCCGCGCTCGAACGCAGTGAAGCGGAACTGCATGCGCGCGGTGCCTACACGGGCTGA

Upstream 100 bases:

>100_bases
CGCGTCGTGCCCGGCACCCCGCCGGCGCTCCGCCGGCGCCCCGGCGGGCGGCGCGCGACCCGGTGATACCATGAGCGCCC
CGCTCAAGCCGCTCGTGACC

Downstream 100 bases:

>100_bases
ACCGCGCCGCGTCTGCCGACATCCCGGGATCGTTTCCCGGGTGGCGGACGAATGTCACGGCGAGAAAAATATCGATATTC
TCAGCGCCGAGCTTTTTCAA

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; Sugar Isomerase; SIS Family Regulator; Bifunctional Protein Glk; Transcription Regulator Protein; GlvR Family Transcriptional Regulator; RpiR Family Regulatory; Transcriptional Regulator Protein; SIS Domain-Containing Protein; SIS Domain Protein; Transcriptional Regulator RpiR Family Protein

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPANFDELASLIRAQFSELSPQFQAGAAFLLDHPDEVAVSSMRKLAQRAQVQPASLVRLAQQFGFPGWNELRDLFVARVR
ARPAPMTQRARSLVKPGAKAALSHDLLAAQQQNLADAAARNQRALAEAARLIRKAPHVHVAGFRSCYPVAFGFVYAYRLF
RPSVSLLAGVAGSLEMELRAIGQASVTVIVSFAPYSTEATRVANIARERGSRIVAITDSAASPVALAADATLIFGHDSPS
FFPSLVAAHALAEALVAQLLALEGGGAVAALERSEAELHARGAYTG

Sequences:

>Translated_286_residues
MPANFDELASLIRAQFSELSPQFQAGAAFLLDHPDEVAVSSMRKLAQRAQVQPASLVRLAQQFGFPGWNELRDLFVARVR
ARPAPMTQRARSLVKPGAKAALSHDLLAAQQQNLADAAARNQRALAEAARLIRKAPHVHVAGFRSCYPVAFGFVYAYRLF
RPSVSLLAGVAGSLEMELRAIGQASVTVIVSFAPYSTEATRVANIARERGSRIVAITDSAASPVALAADATLIFGHDSPS
FFPSLVAAHALAEALVAQLLALEGGGAVAALERSEAELHARGAYTG
>Mature_285_residues
PANFDELASLIRAQFSELSPQFQAGAAFLLDHPDEVAVSSMRKLAQRAQVQPASLVRLAQQFGFPGWNELRDLFVARVRA
RPAPMTQRARSLVKPGAKAALSHDLLAAQQQNLADAAARNQRALAEAARLIRKAPHVHVAGFRSCYPVAFGFVYAYRLFR
PSVSLLAGVAGSLEMELRAIGQASVTVIVSFAPYSTEATRVANIARERGSRIVAITDSAASPVALAADATLIFGHDSPSF
FPSLVAAHALAEALVAQLLALEGGGAVAALERSEAELHARGAYTG

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30378; Mature: 30247

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANFDELASLIRAQFSELSPQFQAGAAFLLDHPDEVAVSSMRKLAQRAQVQPASLVRLA
CCCCHHHHHHHHHHHHHHCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHH
QQFGFPGWNELRDLFVARVRARPAPMTQRARSLVKPGAKAALSHDLLAAQQQNLADAAAR
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NQRALAEAARLIRKAPHVHVAGFRSCYPVAFGFVYAYRLFRPSVSLLAGVAGSLEMELRA
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
IGQASVTVIVSFAPYSTEATRVANIARERGSRIVAITDSAASPVALAADATLIFGHDSPS
CCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCEEEEEECCCCH
FFPSLVAAHALAEALVAQLLALEGGGAVAALERSEAELHARGAYTG
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PANFDELASLIRAQFSELSPQFQAGAAFLLDHPDEVAVSSMRKLAQRAQVQPASLVRLA
CCCHHHHHHHHHHHHHHCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHH
QQFGFPGWNELRDLFVARVRARPAPMTQRARSLVKPGAKAALSHDLLAAQQQNLADAAAR
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NQRALAEAARLIRKAPHVHVAGFRSCYPVAFGFVYAYRLFRPSVSLLAGVAGSLEMELRA
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
IGQASVTVIVSFAPYSTEATRVANIARERGSRIVAITDSAASPVALAADATLIFGHDSPS
CCCCEEEEEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCEEEEEECCCCH
FFPSLVAAHALAEALVAQLLALEGGGAVAALERSEAELHARGAYTG
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA